RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 ERHP84090 104 aaKnown RBP12.9□□□□□ -0.34
VARS2-207ENST00000476162 PRB3Q04118 309 aaPredicted RBP12.9□□□□□ -0.34
VARS2-207ENST00000476162 FAM78BQ5VT40 261 aa12.9□□□□□ -0.34
VARS2-207ENST00000476162 OR4B1Q8NGF8 309 aa12.9□□□□□ -0.34
VARS2-207ENST00000476162 OR4P4Q8NGL7 312 aa12.9□□□□□ -0.34
VARS2-207ENST00000476162 VSTM2AQ8TAG5 236 aa12.9□□□□□ -0.34
VARS2-207ENST00000476162 RITA1Q96K30 269 aa12.9□□□□□ -0.34
VARS2-207ENST00000476162 CSTL1Q9H114 145 aa12.9□□□□□ -0.34
VARS2-207ENST00000476162 YTHDF2Q9Y5A9 579 aaKnown RBP12.9□□□□□ -0.34
VARS2-207ENST00000476162 ABCA4P78363 2273 aa12.9□□□□□ -0.34
VARS2-207ENST00000476162 ATRXP46100 2492 aa12.9□□□□□ -0.34
VARS2-207ENST00000476162 CGB1A6NKQ9 187 aa12.9□□□□□ -0.34
VARS2-207ENST00000476162 CD69Q07108 199 aa12.9□□□□□ -0.34
VARS2-207ENST00000476162 MIR17HGQ75NE6 70 aa12.9□□□□□ -0.34
VARS2-207ENST00000476162 OR4A5Q8NH83 315 aa12.9□□□□□ -0.34
VARS2-207ENST00000476162 ZNF430Q9H8G1 570 aaPredicted RBP12.9□□□□□ -0.34
VARS2-207ENST00000476162 IGHV3-72A0A0B4J1Y9 119 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 A0A0U1RQK1 487 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 ZNF320A2RRD8 509 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 HSBP1L1C9JCN9 74 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 TMEM238C9JI98 176 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 ADORA2A-AS1P86434 159 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 WT1-ASQ06250 92 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 ZNF672Q499Z4 452 aaPredicted RBP12.89□□□□□ -0.35
VARS2-207ENST00000476162 ZNF841Q6ZN19 808 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 Q6ZVH6 145 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 TXNDC17Q9BRA2 123 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 UQCR10Q9UDW1 63 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 MALRD1Q5VYJ5 2156 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 TMEM238LA0A1B0GVL6 79 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 ENSAO43768 121 aaKnown RBP12.89□□□□□ -0.35
VARS2-207ENST00000476162 SLC25A17O43808 307 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 MC5RP33032 325 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 PPOXP50336 477 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 FBLN7Q53RD9 439 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 VPS25Q9BRG1 176 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 TPSG1Q9NRR2 321 aa12.89□□□□□ -0.35
VARS2-207ENST00000476162 SCO2A0A1W2PP80 73 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 PGPEP1LA6NFU8 196 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 M0QZ24 198 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 DLL1O00548 723 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 ADMP35318 185 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 Q8N976 141 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 ZNF114Q8NC26 417 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 OR4C5Q8NGB2 326 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 OR2T6Q8NHC8 308 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 BTF3L4Q96K17 158 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 IGHV2-26A0A0B4J1V2 119 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 GRIFINA4D1Z8 144 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 INS-IGF2F8WCM5 200 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 UNQ5815/PRO19632Q6UWF5 114 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 OR5AU1Q8NGC0 362 aa12.88□□□□□ -0.35
VARS2-207ENST00000476162 LRBAP50851 2863 aa12.87□□□□□ -0.35
VARS2-207ENST00000476162 TRBV20OR9-2A0A075B6H5 130 aa12.87□□□□□ -0.35
VARS2-207ENST00000476162 PRSS47A8MTI9 375 aa12.87□□□□□ -0.35
VARS2-207ENST00000476162 HYPMO75409 117 aa12.87□□□□□ -0.35
VARS2-207ENST00000476162 IGLC2P0DOY2 106 aa12.87□□□□□ -0.35
VARS2-207ENST00000476162 IGLC3P0DOY3 106 aa12.87□□□□□ -0.35
VARS2-207ENST00000476162 VMA21Q3ZAQ7 101 aa12.87□□□□□ -0.35
VARS2-207ENST00000476162 CACNG8Q8WXS5 425 aa12.87□□□□□ -0.35
VARS2-207ENST00000476162 SPTBN4Q9H254 2564 aa12.87□□□□□ -0.35
VARS2-207ENST00000476162 MT-CO2P00403 227 aa12.86□□□□□ -0.35
VARS2-207ENST00000476162 HLA-DRB5Q30154 266 aa12.86□□□□□ -0.35
VARS2-207ENST00000476162 SPATA45Q537H7 98 aa12.86□□□□□ -0.35
VARS2-207ENST00000476162 Q6ZN92 141 aa12.86□□□□□ -0.35
VARS2-207ENST00000476162 LY6HO94772 140 aa12.86□□□□□ -0.35
VARS2-207ENST00000476162 IGLV1-47P01700 117 aa12.86□□□□□ -0.35
VARS2-207ENST00000476162 C1QTNF9P0C862 333 aa12.86□□□□□ -0.35
VARS2-207ENST00000476162 HNRNPA3P51991 378 aaKnown RBP12.86□□□□□ -0.35
VARS2-207ENST00000476162 YPEL3P61236 119 aaPredicted RBP12.86□□□□□ -0.35
VARS2-207ENST00000476162 PSG5Q15238 335 aa12.86□□□□□ -0.35
VARS2-207ENST00000476162 MRGPRG-AS1Q2M3A8 158 aa12.86□□□□□ -0.35
VARS2-207ENST00000476162 RNF2Q99496 336 aa12.86□□□□□ -0.35
VARS2-207ENST00000476162 SERF1AO75920 110 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 S100A7P31151 101 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 LGALS7P47929 136 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 PRRX1P54821 245 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 FOXL1Q12952 345 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 TNFRSF14Q92956 283 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 TXN2Q99757 166 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 FNDC4Q9H6D8 234 aaPredicted RBP12.85□□□□□ -0.35
VARS2-207ENST00000476162 PLXNB1O43157 2135 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 TRAV30A0A087WSZ9 112 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 PPIAL4CA0A0B4J2A2 164 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 IGHV3-48P01763 117 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 PPIAL4GP0DN37 164 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 SUMO1P63165 101 aaKnown RBP12.85□□□□□ -0.35
VARS2-207ENST00000476162 SSBP2P81877 361 aaPredicted RBP12.85□□□□□ -0.35
VARS2-207ENST00000476162 ZNF503Q96F45 646 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 NUDT11Q96G61 164 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 FBXL7Q9UJT9 491 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 RNF114Q9Y508 228 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 NAV3Q8IVL0 2385 aa12.85□□□□□ -0.35
VARS2-207ENST00000476162 A0A1W2PPI3 338 aa12.84□□□□□ -0.35
VARS2-207ENST00000476162 FSTL3O95633 263 aa12.84□□□□□ -0.35
VARS2-207ENST00000476162 REG1AP05451 166 aa12.84□□□□□ -0.35
VARS2-207ENST00000476162 RPL19P84098 196 aaKnown RBP12.84□□□□□ -0.35
VARS2-207ENST00000476162 CLEC7AQ9BXN2 247 aa12.84□□□□□ -0.35
VARS2-207ENST00000476162 TECRQ9NZ01 308 aaKnown RBP12.84□□□□□ -0.35
VARS2-207ENST00000476162 RPH3ALQ9UNE2 315 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms