RNA–Protein interactions for RNA: ENST00000476085.1

MSH5-SAPCD1-205, Transcript of MSH5-SAPCD1 readthrough (NMD candidate), humanhuman

APPRIS ALT2 TSL 2

Gene MSH5-SAPCD1, Length 950 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-SAPCD1-205ENST00000476085 DEDDO75618 318 aa8.9□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 CA1P00915 261 aaPredicted RBP8.9□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 SURF2Q15527 256 aaPredicted RBP8.9□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 CSNK1G2-AS1Q8NCQ2 148 aa8.9□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 MARCH1Q8TCQ1 289 aa8.9□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 TMEM170AQ8WVE7 144 aa8.9□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 SCGB3A2Q96PL1 93 aa8.9□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 HRH4Q9H3N8 390 aa8.9□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 TMEM231Q9H6L2 316 aa8.9□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 SCP2D1Q9UJQ7 156 aa8.9□□□□□ -0.98
MSH5-SAPCD1-205ENST00000476085 HECTD4Q9Y4D8 3996 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 TRAV30A0A087WSZ9 112 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 TEX13DA0A0J9YY54 714 aaPredicted RBP8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 OR5AC1P0C628 307 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 IGLC1P0CG04 106 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 RBMY1A1P0DJD3 496 aaKnown RBP8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 RBMY1CP0DJD4 496 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 OPRK1P41145 380 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 P2RY1P47900 373 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 TCTAP57738 103 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 PRR20EP86478 221 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 PRR20CP86479 221 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 PRR20DP86480 221 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 PRR20BP86481 221 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 PRR20AP86496 221 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 RBMY1FQ15415 496 aaKnown RBP8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 RBMS2Q15434 407 aaKnown RBP8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 TIGITQ495A1 244 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 C2orf83Q53S99 150 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 PRSS54Q6PEW0 395 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 CCDC190Q86UF4 302 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 SELENOHQ8IZQ5 122 aaKnown RBP8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 RRNAD1Q96FB5 475 aaKnown RBP8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 METTL26Q96S19 204 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 GPR132Q9UNW8 380 aa8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 C14orf166Q9Y224 244 aaKnown RBP8.89□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 DEFB4AO15263 64 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 NXPH3O95157 252 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 HTR2BP41595 481 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 HOXA1P49639 335 aaPredicted RBP8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 YPEL3P61236 119 aaPredicted RBP8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 RPL11P62913 178 aaKnown RBP8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 TRIM16LQ309B1 348 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 TMEM41BQ5BJD5 291 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 C16orf54Q6UWD8 224 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 STHQ8IWL8 128 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 TOMM5Q8N4H5 51 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 OR4C16Q8NGL9 310 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 C2CD4CQ8TF44 421 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 GLMPQ8WWB7 406 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 RBPMSQ93062 196 aaKnown RBP8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 GPR146Q96CH1 333 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 PDCD10Q9BUL8 212 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 APLNQ9ULZ1 77 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 TMEM56-RWDD3S4R434 201 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 V9GYH0 126 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 X6R8D5 127 aa8.88□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 CRYM-AS1A6NIL9 109 aa8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 IFNA4P05014 189 aa8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 SPP1P10451 314 aa8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 C4BPBP20851 252 aa8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 NMSQ5H8A3 153 aa8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 FAAP20Q6NZ36 180 aa8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 MORN3Q6PF18 240 aaPredicted RBP8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 OR1S2Q8NGQ3 325 aa8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 RNASEH2CQ8TDP1 164 aaKnown RBP8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 TMEM230Q96A57 120 aa8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 KRTAP17-1Q9BYP8 105 aa8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 NAA60Q9H7X0 242 aa8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 SEPSECSQ9HD40 501 aaKnown RBP8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 ENY2Q9NPA8 101 aa8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 MCUBQ9NWR8 336 aa8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 FBXL17Q9UF56 701 aa8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 RABAC1Q9UI14 185 aa8.87□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 ELOA3CA0A087WX78 387 aaPredicted RBP8.86□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 IGHV4-28A0A0C4DH34 117 aa8.86□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 KNCNA6PVL3 124 aa8.86□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 ZNF688P0C7X2 276 aa8.86□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 SLC25A4P12235 298 aa8.86□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 MIFP14174 115 aa8.86□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 INPP1P49441 399 aa8.86□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 DHODHQ02127 395 aa8.86□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 STXBP6Q8NFX7 210 aa8.86□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 OR51S1Q8NGJ8 323 aa8.86□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 CACNG5Q9UF02 275 aa8.86□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 PIGBOS1A0A0B4J2F0 54 aa8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 RPS10-NUDT3A0A1W2PQS6 291 aa8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 C11orf94C9JXX5 98 aa8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 BUB3O43684 328 aa8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 HNRNPCP07910 306 aaKnown RBP eCLIP8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 OR10J1P30954 320 aa8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 RND2P52198 227 aa8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 USF2Q15853 346 aaPredicted RBP8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 ZNF79Q15937 498 aa8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 LINC00299Q6ZSB3 139 aa8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 Q8WTZ3 238 aa8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 IL22RA2Q969J5 263 aa8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 TRIM63Q969Q1 353 aa8.85□□□□□ -0.99
MSH5-SAPCD1-205ENST00000476085 RAB40CQ96S21 281 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms