RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 CACNG5Q9UF02 275 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 FBXL17Q9UF56 701 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 RABAC1Q9UI14 185 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 APLNQ9ULZ1 77 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 TMEM56-RWDD3S4R434 201 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 X6R8D5 127 aa5.09□□□□□ -1.59
HDAC3-207ENST00000475549 HERC2O95714 4834 aa5.09□□□□□ -1.6
HDAC3-207ENST00000475549 IGHV4-28A0A0C4DH34 117 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 A0A1W2PS18 150 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 CRYM-AS1A6NIL9 109 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 ZNF705EA8MWA4 302 aaPredicted RBP5.08□□□□□ -1.6
HDAC3-207ENST00000475549 CORTO00230 105 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 B3GALNT1O75752 331 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 ATG12O94817 140 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 ZNF688P0C7X2 276 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 HTR2BP41595 481 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 RND2P52198 227 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 YPEL3P61236 119 aaPredicted RBP5.08□□□□□ -1.6
HDAC3-207ENST00000475549 DHODHQ02127 395 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 SSBP1Q04837 148 aaKnown RBP5.08□□□□□ -1.6
HDAC3-207ENST00000475549 SURF2Q15527 256 aaPredicted RBP5.08□□□□□ -1.6
HDAC3-207ENST00000475549 USF2Q15853 346 aaPredicted RBP5.08□□□□□ -1.6
HDAC3-207ENST00000475549 C2orf83Q53S99 150 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 ACTL10Q5JWF8 245 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 C16orf54Q6UWD8 224 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 GSG1LQ6UXU4 331 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 FAM219AQ8IW50 185 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 CCDC71LQ8N9Z2 235 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 STXBP6Q8NFX7 210 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 OR51S1Q8NGJ8 323 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 OR4C16Q8NGL9 310 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 C15orf40Q8WUR7 153 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 SMIM4Q8WVI0 70 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 GLMPQ8WWB7 406 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 NPIPB3Q92617 1050 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 RBPMSQ93062 196 aaKnown RBP5.08□□□□□ -1.6
HDAC3-207ENST00000475549 GRAMD2BQ96HH9 432 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 METTL26Q96S19 204 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 RAB40CQ96S21 281 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 SOSTQ9BQB4 213 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 PDCD10Q9BUL8 212 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 CLEC5AQ9NY25 188 aa5.08□□□□□ -1.6
HDAC3-207ENST00000475549 DNAH10Q8IVF4 4471 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 TRAV30A0A087WSZ9 112 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 CTDSPLO15194 276 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 RGS5O15539 181 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 BUB3O43684 328 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 IFNA4P05014 189 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 OR10J1P30954 320 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 SUPT4H1P63272 117 aaKnown RBP5.07□□□□□ -1.6
HDAC3-207ENST00000475549 TMEM268Q5VZI3 342 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 LYZL2Q7Z4W2 148 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 STHQ8IWL8 128 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 SLC24A4Q8NFF2 622 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 DYNC2LI1Q8TCX1 351 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 RNASEH2CQ8TDP1 164 aaKnown RBP5.07□□□□□ -1.6
HDAC3-207ENST00000475549 C2CD4CQ8TF44 421 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 SCRT1Q9BWW7 348 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 ENY2Q9NPA8 101 aa5.07□□□□□ -1.6
HDAC3-207ENST00000475549 HEYLQ9NQ87 328 aaPredicted RBP5.07□□□□□ -1.6
HDAC3-207ENST00000475549 KIAA1109Q2LD37 5005 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 IGKV1D-37A0A075B6S9 117 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 ANKRD20A5PA0PJZ0 165 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 CEBPZOSA8MTT3 80 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 DISC1C4P0D8 188 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 FAM90A26D6RGX4 464 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 EREGO14944 169 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 IL4P05112 153 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 HNRNPCP07910 306 aaKnown RBP eCLIP5.06□□□□□ -1.6
HDAC3-207ENST00000475549 AKAIN1P0CW23 69 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 RD3LP0DJH9 198 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 SPP1P10451 314 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 PSG1P11464 419 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 SLC25A4P12235 298 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 HLA-DMBP28068 263 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 DEFB1P60022 68 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 MRPS10P82664 201 aaKnown RBP5.06□□□□□ -1.6
HDAC3-207ENST00000475549 ZNF90Q03938 601 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 DHRS2Q13268 280 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 C12orf74Q32Q52 190 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 PSMG4Q5JS54 123 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 GDF5OSQ5U4N7 250 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 Q6ZTC4 211 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 GPR141Q7Z602 305 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 OR1S2Q8NGQ3 325 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 RNASE11Q8TAA1 199 aaKnown RBP5.06□□□□□ -1.6
HDAC3-207ENST00000475549 Q8WTZ3 238 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 DIRAS2Q96HU8 199 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 C17orf77Q96MU5 243 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 WDR12Q9GZL7 423 aaKnown RBP5.06□□□□□ -1.6
HDAC3-207ENST00000475549 SLIRPQ9GZT3 109 aaKnown RBP5.06□□□□□ -1.6
HDAC3-207ENST00000475549 MFFQ9GZY8 342 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 HRH4Q9H3N8 390 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 TMEM231Q9H6L2 316 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 CELA1Q9UNI1 258 aa5.06□□□□□ -1.6
HDAC3-207ENST00000475549 C14orf166Q9Y224 244 aaKnown RBP5.06□□□□□ -1.6
HDAC3-207ENST00000475549 HECTD4Q9Y4D8 3996 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 RPS10-NUDT3A0A1W2PQS6 291 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 HELTA6NFD8 242 aa5.05□□□□□ -1.6
HDAC3-207ENST00000475549 IGLL5B9A064 214 aa5.05□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms