RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 ZNF355PQ9NSJ1 428 aa17.27■□□□□ 0.36
CCM2-206ENST00000474617 NPFFO15130 113 aa17.26■□□□□ 0.35
CCM2-206ENST00000474617 IGLC1P0CG04 106 aa17.26■□□□□ 0.35
CCM2-206ENST00000474617 C16orf82Q7Z2V1 217 aa17.26■□□□□ 0.35
CCM2-206ENST00000474617 FAM210BQ96KR6 192 aa17.26■□□□□ 0.35
CCM2-206ENST00000474617 RASL11BQ9BPW5 248 aa17.26■□□□□ 0.35
CCM2-206ENST00000474617 PYGO2Q9BRQ0 406 aa17.26■□□□□ 0.35
CCM2-206ENST00000474617 OR51M1Q9H341 326 aa17.26■□□□□ 0.35
CCM2-206ENST00000474617 MRPL36Q9P0J6 103 aaKnown RBP17.26■□□□□ 0.35
CCM2-206ENST00000474617 RNF24Q9Y225 148 aa17.26■□□□□ 0.35
CCM2-206ENST00000474617 CFAP46Q8IYW2 2715 aa17.26■□□□□ 0.35
CCM2-206ENST00000474617 SCO2A0A1W2PP80 73 aa17.26■□□□□ 0.35
CCM2-206ENST00000474617 NCBP2LA6PVI3 153 aaKnown RBP17.26■□□□□ 0.35
CCM2-206ENST00000474617 HIST1H1BP16401 226 aaKnown RBP17.26■□□□□ 0.35
CCM2-206ENST00000474617 RPS10P46783 165 aaKnown RBP17.26■□□□□ 0.35
CCM2-206ENST00000474617 ATP5J2P56134 94 aa17.26■□□□□ 0.35
CCM2-206ENST00000474617 CX3CL1P78423 397 aa17.26■□□□□ 0.35
CCM2-206ENST00000474617 LINC00305Q7Z4B0 112 aa17.26■□□□□ 0.35
CCM2-206ENST00000474617 SAA4P35542 130 aa17.25■□□□□ 0.35
CCM2-206ENST00000474617 KLK9Q2XQG4 91 aa17.25■□□□□ 0.35
CCM2-206ENST00000474617 PATE2Q6UY27 113 aa17.25■□□□□ 0.35
CCM2-206ENST00000474617 DYNAPQ8N1N2 210 aa17.25■□□□□ 0.35
CCM2-206ENST00000474617 KLK9Q9UKQ9 250 aa17.25■□□□□ 0.35
CCM2-206ENST00000474617 MDFIC2A0A1B0GVS7 189 aa17.24■□□□□ 0.35
CCM2-206ENST00000474617 K7EIM0 57 aa17.24■□□□□ 0.35
CCM2-206ENST00000474617 PFN1P07737 140 aaKnown RBP17.24■□□□□ 0.35
CCM2-206ENST00000474617 GALR1P47211 349 aa17.24■□□□□ 0.35
CCM2-206ENST00000474617 DMRT1Q9Y5R6 373 aa17.24■□□□□ 0.35
CCM2-206ENST00000474617 IGLV11-55A0A075B6I3 123 aa17.23■□□□□ 0.35
CCM2-206ENST00000474617 A0A1W2PRD5 423 aa17.23■□□□□ 0.35
CCM2-206ENST00000474617 A0A1W2PRF3 423 aa17.23■□□□□ 0.35
CCM2-206ENST00000474617 A0A1W2PRM7 423 aa17.23■□□□□ 0.35
CCM2-206ENST00000474617 GATA3P23771 443 aa17.23■□□□□ 0.35
CCM2-206ENST00000474617 S100A7P31151 101 aa17.23■□□□□ 0.35
CCM2-206ENST00000474617 TAS2R60P59551 318 aa17.23■□□□□ 0.35
CCM2-206ENST00000474617 AJUBAQ96IF1 538 aa17.23■□□□□ 0.35
CCM2-206ENST00000474617 HIGD1AQ9Y241 93 aa17.23■□□□□ 0.35
CCM2-206ENST00000474617 URGCP-MRPS24S4R325 110 aa17.23■□□□□ 0.35
CCM2-206ENST00000474617 TRAV9-1A0A075B6T8 112 aa17.22■□□□□ 0.35
CCM2-206ENST00000474617 HELTA6NFD8 242 aa17.22■□□□□ 0.35
CCM2-206ENST00000474617 YPEL3P61236 119 aaPredicted RBP17.22■□□□□ 0.35
CCM2-206ENST00000474617 KIAA0141Q14154 515 aaPredicted RBP17.22■□□□□ 0.35
CCM2-206ENST00000474617 ZNF343Q6P1L6 599 aa17.22■□□□□ 0.35
CCM2-206ENST00000474617 OR1B1Q8NGR6 318 aa17.22■□□□□ 0.35
CCM2-206ENST00000474617 SFRP2Q96HF1 295 aa17.22■□□□□ 0.35
CCM2-206ENST00000474617 TXN2Q99757 166 aa17.22■□□□□ 0.35
CCM2-206ENST00000474617 TMEM14CQ9P0S9 112 aa17.22■□□□□ 0.35
CCM2-206ENST00000474617 CXCL1P09341 107 aa17.21■□□□□ 0.35
CCM2-206ENST00000474617 RD3LP0DJH9 198 aa17.21■□□□□ 0.35
CCM2-206ENST00000474617 COX6B1P14854 86 aa17.21■□□□□ 0.35
CCM2-206ENST00000474617 SLC25A16P16260 332 aa17.21■□□□□ 0.35
CCM2-206ENST00000474617 ORM2P19652 201 aa17.21■□□□□ 0.35
CCM2-206ENST00000474617 FCGR2BP31994 310 aaPredicted RBP17.21■□□□□ 0.35
CCM2-206ENST00000474617 RPL35P42766 123 aaKnown RBP17.21■□□□□ 0.35
CCM2-206ENST00000474617 MFAP4P55083 255 aa17.21■□□□□ 0.35
CCM2-206ENST00000474617 ZNF843Q8N446 348 aa17.21■□□□□ 0.35
CCM2-206ENST00000474617 Q8N9W7 124 aa17.21■□□□□ 0.35
CCM2-206ENST00000474617 C2CD4CQ8TF44 421 aa17.21■□□□□ 0.35
CCM2-206ENST00000474617 RBM14Q96PK6 669 aaKnown RBP17.21■□□□□ 0.35
CCM2-206ENST00000474617 ARHGAP32A7KAX9 2087 aa17.21■□□□□ 0.35
CCM2-206ENST00000474617 TGIF2-C20orf24A0A0A6YYL0 155 aa17.21■□□□□ 0.34
CCM2-206ENST00000474617 CENPVL3A0A0U1RRI6 287 aa17.21■□□□□ 0.34
CCM2-206ENST00000474617 GGCTO75223 188 aaKnown RBP17.21■□□□□ 0.34
CCM2-206ENST00000474617 TOMM40O96008 361 aa17.21■□□□□ 0.34
CCM2-206ENST00000474617 IGHV3-48P01763 117 aa17.21■□□□□ 0.34
CCM2-206ENST00000474617 S100A9P06702 114 aaKnown RBP17.21■□□□□ 0.34
CCM2-206ENST00000474617 APELAP0DMC3 54 aa17.21■□□□□ 0.34
CCM2-206ENST00000474617 GNG4P50150 75 aa17.21■□□□□ 0.34
CCM2-206ENST00000474617 FOXL1Q12952 345 aa17.21■□□□□ 0.34
CCM2-206ENST00000474617 FXYD5Q96DB9 178 aa17.21■□□□□ 0.34
CCM2-206ENST00000474617 DERL1Q9BUN8 251 aa17.21■□□□□ 0.34
CCM2-206ENST00000474617 SRD5A3Q9H8P0 318 aa17.21■□□□□ 0.34
CCM2-206ENST00000474617 IGHV1-69DA0A0B4J2H0 117 aa17.2■□□□□ 0.34
CCM2-206ENST00000474617 IGHV4-61A0A0C4DH41 118 aa17.2■□□□□ 0.34
CCM2-206ENST00000474617 C5orf52A6NGY3 159 aa17.2■□□□□ 0.34
CCM2-206ENST00000474617 GGTLC3B5MD39 225 aa17.2■□□□□ 0.34
CCM2-206ENST00000474617 IGHV1-69P01742 117 aa17.2■□□□□ 0.34
CCM2-206ENST00000474617 OR10J4P0C629 311 aa17.2■□□□□ 0.34
CCM2-206ENST00000474617 TIGITQ495A1 244 aa17.2■□□□□ 0.34
CCM2-206ENST00000474617 SMIM12Q96EX1 92 aa17.2■□□□□ 0.34
CCM2-206ENST00000474617 PLXNB1O43157 2135 aa17.2■□□□□ 0.34
CCM2-206ENST00000474617 DCHS2Q6V1P9 2916 aa17.19■□□□□ 0.34
CCM2-206ENST00000474617 USP24Q9UPU5 2620 aa17.19■□□□□ 0.34
CCM2-206ENST00000474617 IGHV7-81A0A0B4J1V7 117 aa17.19■□□□□ 0.34
CCM2-206ENST00000474617 TYMSP04818 313 aa17.19■□□□□ 0.34
CCM2-206ENST00000474617 PSG1P11464 419 aa17.19■□□□□ 0.34
CCM2-206ENST00000474617 CD24P25063 80 aa17.19■□□□□ 0.34
CCM2-206ENST00000474617 FAM3BP58499 235 aaPredicted RBP17.19■□□□□ 0.34
CCM2-206ENST00000474617 SUMO1P63165 101 aaKnown RBP17.19■□□□□ 0.34
CCM2-206ENST00000474617 SGMS2Q8NHU3 365 aa17.19■□□□□ 0.34
CCM2-206ENST00000474617 SAV1Q9H4B6 383 aaPredicted RBP17.19■□□□□ 0.34
CCM2-206ENST00000474617 GAR1Q9NY12 217 aaKnown RBP17.19■□□□□ 0.34
CCM2-206ENST00000474617 CDC42EP3Q9UKI2 254 aa17.19■□□□□ 0.34
CCM2-206ENST00000474617 TRBV20OR9-2A0A075B6H5 130 aa17.18■□□□□ 0.34
CCM2-206ENST00000474617 PPP5D1E7EU14 171 aa17.18■□□□□ 0.34
CCM2-206ENST00000474617 IGKV1-17P01599 117 aa17.18■□□□□ 0.34
CCM2-206ENST00000474617 CRYBB3P26998 211 aa17.18■□□□□ 0.34
CCM2-206ENST00000474617 ZFP82Q8N141 532 aa17.18■□□□□ 0.34
CCM2-206ENST00000474617 OR10G8Q8NGN5 311 aa17.18■□□□□ 0.34
CCM2-206ENST00000474617 FAM110DQ8TAY7 271 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms