RNA–Protein interactions for RNA: ENST00000474215.5

CKS1B-206, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 3

Gene CKS1B, Length 739 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-206ENST00000474215 APOC4P55056 127 aa8.3□□□□□ -1.08
CKS1B-206ENST00000474215 ATP5IP56385 69 aaPredicted RBP8.3□□□□□ -1.08
CKS1B-206ENST00000474215 PAFAH1B2P68402 229 aa8.3□□□□□ -1.08
CKS1B-206ENST00000474215 BAK1Q16611 211 aa8.3□□□□□ -1.08
CKS1B-206ENST00000474215 TIGITQ495A1 244 aa8.3□□□□□ -1.08
CKS1B-206ENST00000474215 GBGT1Q8N5D6 347 aa8.3□□□□□ -1.08
CKS1B-206ENST00000474215 LRTM2Q8N967 370 aa8.3□□□□□ -1.08
CKS1B-206ENST00000474215 NDUFA13Q9P0J0 144 aa8.3□□□□□ -1.08
CKS1B-206ENST00000474215 IGHV3-66A0A0C4DH42 116 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 A0A1W2PS18 150 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 NAP1L6A6NFF2 107 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 UBE2CO00762 179 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 PITX3O75364 302 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 SFT2D2O95562 160 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 IGLC1P0CG04 106 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 CRYBB3P26998 211 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 OR10J1P30954 320 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 YPEL3P61236 119 aaPredicted RBP8.29□□□□□ -1.08
CKS1B-206ENST00000474215 RPL11P62913 178 aaKnown RBP8.29□□□□□ -1.08
CKS1B-206ENST00000474215 PPP1R1AQ13522 171 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 RBMS2Q15434 407 aaKnown RBP8.29□□□□□ -1.08
CKS1B-206ENST00000474215 ZFAND6Q6FIF0 208 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 APRG1Q8IVJ8 170 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 CENPSQ8N2Z9 138 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 OR1S2Q8NGQ3 325 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 Q8WTZ3 238 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 NPIPB3Q92617 1050 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 METTL26Q96S19 204 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 OVOL2Q9BRP0 275 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 TMEM231Q9H6L2 316 aa8.29□□□□□ -1.08
CKS1B-206ENST00000474215 KIR2DL5BA0A0G2JN68 375 aa8.28□□□□□ -1.08
CKS1B-206ENST00000474215 KIR2DL5BA0A0G2JPC4 375 aa8.28□□□□□ -1.08
CKS1B-206ENST00000474215 DNASE2O00115 360 aaPredicted RBP8.28□□□□□ -1.08
CKS1B-206ENST00000474215 IFNA4P05014 189 aa8.28□□□□□ -1.08
CKS1B-206ENST00000474215 SLC25A6P12236 298 aa8.28□□□□□ -1.08
CKS1B-206ENST00000474215 UBE2MP61081 183 aaKnown RBP8.28□□□□□ -1.08
CKS1B-206ENST00000474215 TRIQKQ629K1 86 aa8.28□□□□□ -1.08
CKS1B-206ENST00000474215 Q6ZWC4 215 aa8.28□□□□□ -1.08
CKS1B-206ENST00000474215 WFDC3Q8IUB2 231 aa8.28□□□□□ -1.08
CKS1B-206ENST00000474215 KIR2DL5AQ8N109 375 aa8.28□□□□□ -1.08
CKS1B-206ENST00000474215 STPG3Q8N7X2 389 aa8.28□□□□□ -1.08
CKS1B-206ENST00000474215 KIR2DL5BQ8NHK3 375 aa8.28□□□□□ -1.08
CKS1B-206ENST00000474215 IL17DQ8TAD2 202 aa8.28□□□□□ -1.08
CKS1B-206ENST00000474215 ACY3Q96HD9 319 aa8.28□□□□□ -1.08
CKS1B-206ENST00000474215 NARS2Q96I59 477 aaKnown RBP8.28□□□□□ -1.08
CKS1B-206ENST00000474215 MS4A6AQ9H2W1 248 aa8.28□□□□□ -1.08
CKS1B-206ENST00000474215 TMED3Q9Y3Q3 217 aa8.28□□□□□ -1.08
CKS1B-206ENST00000474215 TRAV2A0A0B4J234 112 aa8.27□□□□□ -1.09
CKS1B-206ENST00000474215 CENPXA8MT69 81 aa8.27□□□□□ -1.09
CKS1B-206ENST00000474215 FAM90A26D6RGX4 464 aa8.27□□□□□ -1.09
CKS1B-206ENST00000474215 NDUFB6O95139 128 aa8.27□□□□□ -1.09
CKS1B-206ENST00000474215 RD3LP0DJH9 198 aa8.27□□□□□ -1.09
CKS1B-206ENST00000474215 RPL35AP18077 110 aaKnown RBP8.27□□□□□ -1.09
CKS1B-206ENST00000474215 GPX4P36969 197 aaPredicted RBP8.27□□□□□ -1.09
CKS1B-206ENST00000474215 ZNF124Q15973 351 aa8.27□□□□□ -1.09
CKS1B-206ENST00000474215 GRAMD2BQ96HH9 432 aa8.27□□□□□ -1.09
CKS1B-206ENST00000474215 SDHCQ99643 169 aaPredicted RBP8.27□□□□□ -1.09
CKS1B-206ENST00000474215 MAP6D1Q9H9H5 199 aa8.27□□□□□ -1.09
CKS1B-206ENST00000474215 TP53TG1Q9Y2A0 90 aa8.27□□□□□ -1.09
CKS1B-206ENST00000474215 U3KQE9 123 aa8.27□□□□□ -1.09
CKS1B-206ENST00000474215 RYR3Q15413 4870 aa8.26□□□□□ -1.09
CKS1B-206ENST00000474215 LINC00854A0A1B0GVQ3 168 aa8.26□□□□□ -1.09
CKS1B-206ENST00000474215 C9orf170A2RU37 121 aa8.26□□□□□ -1.09
CKS1B-206ENST00000474215 SPRY2O43597 315 aa8.26□□□□□ -1.09
CKS1B-206ENST00000474215 MED6O75586 246 aa8.26□□□□□ -1.09
CKS1B-206ENST00000474215 HOXB5P09067 269 aa8.26□□□□□ -1.09
CKS1B-206ENST00000474215 P2RY1P47900 373 aa8.26□□□□□ -1.09
CKS1B-206ENST00000474215 GAMTQ14353 236 aa8.26□□□□□ -1.09
CKS1B-206ENST00000474215 RABAC1Q9UI14 185 aa8.26□□□□□ -1.09
CKS1B-206ENST00000474215 FLVCR2Q9UPI3 526 aa8.26□□□□□ -1.09
CKS1B-206ENST00000474215 TENM2Q9NT68 2774 aa8.26□□□□□ -1.09
CKS1B-206ENST00000474215 SYNGR2O43760 224 aa8.25□□□□□ -1.09
CKS1B-206ENST00000474215 TOMM40O96008 361 aa8.25□□□□□ -1.09
CKS1B-206ENST00000474215 IL4P05112 153 aa8.25□□□□□ -1.09
CKS1B-206ENST00000474215 HNRNPCP07910 306 aaKnown RBP eCLIP8.25□□□□□ -1.09
CKS1B-206ENST00000474215 PSG1P11464 419 aa8.25□□□□□ -1.09
CKS1B-206ENST00000474215 IL7P13232 177 aa8.25□□□□□ -1.09
CKS1B-206ENST00000474215 RAB11AP62491 216 aa8.25□□□□□ -1.09
CKS1B-206ENST00000474215 DEFB135Q30KP9 77 aa8.25□□□□□ -1.09
CKS1B-206ENST00000474215 GGNBP1Q5YKI7 109 aa8.25□□□□□ -1.09
CKS1B-206ENST00000474215 STXBP6Q8NFX7 210 aa8.25□□□□□ -1.09
CKS1B-206ENST00000474215 RNF183Q96D59 192 aa8.25□□□□□ -1.09
CKS1B-206ENST00000474215 CIB3Q96Q77 187 aaPredicted RBP8.25□□□□□ -1.09
CKS1B-206ENST00000474215 C7orf50Q9BRJ6 194 aaKnown RBP8.25□□□□□ -1.09
CKS1B-206ENST00000474215 MAGT1Q9H0U3 335 aa8.25□□□□□ -1.09
CKS1B-206ENST00000474215 CSTL1Q9H114 145 aa8.25□□□□□ -1.09
CKS1B-206ENST00000474215 HELTA6NFD8 242 aa8.24□□□□□ -1.09
CKS1B-206ENST00000474215 ZFP92A6NM28 416 aa8.24□□□□□ -1.09
CKS1B-206ENST00000474215 MPTX1A8MV57 137 aa8.24□□□□□ -1.09
CKS1B-206ENST00000474215 K7EQG2 157 aa8.24□□□□□ -1.09
CKS1B-206ENST00000474215 WRBO00258 174 aa8.24□□□□□ -1.09
CKS1B-206ENST00000474215 ADAP1O75689 374 aa8.24□□□□□ -1.09
CKS1B-206ENST00000474215 OR4E1P0C645 316 aa8.24□□□□□ -1.09
CKS1B-206ENST00000474215 IAPPP10997 89 aa8.24□□□□□ -1.09
CKS1B-206ENST00000474215 BTCP35070 178 aa8.24□□□□□ -1.09
CKS1B-206ENST00000474215 EIF2B2P49770 351 aaKnown RBP8.24□□□□□ -1.09
CKS1B-206ENST00000474215 AP2S1P53680 142 aaPredicted RBP8.24□□□□□ -1.09
CKS1B-206ENST00000474215 DEFB131AP59861 70 aa8.24□□□□□ -1.09
CKS1B-206ENST00000474215 RPP30P78346 268 aaKnown RBP8.24□□□□□ -1.09
CKS1B-206ENST00000474215 USF2Q15853 346 aaPredicted RBP8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms