RNA–Protein interactions for RNA: ENST00000473376.1

CHD3-209, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-209ENST00000473376 PRSS54Q6PEW0 395 aa9.83□□□□□ -0.84
CHD3-209ENST00000473376 C16orf54Q6UWD8 224 aa9.83□□□□□ -0.84
CHD3-209ENST00000473376 CSNK1G2-AS1Q8NCQ2 148 aa9.83□□□□□ -0.84
CHD3-209ENST00000473376 STXBP6Q8NFX7 210 aa9.83□□□□□ -0.84
CHD3-209ENST00000473376 RNASE11Q8TAA1 199 aaKnown RBP9.83□□□□□ -0.84
CHD3-209ENST00000473376 GLMPQ8WWB7 406 aa9.83□□□□□ -0.84
CHD3-209ENST00000473376 RTBDNQ9BSG5 229 aaPredicted RBP9.83□□□□□ -0.84
CHD3-209ENST00000473376 NAA60Q9H7X0 242 aa9.83□□□□□ -0.84
CHD3-209ENST00000473376 MRPL36Q9P0J6 103 aaKnown RBP9.83□□□□□ -0.84
CHD3-209ENST00000473376 APLNQ9ULZ1 77 aa9.83□□□□□ -0.84
CHD3-209ENST00000473376 TRAV10A0A0B4J240 114 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 IGHV3-66A0A0C4DH42 116 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 A0A0G2JRQ6 117 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 DISC1C4P0D8 188 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 CTDSPLO15194 276 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 OR5AC1P0C628 307 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 RBMY1A1P0DJD3 496 aaKnown RBP9.82□□□□□ -0.84
CHD3-209ENST00000473376 RBMY1CP0DJD4 496 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 OR10J1P30954 320 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 PPP5CP53041 499 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 SNRPD3P62318 126 aaKnown RBP9.82□□□□□ -0.84
CHD3-209ENST00000473376 RBMY1FQ15415 496 aaKnown RBP9.82□□□□□ -0.84
CHD3-209ENST00000473376 MLANAQ16655 118 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 SCGB2B2Q4G0G5 96 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 NMSQ5H8A3 153 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 SLC24A4Q8NFF2 622 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 OR4D10Q8NGI6 311 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 MARCH1Q8TCQ1 289 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 SMIM4Q8WVI0 70 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 RAB40CQ96S21 281 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 PRRT1Q99946 306 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 RNF126Q9BV68 326 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 HEYLQ9NQ87 328 aaPredicted RBP9.82□□□□□ -0.84
CHD3-209ENST00000473376 PFDN2Q9UHV9 154 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 GPR132Q9UNW8 380 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 U3KQ87 197 aa9.82□□□□□ -0.84
CHD3-209ENST00000473376 IGHV4-28A0A0C4DH34 117 aa9.81□□□□□ -0.84
CHD3-209ENST00000473376 CRYM-AS1A6NIL9 109 aa9.81□□□□□ -0.84
CHD3-209ENST00000473376 BUB3O43684 328 aa9.81□□□□□ -0.84
CHD3-209ENST00000473376 DEDDO75618 318 aa9.81□□□□□ -0.84
CHD3-209ENST00000473376 ZNF688P0C7X2 276 aa9.81□□□□□ -0.84
CHD3-209ENST00000473376 TIGITQ495A1 244 aa9.81□□□□□ -0.84
CHD3-209ENST00000473376 SELENOHQ8IZQ5 122 aaKnown RBP9.81□□□□□ -0.84
CHD3-209ENST00000473376 CLUHP3Q96NS8 147 aa9.81□□□□□ -0.84
CHD3-209ENST00000473376 SCGB3A2Q96PL1 93 aa9.81□□□□□ -0.84
CHD3-209ENST00000473376 TBC1D24Q9ULP9 559 aa9.81□□□□□ -0.84
CHD3-209ENST00000473376 KCNIP3Q9Y2W7 256 aa9.81□□□□□ -0.84
CHD3-209ENST00000473376 X6R8D5 127 aa9.81□□□□□ -0.84
CHD3-209ENST00000473376 IGLL5B9A064 214 aa9.8□□□□□ -0.84
CHD3-209ENST00000473376 TOMM40O96008 361 aa9.8□□□□□ -0.84
CHD3-209ENST00000473376 AKAIN1P0CW23 69 aa9.8□□□□□ -0.84
CHD3-209ENST00000473376 RND2P52198 227 aa9.8□□□□□ -0.84
CHD3-209ENST00000473376 DHRS2Q13268 280 aa9.8□□□□□ -0.84
CHD3-209ENST00000473376 LINC00336Q6ZUF6 198 aa9.8□□□□□ -0.84
CHD3-209ENST00000473376 LHFPL5Q8TAF8 219 aa9.8□□□□□ -0.84
CHD3-209ENST00000473376 GPR146Q96CH1 333 aa9.8□□□□□ -0.84
CHD3-209ENST00000473376 NEU1Q99519 415 aa9.8□□□□□ -0.84
CHD3-209ENST00000473376 NRN1Q9NPD7 142 aa9.8□□□□□ -0.84
CHD3-209ENST00000473376 CACNG5Q9UF02 275 aa9.8□□□□□ -0.84
CHD3-209ENST00000473376 SMIM9A6NGZ8 99 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 RD3LP0DJH9 198 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 SULT1A3P0DMM9 295 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 SULT1A4P0DMN0 295 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 C4BPBP20851 252 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 NPY1RP25929 384 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 HLA-DMBP28068 263 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 NKX2-1P43699 371 aaPredicted RBP9.79□□□□□ -0.84
CHD3-209ENST00000473376 ACTL10Q5JWF8 245 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 C1orf194Q5T5A4 169 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 SAMD13Q5VXD3 122 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 TMEM268Q5VZI3 342 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 SPATA31B1PQ5VZV4 182 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 OR8G2PQ6IF36 304 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 BCL7BQ9BQE9 202 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 MIXL1Q9H2W2 232 aa9.79□□□□□ -0.84
CHD3-209ENST00000473376 A0A0B4J2A0 478 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 TMEM189A5PLL7 270 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 CEBPZOSA8MTT3 80 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 FAM90A26D6RGX4 464 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 H3BMM0 161 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 DEFB4AO15263 64 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 AMBPP02760 352 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 IL4P05112 153 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 GPX4P36969 197 aaPredicted RBP9.78□□□□□ -0.84
CHD3-209ENST00000473376 CCR6P51684 374 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 SRPXP78539 464 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 PRR20EP86478 221 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 PRR20CP86479 221 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 PRR20DP86480 221 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 PRR20BP86481 221 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 PRR20AP86496 221 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 USF2Q15853 346 aaPredicted RBP9.78□□□□□ -0.84
CHD3-209ENST00000473376 RNASE12Q5GAN4 147 aaKnown RBP9.78□□□□□ -0.84
CHD3-209ENST00000473376 PSMG4Q5JS54 123 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 OR51G1Q8NGK1 321 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 HSPB7Q9UBY9 170 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 SHPKQ9UHJ6 478 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 SCP2D1Q9UJQ7 156 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 FRAS1Q86XX4 4008 aa9.78□□□□□ -0.84
CHD3-209ENST00000473376 ELOA3CA0A087WX78 387 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms