RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 LHFPL1Q86WI0 220 aa8.03□□□□□ -1.12
ACTB-209ENST00000473257 POM121L12Q8N7R1 296 aa8.03□□□□□ -1.12
ACTB-209ENST00000473257 OR13C8Q8NGS7 320 aa8.03□□□□□ -1.12
ACTB-209ENST00000473257 RNASE11Q8TAA1 199 aaKnown RBP8.03□□□□□ -1.12
ACTB-209ENST00000473257 MARCH1Q8TCQ1 289 aa8.03□□□□□ -1.12
ACTB-209ENST00000473257 PDCD10Q9BUL8 212 aa8.03□□□□□ -1.12
ACTB-209ENST00000473257 SCPEP1Q9HB40 452 aa8.03□□□□□ -1.12
ACTB-209ENST00000473257 ENY2Q9NPA8 101 aa8.03□□□□□ -1.12
ACTB-209ENST00000473257 PRR13Q9NZ81 148 aa8.03□□□□□ -1.12
ACTB-209ENST00000473257 LRP1BQ9NZR2 4599 aa8.02□□□□□ -1.13
ACTB-209ENST00000473257 FAM25AB3EWG3 89 aa8.02□□□□□ -1.13
ACTB-209ENST00000473257 FAM25CB3EWG5 89 aa8.02□□□□□ -1.13
ACTB-209ENST00000473257 FAM25GB3EWG6 89 aa8.02□□□□□ -1.13
ACTB-209ENST00000473257 INS-IGF2F8WCM5 200 aa8.02□□□□□ -1.13
ACTB-209ENST00000473257 H3BMM0 161 aa8.02□□□□□ -1.13
ACTB-209ENST00000473257 AMBPP02760 352 aa8.02□□□□□ -1.13
ACTB-209ENST00000473257 OR10J1P30954 320 aa8.02□□□□□ -1.13
ACTB-209ENST00000473257 SUB1P53999 127 aaKnown RBP eCLIP8.02□□□□□ -1.134e-15■□□□□ 8.7
ACTB-209ENST00000473257 SCGB2B2Q4G0G5 96 aa8.02□□□□□ -1.13
ACTB-209ENST00000473257 RNASE10Q5GAN6 216 aaKnown RBP8.02□□□□□ -1.13
ACTB-209ENST00000473257 LINC00336Q6ZUF6 198 aa8.02□□□□□ -1.13
ACTB-209ENST00000473257 ZNF575Q86XF7 245 aa8.02□□□□□ -1.13
ACTB-209ENST00000473257 ACY3Q96HD9 319 aa8.02□□□□□ -1.13
ACTB-209ENST00000473257 NAA50Q9GZZ1 169 aaKnown RBP8.02□□□□□ -1.13
ACTB-209ENST00000473257 TMEM127O75204 238 aa8.01□□□□□ -1.13
ACTB-209ENST00000473257 IL4P05112 153 aa8.01□□□□□ -1.13
ACTB-209ENST00000473257 HNRNPCP07910 306 aaKnown RBP eCLIP8.01□□□□□ -1.13
ACTB-209ENST00000473257 OR5AC1P0C628 307 aa8.01□□□□□ -1.13
ACTB-209ENST00000473257 HTN3P15516 51 aa8.01□□□□□ -1.13
ACTB-209ENST00000473257 RPL5P46777 297 aaKnown RBP8.01□□□□□ -1.13
ACTB-209ENST00000473257 CENPSQ8N2Z9 138 aa8.01□□□□□ -1.13
ACTB-209ENST00000473257 NPIPB3Q92617 1050 aa8.01□□□□□ -1.13
ACTB-209ENST00000473257 GPR146Q96CH1 333 aa8.01□□□□□ -1.13
ACTB-209ENST00000473257 RRNAD1Q96FB5 475 aaKnown RBP8.01□□□□□ -1.13
ACTB-209ENST00000473257 NARS2Q96I59 477 aaKnown RBP8.01□□□□□ -1.13
ACTB-209ENST00000473257 NDUFAF3Q9BU61 184 aa8.01□□□□□ -1.13
ACTB-209ENST00000473257 FUNDC2Q9BWH2 189 aa8.01□□□□□ -1.13
ACTB-209ENST00000473257 HEYLQ9NQ87 328 aaPredicted RBP8.01□□□□□ -1.13
ACTB-209ENST00000473257 COPZ2Q9P299 210 aa8.01□□□□□ -1.13
ACTB-209ENST00000473257 CACNG5Q9UF02 275 aa8.01□□□□□ -1.13
ACTB-209ENST00000473257 CEBPZOSA8MTT3 80 aa8□□□□□ -1.13
ACTB-209ENST00000473257 CORTO00230 105 aa8□□□□□ -1.13
ACTB-209ENST00000473257 UCP1P25874 307 aa8□□□□□ -1.13
ACTB-209ENST00000473257 SPCS3P61009 180 aa8□□□□□ -1.13
ACTB-209ENST00000473257 TMEM41BQ5BJD5 291 aa8□□□□□ -1.13
ACTB-209ENST00000473257 OR51G1Q8NGK1 321 aa8□□□□□ -1.13
ACTB-209ENST00000473257 Q8WTZ3 238 aa8□□□□□ -1.13
ACTB-209ENST00000473257 LINC00052Q96N35 136 aa8□□□□□ -1.13
ACTB-209ENST00000473257 ABHD1Q96SE0 405 aa8□□□□□ -1.13
ACTB-209ENST00000473257 WDR12Q9GZL7 423 aaKnown RBP8□□□□□ -1.13
ACTB-209ENST00000473257 F6UB75 175 aa7.99□□□□□ -1.13
ACTB-209ENST00000473257 P0DMU3 169 aa7.99□□□□□ -1.13
ACTB-209ENST00000473257 FAM231AP0DMU4 169 aa7.99□□□□□ -1.13
ACTB-209ENST00000473257 FAM231CP0DMU5 169 aa7.99□□□□□ -1.13
ACTB-209ENST00000473257 MED14OSP0DP75 135 aa7.99□□□□□ -1.13
ACTB-209ENST00000473257 SIGLEC15Q6ZMC9 328 aa7.99□□□□□ -1.13
ACTB-209ENST00000473257 SELENOHQ8IZQ5 122 aaKnown RBP7.99□□□□□ -1.13
ACTB-209ENST00000473257 OR1S2Q8NGQ3 325 aa7.99□□□□□ -1.13
ACTB-209ENST00000473257 TERB2Q8NHR7 220 aa7.99□□□□□ -1.13
ACTB-209ENST00000473257 GLYATL2Q8WU03 294 aa7.99□□□□□ -1.13
ACTB-209ENST00000473257 ZNF486Q96H40 463 aaPredicted RBP7.99□□□□□ -1.13
ACTB-209ENST00000473257 RTBDNQ9BSG5 229 aaPredicted RBP7.99□□□□□ -1.13
ACTB-209ENST00000473257 PBDC1Q9BVG4 233 aa7.99□□□□□ -1.13
ACTB-209ENST00000473257 SLC35B3Q9H1N7 401 aa7.99□□□□□ -1.13
ACTB-209ENST00000473257 NRN1Q9NPD7 142 aa7.99□□□□□ -1.13
ACTB-209ENST00000473257 EXTL2Q9UBQ6 330 aa7.99□□□□□ -1.13
ACTB-209ENST00000473257 A0A087WXM4 84 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 RPS10-NUDT3A0A1W2PQS6 291 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 BUB3O43684 328 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 RAB3DO95716 219 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 IFNA10P01566 189 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 PRM2P04554 102 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 RD3LP0DJH9 198 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 PSG1P11464 419 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 HLA-DRB4P13762 266 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 HTR2BP41595 481 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 YPEL3P61236 119 aaPredicted RBP7.98□□□□□ -1.13
ACTB-209ENST00000473257 SNRPD3P62318 126 aaKnown RBP7.98□□□□□ -1.13
ACTB-209ENST00000473257 FAM222AQ5U5X8 452 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 TMEM268Q5VZI3 342 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 ZNF705AQ6ZN79 300 aaPredicted RBP7.98□□□□□ -1.13
ACTB-209ENST00000473257 UBE2DNLQ8IWF7 75 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 ARRDC1Q8N5I2 433 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 CCDC71LQ8N9Z2 235 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 SLC24A4Q8NFF2 622 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 TMEM222Q9H0R3 208 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.98□□□□□ -1.13
ACTB-209ENST00000473257 MTFP1Q9UDX5 166 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 HLA-DRB4X5D2U9 266 aa7.98□□□□□ -1.13
ACTB-209ENST00000473257 APOBP04114 4563 aaKnown RBP7.98□□□□□ -1.13
ACTB-209ENST00000473257 TRAV30A0A087WSZ9 112 aa7.97□□□□□ -1.13
ACTB-209ENST00000473257 TEX13DA0A0J9YY54 714 aaPredicted RBP7.97□□□□□ -1.13
ACTB-209ENST00000473257 ZNF705FA8MVS1 300 aaPredicted RBP7.97□□□□□ -1.13
ACTB-209ENST00000473257 ATG12O94817 140 aa7.97□□□□□ -1.13
ACTB-209ENST00000473257 CDS2O95674 445 aa7.97□□□□□ -1.13
ACTB-209ENST00000473257 ZNF705DP0CH99 300 aaPredicted RBP7.97□□□□□ -1.13
ACTB-209ENST00000473257 ZNF705BP0CI00 300 aaPredicted RBP7.97□□□□□ -1.13
ACTB-209ENST00000473257 NPY1RP25929 384 aa7.97□□□□□ -1.13
ACTB-209ENST00000473257 EIF2B2P49770 351 aaKnown RBP7.97□□□□□ -1.13
ACTB-209ENST00000473257 ZNF90Q03938 601 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms