RNA–Protein interactions for RNA: ENST00000472490.1

BRCA1-211, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-211ENST00000472490 ADAMTSL5Q6ZMM2 481 aa10.76□□□□□ -0.69
BRCA1-211ENST00000472490 ACY3Q96HD9 319 aa10.76□□□□□ -0.69
BRCA1-211ENST00000472490 SLC35E1Q96K37 410 aa10.76□□□□□ -0.69
BRCA1-211ENST00000472490 PUS1Q9Y606 427 aaKnown RBP eCLIP10.76□□□□□ -0.69
BRCA1-211ENST00000472490 TRAV25A0A0B4J276 109 aa10.75□□□□□ -0.69
BRCA1-211ENST00000472490 SSSCA1O60232 199 aa10.75□□□□□ -0.69
BRCA1-211ENST00000472490 FABP1P07148 127 aa10.75□□□□□ -0.69
BRCA1-211ENST00000472490 OR10J1P30954 320 aa10.75□□□□□ -0.69
BRCA1-211ENST00000472490 TAS2R30P59541 319 aa10.75□□□□□ -0.69
BRCA1-211ENST00000472490 YPEL3P61236 119 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-211ENST00000472490 LAMTOR1Q6IAA8 161 aa10.75□□□□□ -0.69
BRCA1-211ENST00000472490 C11orf87Q6NUJ2 197 aa10.75□□□□□ -0.69
BRCA1-211ENST00000472490 TOMM20LQ6UXN7 152 aa10.75□□□□□ -0.69
BRCA1-211ENST00000472490 RBPMS2Q6ZRY4 209 aaKnown RBP10.75□□□□□ -0.69
BRCA1-211ENST00000472490 Q8WTZ3 238 aa10.75□□□□□ -0.69
BRCA1-211ENST00000472490 NPIPB3Q92617 1050 aa10.75□□□□□ -0.69
BRCA1-211ENST00000472490 SMIM8Q96KF7 97 aa10.75□□□□□ -0.69
BRCA1-211ENST00000472490 C2orf50Q96LR7 162 aa10.75□□□□□ -0.69
BRCA1-211ENST00000472490 PSENENQ9NZ42 101 aa10.75□□□□□ -0.69
BRCA1-211ENST00000472490 SMAD5-AS1Q9Y6J3 95 aa10.75□□□□□ -0.69
BRCA1-211ENST00000472490 CCSO14618 274 aa10.74□□□□□ -0.69
BRCA1-211ENST00000472490 TSC22D2O75157 780 aa10.74□□□□□ -0.69
BRCA1-211ENST00000472490 PTTG1O95997 202 aa10.74□□□□□ -0.69
BRCA1-211ENST00000472490 CD5P06127 495 aa10.74□□□□□ -0.69
BRCA1-211ENST00000472490 IGLC1P0CG04 106 aa10.74□□□□□ -0.69
BRCA1-211ENST00000472490 BTNL8Q6UX41 500 aa10.74□□□□□ -0.69
BRCA1-211ENST00000472490 NARS2Q96I59 477 aaKnown RBP10.74□□□□□ -0.69
BRCA1-211ENST00000472490 TMEM231Q9H6L2 316 aa10.74□□□□□ -0.69
BRCA1-211ENST00000472490 MRPL36Q9P0J6 103 aaKnown RBP10.74□□□□□ -0.69
BRCA1-211ENST00000472490 MLXQ9UH92 298 aa10.74□□□□□ -0.69
BRCA1-211ENST00000472490 LSM4Q9Y4Z0 139 aaKnown RBP10.74□□□□□ -0.69
BRCA1-211ENST00000472490 MEGF8Q7Z7M0 2845 aa10.74□□□□□ -0.69
BRCA1-211ENST00000472490 NOTCH3Q9UM47 2321 aa10.73□□□□□ -0.69
BRCA1-211ENST00000472490 IGHV3OR16-8A0A075B7F1 116 aa10.73□□□□□ -0.69
BRCA1-211ENST00000472490 IGHV7-4-1A0A0J9YVY3 117 aa10.73□□□□□ -0.69
BRCA1-211ENST00000472490 A0A1W2PS18 150 aa10.73□□□□□ -0.69
BRCA1-211ENST00000472490 ZFP92A6NM28 416 aa10.73□□□□□ -0.69
BRCA1-211ENST00000472490 H3BP45 60 aa10.73□□□□□ -0.69
BRCA1-211ENST00000472490 L7N2F9 121 aa10.73□□□□□ -0.69
BRCA1-211ENST00000472490 SCAF4O95104 1147 aaKnown RBP10.73□□□□□ -0.69
BRCA1-211ENST00000472490 IGKV1-17P01599 117 aa10.73□□□□□ -0.69
BRCA1-211ENST00000472490 MBPP02686 304 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-211ENST00000472490 PVALBP20472 110 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-211ENST00000472490 NPPCP23582 126 aa10.73□□□□□ -0.69
BRCA1-211ENST00000472490 VAMP2P63027 116 aa10.73□□□□□ -0.69
BRCA1-211ENST00000472490 GAMTQ14353 236 aa10.73□□□□□ -0.69
BRCA1-211ENST00000472490 GUCA2BQ16661 112 aa10.73□□□□□ -0.69
BRCA1-211ENST00000472490 METTL26Q96S19 204 aa10.73□□□□□ -0.69
BRCA1-211ENST00000472490 SMPXQ9UHP9 88 aa10.73□□□□□ -0.69
BRCA1-211ENST00000472490 ZNF207O43670 478 aaKnown RBP10.72□□□□□ -0.69
BRCA1-211ENST00000472490 RD3LP0DJH9 198 aa10.72□□□□□ -0.69
BRCA1-211ENST00000472490 EDN2P20800 178 aa10.72□□□□□ -0.69
BRCA1-211ENST00000472490 CYCSP99999 105 aaKnown RBP10.72□□□□□ -0.69
BRCA1-211ENST00000472490 TIGITQ495A1 244 aa10.72□□□□□ -0.69
BRCA1-211ENST00000472490 TMEM61Q8N0U2 210 aa10.72□□□□□ -0.69
BRCA1-211ENST00000472490 OR10P1Q8NGE3 313 aa10.72□□□□□ -0.69
BRCA1-211ENST00000472490 RHPN1-AS1Q9BWJ2 59 aa10.72□□□□□ -0.69
BRCA1-211ENST00000472490 PFDN2Q9UHV9 154 aa10.72□□□□□ -0.69
BRCA1-211ENST00000472490 IZUMO1RA6ND01 250 aa10.71□□□□□ -0.69
BRCA1-211ENST00000472490 CHEK1O14757 476 aa10.71□□□□□ -0.69
BRCA1-211ENST00000472490 SSNA1O43805 119 aa10.71□□□□□ -0.69
BRCA1-211ENST00000472490 TOMM40O96008 361 aa10.71□□□□□ -0.69
BRCA1-211ENST00000472490 WDR89Q96FK6 387 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-211ENST00000472490 SPAG8Q99932 426 aaPredicted RBP10.71□□□□□ -0.69
BRCA1-211ENST00000472490 ZFAND3Q9H8U3 227 aa10.71□□□□□ -0.69
BRCA1-211ENST00000472490 RCL1Q9Y2P8 373 aaKnown RBP10.71□□□□□ -0.69
BRCA1-211ENST00000472490 LSM5Q9Y4Y9 91 aaKnown RBP10.71□□□□□ -0.69
BRCA1-211ENST00000472490 NOTCH1P46531 2555 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 C7orf66A4D0T2 115 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 ZNF785A8K8V0 405 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 K7EPK0 472 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 GOSR2O14653 212 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 TSPAN4O14817 238 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 CFDP00746 253 aaPredicted RBP10.7□□□□□ -0.7
BRCA1-211ENST00000472490 PAX9P55771 341 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 CD81P60033 236 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 PAFAH1B2P68402 229 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 AKR1C1Q04828 323 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 OR8G2PQ6IF36 304 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 OR51G1Q8NGK1 321 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 GRAMD2BQ96HH9 432 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 ZNF414Q96IQ9 312 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 B9D2Q9BPU9 175 aa10.7□□□□□ -0.7
BRCA1-211ENST00000472490 CMYA5Q8N3K9 4069 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 PRSS46E5RG02 174 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 FNDC10F2Z333 226 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 RLN2P04090 185 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 IL4P05112 153 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 METTL15P1P0C7V9 234 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 PSG1P11464 419 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 CRYBB3P26998 211 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 NUP62P37198 522 aaPredicted RBP10.69□□□□□ -0.7
BRCA1-211ENST00000472490 EIF2B2P49770 351 aaKnown RBP10.69□□□□□ -0.7
BRCA1-211ENST00000472490 BCAP31P51572 246 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 S100A10P60903 97 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 TMEM14EPQ6UXP3 125 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 ACOT7LQ6ZUV0 252 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 Q8N1Y9 231 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 RNF2Q99496 336 aa10.69□□□□□ -0.7
BRCA1-211ENST00000472490 TRGV9Q99603 122 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms