RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 SPACA4Q8TDM5 124 aa3.1□□□□□ -1.91
SMC5-202ENST00000471372 HIST1H2BLQ99880 126 aa3.1□□□□□ -1.91
SMC5-202ENST00000471372 HSPB9Q9BQS6 159 aa3.1□□□□□ -1.91
SMC5-202ENST00000471372 PBOV1Q9GZY1 135 aa3.1□□□□□ -1.91
SMC5-202ENST00000471372 MYH11P35749 1972 aa3.1□□□□□ -1.91
SMC5-202ENST00000471372 IGLV3-9A0A075B6K5 115 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 A0A0D9SG52 128 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 DUXBA0A1W2PPF3 345 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 MAP1LC3B2A6NCE7 125 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 ORC5O43913 435 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 TCL1BO95988 128 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 NAPSAO96009 420 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 P0DMU3 169 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 FAM231AP0DMU4 169 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 FAM231CP0DMU5 169 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 RNASE4P34096 147 aaKnown RBP3.09□□□□□ -1.91
SMC5-202ENST00000471372 SRP14P37108 136 aaKnown RBP3.09□□□□□ -1.91
SMC5-202ENST00000471372 PSMD8P48556 350 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 NNATQ16517 81 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 NDUFA5Q16718 116 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 SCGB2B2Q4G0G5 96 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 TMEM155Q4W5P6 130 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 TMEM78Q5T7P6 136 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 DCUN1D2Q6PH85 259 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 Q6ZQT0 140 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 TMEM70Q9BUB7 260 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 DDA1Q9BW61 102 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 MAP1LC3BQ9GZQ8 125 aa3.09□□□□□ -1.91
SMC5-202ENST00000471372 RTEL1-TNFRSF6BF6WH68 1400 aa3.09□□□□□ -1.92
SMC5-202ENST00000471372 TMEM212A6NML5 194 aa3.08□□□□□ -1.92
SMC5-202ENST00000471372 J3QRE1 110 aa3.08□□□□□ -1.92
SMC5-202ENST00000471372 LTC4SQ16873 150 aa3.08□□□□□ -1.92
SMC5-202ENST00000471372 AAED1Q7RTV5 226 aa3.08□□□□□ -1.92
SMC5-202ENST00000471372 DYDC1Q8WWB3 177 aa3.08□□□□□ -1.92
SMC5-202ENST00000471372 MALSU1Q96EH3 234 aa3.08□□□□□ -1.92
SMC5-202ENST00000471372 TXNDC17Q9BRA2 123 aa3.08□□□□□ -1.92
SMC5-202ENST00000471372 NDUFAF1Q9Y375 327 aa3.08□□□□□ -1.92
SMC5-202ENST00000471372 PXDNLA1KZ92 1463 aa3.08□□□□□ -1.92
SMC5-202ENST00000471372 MED1Q15648 1581 aaPredicted RBP3.08□□□□□ -1.92
SMC5-202ENST00000471372 M0R378 163 aa3.07□□□□□ -1.92
SMC5-202ENST00000471372 PMP2P02689 132 aa3.07□□□□□ -1.92
SMC5-202ENST00000471372 METTL15P1P0C7V9 234 aa3.07□□□□□ -1.92
SMC5-202ENST00000471372 KRTAP10-1P60331 282 aa3.07□□□□□ -1.92
SMC5-202ENST00000471372 ZNF345Q14585 488 aa3.07□□□□□ -1.92
SMC5-202ENST00000471372 DHFR2Q86XF0 187 aa3.07□□□□□ -1.92
SMC5-202ENST00000471372 C9orf163Q8N9P6 203 aa3.07□□□□□ -1.92
SMC5-202ENST00000471372 OR4E2Q8NGC2 313 aa3.07□□□□□ -1.92
SMC5-202ENST00000471372 OR8B3Q8NGG8 313 aa3.07□□□□□ -1.92
SMC5-202ENST00000471372 EPDR1Q9UM22 224 aa3.07□□□□□ -1.92
SMC5-202ENST00000471372 KIAA2026Q5HYC2 2103 aa3.07□□□□□ -1.92
SMC5-202ENST00000471372 MYO9BQ13459 2157 aa3.07□□□□□ -1.92
SMC5-202ENST00000471372 CUL9Q8IWT3 2517 aa3.07□□□□□ -1.92
SMC5-202ENST00000471372 IGKV1D-42A0A075B6H8 117 aa3.06□□□□□ -1.92
SMC5-202ENST00000471372 IBA57-AS1B1ANH7 110 aa3.06□□□□□ -1.92
SMC5-202ENST00000471372 APOA2P02652 100 aa3.06□□□□□ -1.92
SMC5-202ENST00000471372 NFYBP25208 207 aa3.06□□□□□ -1.92
SMC5-202ENST00000471372 AQP3Q92482 292 aa3.06□□□□□ -1.92
SMC5-202ENST00000471372 PLEKHB2Q96CS7 222 aa3.06□□□□□ -1.92
SMC5-202ENST00000471372 OR2J1Q9GZK6 312 aa3.06□□□□□ -1.92
SMC5-202ENST00000471372 YTHDC2Q9H6S0 1430 aaKnown RBP3.06□□□□□ -1.92
SMC5-202ENST00000471372 PTPRBP23467 1997 aa3.05□□□□□ -1.92
SMC5-202ENST00000471372 MYH3P11055 1940 aa3.05□□□□□ -1.92
SMC5-202ENST00000471372 TONSLQ96HA7 1378 aa3.05□□□□□ -1.92
SMC5-202ENST00000471372 H3BQV1 296 aa3.05□□□□□ -1.92
SMC5-202ENST00000471372 TMEM256-PLSCR3K7ERE1 68 aa3.05□□□□□ -1.92
SMC5-202ENST00000471372 ZNF737O75373 536 aa3.05□□□□□ -1.92
SMC5-202ENST00000471372 C1QCP02747 245 aa3.05□□□□□ -1.92
SMC5-202ENST00000471372 CTSDP07339 412 aaPredicted RBP3.05□□□□□ -1.92
SMC5-202ENST00000471372 COX6A1P12074 109 aa3.05□□□□□ -1.92
SMC5-202ENST00000471372 FKBP2P26885 142 aaKnown RBP3.05□□□□□ -1.92
SMC5-202ENST00000471372 INSL3P51460 131 aa3.05□□□□□ -1.92
SMC5-202ENST00000471372 BCL2L15Q5TBC7 163 aa3.05□□□□□ -1.92
SMC5-202ENST00000471372 C10orf126Q8N4M7 172 aa3.05□□□□□ -1.92
SMC5-202ENST00000471372 RIC1Q4ADV7 1423 aa3.04□□□□□ -1.92
SMC5-202ENST00000471372 UHRF1BP1Q6BDS2 1440 aa3.04□□□□□ -1.92
SMC5-202ENST00000471372 A0A1W2PRE2 83 aa3.04□□□□□ -1.92
SMC5-202ENST00000471372 SDCBPO00560 298 aaPredicted RBP3.04□□□□□ -1.92
SMC5-202ENST00000471372 DEFB128Q7Z7B8 93 aa3.04□□□□□ -1.92
SMC5-202ENST00000471372 OR13D1Q8NGV5 346 aa3.04□□□□□ -1.92
SMC5-202ENST00000471372 GRPEL2Q8TAA5 225 aa3.04□□□□□ -1.92
SMC5-202ENST00000471372 TEX47Q8TBZ9 253 aa3.04□□□□□ -1.92
SMC5-202ENST00000471372 GPX7Q96SL4 187 aaPredicted RBP3.04□□□□□ -1.92
SMC5-202ENST00000471372 MED11Q9P086 117 aa3.04□□□□□ -1.92
SMC5-202ENST00000471372 NCKAP5O14513 1909 aa3.03□□□□□ -1.92
SMC5-202ENST00000471372 MYH2Q9UKX2 1941 aa3.03□□□□□ -1.92
SMC5-202ENST00000471372 OR2T1O43869 369 aa3.03□□□□□ -1.92
SMC5-202ENST00000471372 OGNP20774 298 aaKnown RBP3.03□□□□□ -1.92
SMC5-202ENST00000471372 PP632Q6XCG6 107 aa3.03□□□□□ -1.92
SMC5-202ENST00000471372 C7orf65Q6ZTY9 151 aa3.03□□□□□ -1.92
SMC5-202ENST00000471372 MRPL32Q9BYC8 188 aaKnown RBP3.03□□□□□ -1.92
SMC5-202ENST00000471372 LHFPL6Q9Y693 200 aa3.03□□□□□ -1.92
SMC5-202ENST00000471372 MPDZO75970 2070 aa3.03□□□□□ -1.92
SMC5-202ENST00000471372 UBE2BP63146 152 aa3.02□□□□□ -1.93
SMC5-202ENST00000471372 SOSTDC1Q6X4U4 206 aa3.02□□□□□ -1.93
SMC5-202ENST00000471372 C3orf56Q8N813 242 aa3.02□□□□□ -1.93
SMC5-202ENST00000471372 NUP35Q8NFH5 326 aa3.02□□□□□ -1.93
SMC5-202ENST00000471372 RNASE11Q8TAA1 199 aaKnown RBP3.02□□□□□ -1.93
SMC5-202ENST00000471372 CANT1Q8WVQ1 401 aa3.02□□□□□ -1.93
SMC5-202ENST00000471372 RMND5BQ96G75 393 aaPredicted RBP3.02□□□□□ -1.93
SMC5-202ENST00000471372 CARD19Q96LW7 228 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms