RNA–Protein interactions for RNA: ENST00000470240.5

SMC4-212, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 724 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-212ENST00000470240 GBGT1Q8N5D6 347 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 OR1B1Q8NGR6 318 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 OR2T6Q8NHC8 308 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 C8orf46Q8TAG6 207 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 NEU4Q8WWR8 484 aaPredicted RBP6.43□□□□□ -1.38
SMC4-212ENST00000470240 RBM14Q96PK6 669 aaKnown RBP6.43□□□□□ -1.38
SMC4-212ENST00000470240 SLC25A2Q9BXI2 301 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 GNB1LQ9BYB4 327 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 ONECUT1Q9UBC0 465 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 SIGLEC9Q9Y336 463 aa6.43□□□□□ -1.38
SMC4-212ENST00000470240 USP34Q70CQ2 3546 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 IGKV1OR2-108A0A075B7D4 117 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 GGTLC3B5MD39 225 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 K7EN84 100 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 CNIH1O95406 144 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 AMY1AP04745 511 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 MED14OSP0DP75 135 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 HIST1H1EP10412 219 aaKnown RBP6.42□□□□□ -1.38
SMC4-212ENST00000470240 GATA2P23769 480 aaPredicted RBP6.42□□□□□ -1.38
SMC4-212ENST00000470240 COX7A1P24310 79 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 IER3P46695 156 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 RAB4BP61018 213 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 C10orf55Q5SWW7 151 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 CCDC144NLQ6NUI1 221 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 LINC00305Q7Z4B0 112 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 PPP1R27Q86WC6 154 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 OR8I2Q8N0Y5 310 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 SAMD10Q9BYL1 202 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 KRTAP9-9Q9BYP9 154 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 KRTAP9-4Q9BYQ2 154 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 ZNF331Q9NQX6 463 aaPredicted RBP6.42□□□□□ -1.38
SMC4-212ENST00000470240 NAT8BQ9UHF3 227 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 F11RQ9Y624 299 aaKnown RBP6.42□□□□□ -1.38
SMC4-212ENST00000470240 V9GYV3 84 aa6.42□□□□□ -1.38
SMC4-212ENST00000470240 CNOT1A5YKK6 2376 aaKnown RBP6.42□□□□□ -1.38
SMC4-212ENST00000470240 VCANP13611 3396 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 IGHV3-72A0A0B4J1Y9 119 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 IGLC7A0M8Q6 106 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 IZUMO1RA6ND01 250 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 K7EQM0 130 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 M0R1W7 72 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 SLC17A3O00476 420 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 SCGB1D1O95968 90 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 IGLV1-47P01700 117 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 SLC25A5P05141 298 aaKnown RBP6.41□□□□□ -1.38
SMC4-212ENST00000470240 REG1AP05451 166 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 SFTPCP11686 197 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 ORM2P19652 201 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 CBLN1P23435 193 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 HTR1DP28221 377 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 DDTP30046 118 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 CX3CL1P78423 397 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 FAM209BQ5JX69 171 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 FAM162BQ5T6X4 162 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 HCP5Q6MZN7 132 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 FAM231DQ6ZW35 169 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 ZNF329Q86UD4 541 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 C5orf17Q8NAS9 161 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 TMEM116Q8NCL8 245 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 LINC01560Q8TB33 94 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 ZNF503Q96F45 646 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 FAM167A-AS1Q96KT0 104 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 MS4A10Q96PG2 267 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 RASL11BQ9BPW5 248 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 FNDC4Q9H6D8 234 aaPredicted RBP6.41□□□□□ -1.38
SMC4-212ENST00000470240 CBLN4Q9NTU7 201 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 HIGD1AQ9Y241 93 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 EP300Q09472 2414 aaPredicted RBP6.41□□□□□ -1.38
SMC4-212ENST00000470240 PLCE1Q9P212 2302 aa6.41□□□□□ -1.38
SMC4-212ENST00000470240 BDP1A6H8Y1 2624 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 TRAV30A0A087WSZ9 112 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 PSMB11A5LHX3 300 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 OOSP1A8MZH6 123 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 CRYGCP07315 174 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 CRYGBP07316 175 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 RD3LP0DJH9 198 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 GZMBP10144 247 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 BRS3P32247 399 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 PLA2G5P39877 138 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 GPR6P46095 362 aaPredicted RBP6.4□□□□□ -1.38
SMC4-212ENST00000470240 PLP1P60201 277 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 Q0VG73 95 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 OR5I1Q13606 314 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 DIAPH2-AS1Q14236 149 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 MMDQ15546 238 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 TMEM183BQ1AE95 376 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 KRTAP19-4Q3LI73 84 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 LBHQ53QV2 105 aaPredicted RBP6.4□□□□□ -1.38
SMC4-212ENST00000470240 OR10J3Q5JRS4 329 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 C9orf152Q5JTZ5 239 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 TPTE2P1Q5T6R2 138 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 PVRIGQ6DKI7 326 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 SRSF12Q8WXF0 261 aaKnown RBP6.4□□□□□ -1.38
SMC4-212ENST00000470240 DAZAP1Q96EP5 407 aaKnown RBP6.4□□□□□ -1.38
SMC4-212ENST00000470240 GRAMD2BQ96HH9 432 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 FMC1Q96HJ9 113 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 IGF2BP2-AS1Q96M15 143 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 ATG101Q9BSB4 218 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 PRDM13Q9H4Q3 707 aa6.4□□□□□ -1.38
SMC4-212ENST00000470240 ZNF586Q9NXT0 402 aa6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms