RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 RBKSQ9H477 322 aa13.55□□□□□ -0.24
PHGDH-204ENST00000469443 TENM2Q9NT68 2774 aa13.54□□□□□ -0.24
PHGDH-204ENST00000469443 IGHV3-66A0A0C4DH42 116 aa13.54□□□□□ -0.24
PHGDH-204ENST00000469443 A0A1W2PS18 150 aa13.54□□□□□ -0.24
PHGDH-204ENST00000469443 IFNA10P01566 189 aa13.54□□□□□ -0.24
PHGDH-204ENST00000469443 IGLC1P0CG04 106 aa13.54□□□□□ -0.24
PHGDH-204ENST00000469443 VAMP1P23763 118 aa13.54□□□□□ -0.24
PHGDH-204ENST00000469443 LILRB2Q8N423 598 aa13.54□□□□□ -0.24
PHGDH-204ENST00000469443 GBGT1Q8N5D6 347 aa13.54□□□□□ -0.24
PHGDH-204ENST00000469443 LRTM2Q8N967 370 aa13.54□□□□□ -0.24
PHGDH-204ENST00000469443 METTL26Q96S19 204 aa13.54□□□□□ -0.24
PHGDH-204ENST00000469443 U3KQ87 197 aa13.54□□□□□ -0.24
PHGDH-204ENST00000469443 KIR2DL5BA0A0G2JN68 375 aa13.53□□□□□ -0.24
PHGDH-204ENST00000469443 KIR2DL5BA0A0G2JPC4 375 aa13.53□□□□□ -0.24
PHGDH-204ENST00000469443 UBE2CO00762 179 aa13.53□□□□□ -0.24
PHGDH-204ENST00000469443 DFFBO76075 338 aa13.53□□□□□ -0.24
PHGDH-204ENST00000469443 CRYBB3P26998 211 aa13.53□□□□□ -0.24
PHGDH-204ENST00000469443 OR10J1P30954 320 aa13.53□□□□□ -0.24
PHGDH-204ENST00000469443 INPP1P49441 399 aa13.53□□□□□ -0.24
PHGDH-204ENST00000469443 Q6ZWC4 215 aa13.53□□□□□ -0.24
PHGDH-204ENST00000469443 APRG1Q8IVJ8 170 aa13.53□□□□□ -0.24
PHGDH-204ENST00000469443 KIR2DL5AQ8N109 375 aa13.53□□□□□ -0.24
PHGDH-204ENST00000469443 CENPSQ8N2Z9 138 aa13.53□□□□□ -0.24
PHGDH-204ENST00000469443 KIR2DL5BQ8NHK3 375 aa13.53□□□□□ -0.24
PHGDH-204ENST00000469443 MAP6D1Q9H9H5 199 aa13.53□□□□□ -0.24
PHGDH-204ENST00000469443 PITX3O75364 302 aa13.52□□□□□ -0.25
PHGDH-204ENST00000469443 SFT2D2O95562 160 aa13.52□□□□□ -0.25
PHGDH-204ENST00000469443 ATP5IP56385 69 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-204ENST00000469443 YPEL3P61236 119 aaPredicted RBP13.52□□□□□ -0.25
PHGDH-204ENST00000469443 PPP1R1AQ13522 171 aa13.52□□□□□ -0.25
PHGDH-204ENST00000469443 RBMS2Q15434 407 aaKnown RBP13.52□□□□□ -0.25
PHGDH-204ENST00000469443 BAK1Q16611 211 aa13.52□□□□□ -0.25
PHGDH-204ENST00000469443 TRIQKQ629K1 86 aa13.52□□□□□ -0.25
PHGDH-204ENST00000469443 IL17DQ8TAD2 202 aa13.52□□□□□ -0.25
PHGDH-204ENST00000469443 NARS2Q96I59 477 aaKnown RBP13.52□□□□□ -0.25
PHGDH-204ENST00000469443 TP53TG1Q9Y2A0 90 aa13.52□□□□□ -0.25
PHGDH-204ENST00000469443 TRAV2A0A0B4J234 112 aa13.51□□□□□ -0.25
PHGDH-204ENST00000469443 NAP1L6A6NFF2 107 aa13.51□□□□□ -0.25
PHGDH-204ENST00000469443 DNASE2O00115 360 aaPredicted RBP13.51□□□□□ -0.25
PHGDH-204ENST00000469443 SLC25A6P12236 298 aa13.51□□□□□ -0.25
PHGDH-204ENST00000469443 RPL35AP18077 110 aaKnown RBP13.51□□□□□ -0.25
PHGDH-204ENST00000469443 ZNF124Q15973 351 aa13.51□□□□□ -0.25
PHGDH-204ENST00000469443 WFDC3Q8IUB2 231 aa13.51□□□□□ -0.25
PHGDH-204ENST00000469443 STPG3Q8N7X2 389 aa13.51□□□□□ -0.25
PHGDH-204ENST00000469443 Q8WTZ3 238 aa13.51□□□□□ -0.25
PHGDH-204ENST00000469443 NPIPB3Q92617 1050 aa13.51□□□□□ -0.25
PHGDH-204ENST00000469443 ACY3Q96HD9 319 aa13.51□□□□□ -0.25
PHGDH-204ENST00000469443 MS4A6AQ9H2W1 248 aa13.51□□□□□ -0.25
PHGDH-204ENST00000469443 AGRNO00468 2067 aa13.51□□□□□ -0.25
PHGDH-204ENST00000469443 P2RY1P47900 373 aa13.5□□□□□ -0.25
PHGDH-204ENST00000469443 UBE2MP61081 183 aaKnown RBP13.5□□□□□ -0.25
PHGDH-204ENST00000469443 RPL11P62913 178 aaKnown RBP13.5□□□□□ -0.25
PHGDH-204ENST00000469443 DEFB135Q30KP9 77 aa13.5□□□□□ -0.25
PHGDH-204ENST00000469443 TMED3Q9Y3Q3 217 aa13.5□□□□□ -0.25
PHGDH-204ENST00000469443 SACSQ9NZJ4 4579 aa13.5□□□□□ -0.25
PHGDH-204ENST00000469443 FAM90A26D6RGX4 464 aa13.49□□□□□ -0.25
PHGDH-204ENST00000469443 SPRY2O43597 315 aa13.49□□□□□ -0.25
PHGDH-204ENST00000469443 IFNA4P05014 189 aa13.49□□□□□ -0.25
PHGDH-204ENST00000469443 GRAMD2BQ96HH9 432 aa13.49□□□□□ -0.25
PHGDH-204ENST00000469443 SDHCQ99643 169 aaPredicted RBP13.49□□□□□ -0.25
PHGDH-204ENST00000469443 NDUFA13Q9P0J0 144 aa13.49□□□□□ -0.25
PHGDH-204ENST00000469443 U3KQE9 123 aa13.49□□□□□ -0.25
PHGDH-204ENST00000469443 MED6O75586 246 aa13.48□□□□□ -0.25
PHGDH-204ENST00000469443 NDUFB6O95139 128 aa13.48□□□□□ -0.25
PHGDH-204ENST00000469443 TOMM40O96008 361 aa13.48□□□□□ -0.25
PHGDH-204ENST00000469443 HNRNPCP07910 306 aaKnown RBP eCLIP13.48□□□□□ -0.25
PHGDH-204ENST00000469443 RNF183Q96D59 192 aa13.48□□□□□ -0.25
PHGDH-204ENST00000469443 RABAC1Q9UI14 185 aa13.48□□□□□ -0.25
PHGDH-204ENST00000469443 LYSTQ99698 3801 aa13.47□□□□□ -0.25
PHGDH-204ENST00000469443 IL4P05112 153 aa13.47□□□□□ -0.25
PHGDH-204ENST00000469443 HOXB5P09067 269 aa13.47□□□□□ -0.25
PHGDH-204ENST00000469443 RD3LP0DJH9 198 aa13.47□□□□□ -0.25
PHGDH-204ENST00000469443 IAPPP10997 89 aa13.47□□□□□ -0.25
PHGDH-204ENST00000469443 GPX4P36969 197 aaPredicted RBP13.47□□□□□ -0.25
PHGDH-204ENST00000469443 DEFB131AP59861 70 aa13.47□□□□□ -0.25
PHGDH-204ENST00000469443 USF2Q15853 346 aaPredicted RBP13.47□□□□□ -0.25
PHGDH-204ENST00000469443 FAM24BQ8N5W8 94 aa13.47□□□□□ -0.25
PHGDH-204ENST00000469443 STXBP6Q8NFX7 210 aa13.47□□□□□ -0.25
PHGDH-204ENST00000469443 LINC00854A0A1B0GVQ3 168 aa13.46□□□□□ -0.25
PHGDH-204ENST00000469443 C9orf170A2RU37 121 aa13.46□□□□□ -0.25
PHGDH-204ENST00000469443 CENPXA8MT69 81 aa13.46□□□□□ -0.25
PHGDH-204ENST00000469443 K7EQG2 157 aa13.46□□□□□ -0.25
PHGDH-204ENST00000469443 RAB11AP62491 216 aa13.46□□□□□ -0.25
PHGDH-204ENST00000469443 GGNBP1Q5YKI7 109 aa13.46□□□□□ -0.25
PHGDH-204ENST00000469443 C16orf54Q6UWD8 224 aa13.46□□□□□ -0.25
PHGDH-204ENST00000469443 SLC35E1Q96K37 410 aa13.46□□□□□ -0.25
PHGDH-204ENST00000469443 CIB3Q96Q77 187 aaPredicted RBP13.46□□□□□ -0.25
PHGDH-204ENST00000469443 C7orf50Q9BRJ6 194 aaKnown RBP13.46□□□□□ -0.25
PHGDH-204ENST00000469443 CSTL1Q9H114 145 aa13.46□□□□□ -0.25
PHGDH-204ENST00000469443 LCE6AA0A183 80 aa13.45□□□□□ -0.26
PHGDH-204ENST00000469443 MPTX1A8MV57 137 aa13.45□□□□□ -0.26
PHGDH-204ENST00000469443 SYNGR2O43760 224 aa13.45□□□□□ -0.26
PHGDH-204ENST00000469443 PSG1P11464 419 aa13.45□□□□□ -0.26
PHGDH-204ENST00000469443 IL7P13232 177 aa13.45□□□□□ -0.26
PHGDH-204ENST00000469443 EIF2B2P49770 351 aaKnown RBP13.45□□□□□ -0.26
PHGDH-204ENST00000469443 GAMTQ14353 236 aa13.45□□□□□ -0.26
PHGDH-204ENST00000469443 LEMD1Q68G75 181 aa13.45□□□□□ -0.26
PHGDH-204ENST00000469443 GLMPQ8WWB7 406 aa13.45□□□□□ -0.26
PHGDH-204ENST00000469443 FLVCR2Q9UPI3 526 aa13.45□□□□□ -0.26
PHGDH-204ENST00000469443 HELTA6NFD8 242 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms