RNA–Protein interactions for RNA: ENST00000468872.5

LSM5-209, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 636 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-209ENST00000468872 SLC35B4Q969S0 331 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 IMP4Q96G21 291 aaKnown RBP2.22□□□□□ -2.05
LSM5-209ENST00000468872 ABHD14BQ96IU4 210 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 LYSTQ99698 3801 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 UPK3BQ9BT76 320 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 PECRQ9BY49 303 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 MED28Q9H204 178 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 DNAJC12Q9UKB3 198 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 PRELID1Q9Y255 219 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 HDGFL3Q9Y3E1 203 aa2.22□□□□□ -2.05
LSM5-209ENST00000468872 SIPA1L3O60292 1781 aaPredicted RBP2.22□□□□□ -2.05
LSM5-209ENST00000468872 DMBT1Q9UGM3 2413 aaPredicted RBP2.21□□□□□ -2.06
LSM5-209ENST00000468872 HELZP42694 1942 aaKnown RBP2.21□□□□□ -2.06
LSM5-209ENST00000468872 ZNF407Q9C0G0 2248 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 HAND1O96004 215 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 TNNC2P02585 160 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 CRYBA1P05813 215 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 CBR1P16152 277 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 CD36P16671 472 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 CCL1P22362 96 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 HSPA9P38646 679 aaKnown RBP2.21□□□□□ -2.06
LSM5-209ENST00000468872 TAF1AQ15573 450 aaPredicted RBP2.21□□□□□ -2.06
LSM5-209ENST00000468872 C1orf194Q5T5A4 169 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 TMEM42Q69YG0 159 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 STX12Q86Y82 276 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 OR1L8Q8NGR8 309 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 OR7D2Q96RA2 312 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 AICDAQ9GZX7 198 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 C16orf95Q9H693 158 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 VPS29Q9UBQ0 182 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 HEY1Q9Y5J3 304 aa2.21□□□□□ -2.06
LSM5-209ENST00000468872 CSMD3Q7Z407 3707 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 A0A087WUJ7 227 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 LINC00862A6NCI5 91 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 ZNF878C9JN71 531 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 COPEO14579 308 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 DEDDO75618 318 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 STK16O75716 305 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 IGLV3-27P01718 113 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 CST2P09228 141 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 ESDP10768 282 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 CTBP2P56545 445 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 SPCS3P61009 180 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 FGF12P61328 243 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 HLA-DRB3P79483 266 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 RUNX1Q01196 453 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 FABP5Q01469 135 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 DR1Q01658 176 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 JOSD1Q15040 202 aaPredicted RBP2.2□□□□□ -2.06
LSM5-209ENST00000468872 EBPQ15125 230 aaKnown RBP2.2□□□□□ -2.06
LSM5-209ENST00000468872 TMED2Q15363 201 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 GUK1Q16774 197 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 ATP5L2Q7Z4Y8 100 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 DEFB119Q8N690 84 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 NATD1Q8N6N6 113 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 OR51D1Q8NGF3 324 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 OR10X1Q8NGY0 326 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 CAPZA3Q96KX2 299 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 PRRT1Q99946 306 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 FBXO5Q9UKT4 447 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 HMCN2Q8NDA2 5059 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 PLXNB1O43157 2135 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 PI4KAP42356 2102 aa2.2□□□□□ -2.06
LSM5-209ENST00000468872 PTPRJQ12913 1337 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 LCTP09848 1927 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 CNIH1O95406 144 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 SOD1P00441 154 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 OR5G3P0C626 314 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 GZMHP20718 246 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 DDTP30046 118 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 OPRM1P35372 400 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 MAP2K4P45985 399 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 DAPP51397 102 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 KRTAP12-3P60328 96 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 SNAP25P60880 206 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 POLR2GP62487 172 aaKnown RBP eCLIP2.19□□□□□ -2.06
LSM5-209ENST00000468872 HERVK_113P63121 156 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 ZNF181Q2M3W8 571 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 HACD4Q5VWC8 232 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 ZNF322Q6U7Q0 402 aaPredicted RBP2.19□□□□□ -2.06
LSM5-209ENST00000468872 CCDC121Q6ZUS5 278 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 LYG2Q86SG7 212 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 DEFB125Q8N687 156 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 ZNF676Q8N7Q3 588 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 PXT1Q8NFP0 134 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 OR2T4Q8NH00 348 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 Q8WTZ3 238 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 FGF13Q92913 245 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 EIF5A2Q9GZV4 153 aaKnown RBP2.19□□□□□ -2.06
LSM5-209ENST00000468872 SMDT1Q9H4I9 107 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 TUBA4BQ9H853 241 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 HES4Q9HCC6 221 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 GLTPQ9NZD2 209 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 POLEQ07864 2286 aa2.19□□□□□ -2.06
LSM5-209ENST00000468872 BAZ2BQ9UIF8 2168 aaKnown RBP2.18□□□□□ -2.06
LSM5-209ENST00000468872 C5orf49A4QMS7 147 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 C19orf71A6NCJ1 209 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 OR6C6A6NF89 314 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 E5RI56 91 aa2.18□□□□□ -2.06
LSM5-209ENST00000468872 MRASO14807 208 aa2.18□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms