RNA–Protein interactions for RNA: ENST00000468844.1

RPL39-202, Transcript of ribosomal protein L39, humanhuman

TSL 1 (best)

Gene RPL39, Length 1,915 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-202ENST00000468844 TEPPQ6URK8 271 aa13.6□□□□□ -0.23
RPL39-202ENST00000468844 TMEM144Q7Z5S9 345 aa13.6□□□□□ -0.23
RPL39-202ENST00000468844 WIPF2Q8TF74 440 aaPredicted RBP13.6□□□□□ -0.23
RPL39-202ENST00000468844 COL6A5A8TX70 2615 aa13.6□□□□□ -0.23
RPL39-202ENST00000468844 TMEM89A2RUT3 159 aa13.6□□□□□ -0.23
RPL39-202ENST00000468844 FAM223BA6NKX1 122 aa13.6□□□□□ -0.23
RPL39-202ENST00000468844 IFNA5P01569 189 aa13.6□□□□□ -0.23
RPL39-202ENST00000468844 ACSM6Q6P461 480 aa13.6□□□□□ -0.23
RPL39-202ENST00000468844 FAM223AQ8IWN6 122 aa13.6□□□□□ -0.23
RPL39-202ENST00000468844 OR4X1Q8NH49 305 aa13.6□□□□□ -0.23
RPL39-202ENST00000468844 VN1R17PQ8TDU5 208 aa13.6□□□□□ -0.23
RPL39-202ENST00000468844 PARD6GQ9BYG4 376 aaPredicted RBP13.6□□□□□ -0.23
RPL39-202ENST00000468844 ARV1Q9H2C2 271 aa13.6□□□□□ -0.23
RPL39-202ENST00000468844 C21orf62Q9NYP8 219 aa13.6□□□□□ -0.23
RPL39-202ENST00000468844 STAB1Q9NY15 2570 aa13.59□□□□□ -0.23
RPL39-202ENST00000468844 FGF7P21781 194 aa13.59□□□□□ -0.23
RPL39-202ENST00000468844 FOXE3Q13461 319 aa13.59□□□□□ -0.23
RPL39-202ENST00000468844 BTNL8Q6UX41 500 aa13.59□□□□□ -0.23
RPL39-202ENST00000468844 RNF141Q8WVD5 230 aa13.59□□□□□ -0.23
RPL39-202ENST00000468844 RSG1Q9BU20 258 aa13.59□□□□□ -0.23
RPL39-202ENST00000468844 NPCDR1Q9BY65 106 aa13.59□□□□□ -0.23
RPL39-202ENST00000468844 RFNGQ9Y644 331 aa13.59□□□□□ -0.23
RPL39-202ENST00000468844 IGKV1D-37A0A075B6S9 117 aa13.58□□□□□ -0.23
RPL39-202ENST00000468844 RPLP1P05386 114 aaKnown RBP13.58□□□□□ -0.23
RPL39-202ENST00000468844 ELANEP08246 267 aa13.58□□□□□ -0.23
RPL39-202ENST00000468844 ATP6V0CP27449 155 aa13.58□□□□□ -0.23
RPL39-202ENST00000468844 ATRAIDQ6UW56 229 aa13.58□□□□□ -0.23
RPL39-202ENST00000468844 RNF152Q8N8N0 203 aa13.58□□□□□ -0.23
RPL39-202ENST00000468844 OR4F5Q8NH21 305 aa13.58□□□□□ -0.23
RPL39-202ENST00000468844 ZNF502Q8TBZ5 544 aa13.58□□□□□ -0.23
RPL39-202ENST00000468844 CCDC140Q96MF4 163 aa13.58□□□□□ -0.23
RPL39-202ENST00000468844 MGST2Q99735 147 aa13.58□□□□□ -0.23
RPL39-202ENST00000468844 GINS3Q9BRX5 216 aa13.58□□□□□ -0.23
RPL39-202ENST00000468844 SH3BGRL3Q9H299 93 aa13.58□□□□□ -0.23
RPL39-202ENST00000468844 CLN5O75503 358 aa13.58□□□□□ -0.24
RPL39-202ENST00000468844 ATF4P18848 351 aaPredicted RBP13.58□□□□□ -0.24
RPL39-202ENST00000468844 ATP5G2Q06055 141 aa13.58□□□□□ -0.24
RPL39-202ENST00000468844 KIAA0141Q14154 515 aaPredicted RBP13.58□□□□□ -0.24
RPL39-202ENST00000468844 THAP8Q8NA92 274 aa13.58□□□□□ -0.24
RPL39-202ENST00000468844 OR5AU1Q8NGC0 362 aa13.58□□□□□ -0.24
RPL39-202ENST00000468844 MYOZ3Q8TDC0 251 aa13.58□□□□□ -0.24
RPL39-202ENST00000468844 TRRAPQ9Y4A5 3859 aa13.57□□□□□ -0.24
RPL39-202ENST00000468844 MPDU1O75352 247 aa13.57□□□□□ -0.24
RPL39-202ENST00000468844 IGLC1P0CG04 106 aa13.57□□□□□ -0.24
RPL39-202ENST00000468844 FCGR2BP31994 310 aaPredicted RBP13.57□□□□□ -0.24
RPL39-202ENST00000468844 MFAP4P55083 255 aa13.57□□□□□ -0.24
RPL39-202ENST00000468844 SCGB1C1Q8TD33 95 aa13.57□□□□□ -0.24
RPL39-202ENST00000468844 USMG5Q96IX5 58 aa13.57□□□□□ -0.24
RPL39-202ENST00000468844 RNF114Q9Y508 228 aa13.57□□□□□ -0.24
RPL39-202ENST00000468844 AGPAT2O15120 278 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 IGHV3-11P01762 117 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 NPBWR1P48145 328 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 TCTEX1D4Q5JR98 221 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 TMED6Q8WW62 240 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 EEF1AKMT3Q96AZ1 226 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 GGTLC1Q9BX51 225 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 A0A0G2JLM5 398 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 CLPSL1A2RUU4 121 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 OR2T8A6NH00 312 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 ZFP92A6NM28 416 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 NUDT19A8MXV4 375 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 GNG7O60262 68 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 CAMLGP49069 296 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 PROK1P58294 105 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 EIF5AP63241 154 aaKnown RBP13.56□□□□□ -0.24
RPL39-202ENST00000468844 ZNF90Q03938 601 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 Q56UQ5 140 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 COMMD1Q8N668 190 aa13.56□□□□□ -0.24
RPL39-202ENST00000468844 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.56□□□□□ -0.24
RPL39-202ENST00000468844 VWFP04275 2813 aa13.55□□□□□ -0.24
RPL39-202ENST00000468844 TRBV7-1A0A0A6YYK4 115 aa13.55□□□□□ -0.24
RPL39-202ENST00000468844 TMEM218A2RU14 115 aa13.55□□□□□ -0.24
RPL39-202ENST00000468844 DNASE2O00115 360 aaPredicted RBP13.55□□□□□ -0.24
RPL39-202ENST00000468844 HAX1O00165 279 aa13.55□□□□□ -0.24
RPL39-202ENST00000468844 IGKV1-17P01599 117 aa13.55□□□□□ -0.24
RPL39-202ENST00000468844 SPP1P10451 314 aa13.55□□□□□ -0.24
RPL39-202ENST00000468844 OR10J1P30954 320 aa13.55□□□□□ -0.24
RPL39-202ENST00000468844 GPR183P32249 361 aa13.55□□□□□ -0.24
RPL39-202ENST00000468844 TMEM182Q6ZP80 229 aaPredicted RBP13.55□□□□□ -0.24
RPL39-202ENST00000468844 ZNF491Q8N8L2 437 aa13.55□□□□□ -0.24
RPL39-202ENST00000468844 NARS2Q96I59 477 aaKnown RBP13.55□□□□□ -0.24
RPL39-202ENST00000468844 TXN2Q99757 166 aa13.55□□□□□ -0.24
RPL39-202ENST00000468844 TCRBV4S1A1TA0A5B7 111 aa13.54□□□□□ -0.24
RPL39-202ENST00000468844 CLEC3BP05452 202 aa13.54□□□□□ -0.24
RPL39-202ENST00000468844 GATA2P23769 480 aaPredicted RBP13.54□□□□□ -0.24
RPL39-202ENST00000468844 CLEC19AQ6UXS0 136 aa13.54□□□□□ -0.24
RPL39-202ENST00000468844 OR4X2Q8NGF9 303 aa13.54□□□□□ -0.24
RPL39-202ENST00000468844 NUPL2O15504 423 aaKnown RBP13.54□□□□□ -0.24
RPL39-202ENST00000468844 CTSGP08311 255 aa13.54□□□□□ -0.24
RPL39-202ENST00000468844 ADMP35318 185 aa13.54□□□□□ -0.24
RPL39-202ENST00000468844 HIST2H2BDQ6DRA6 164 aa13.54□□□□□ -0.24
RPL39-202ENST00000468844 PRIMA1Q86XR5 153 aa13.54□□□□□ -0.24
RPL39-202ENST00000468844 GNPNAT1Q96EK6 184 aaPredicted RBP13.54□□□□□ -0.24
RPL39-202ENST00000468844 TRGV9Q99603 122 aa13.54□□□□□ -0.24
RPL39-202ENST00000468844 PSMG3Q9BT73 122 aaPredicted RBP13.54□□□□□ -0.24
RPL39-202ENST00000468844 CHRDL1Q9BU40 450 aa13.54□□□□□ -0.24
RPL39-202ENST00000468844 NKX6-2Q9C056 277 aaPredicted RBP13.54□□□□□ -0.24
RPL39-202ENST00000468844 TRBV12-3P01733 135 aa13.53□□□□□ -0.24
RPL39-202ENST00000468844 RAB31Q13636 194 aa13.53□□□□□ -0.24
RPL39-202ENST00000468844 TIGITQ495A1 244 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms