RNA–Protein interactions for RNA: ENST00000468807.1

TTC28-204, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 2

Gene TTC28, Length 594 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-204ENST00000468807 LINC00476Q8WZB0 136 aa16■□□□□ 0.15
TTC28-204ENST00000468807 TMEM56-RWDD3S4R434 201 aa16■□□□□ 0.15
TTC28-204ENST00000468807 TRAV2A0A0B4J234 112 aa15.99■□□□□ 0.15
TTC28-204ENST00000468807 FABP12A6NFH5 140 aa15.99■□□□□ 0.15
TTC28-204ENST00000468807 GSTZ1O43708 216 aaPredicted RBP15.99■□□□□ 0.15
TTC28-204ENST00000468807 SULT1A3P0DMM9 295 aa15.99■□□□□ 0.15
TTC28-204ENST00000468807 SULT1A4P0DMN0 295 aa15.99■□□□□ 0.15
TTC28-204ENST00000468807 AKR1C4P17516 323 aa15.99■□□□□ 0.15
TTC28-204ENST00000468807 C2orf83Q53S99 150 aa15.99■□□□□ 0.15
TTC28-204ENST00000468807 STHQ8IWL8 128 aa15.99■□□□□ 0.15
TTC28-204ENST00000468807 OR11H2Q8NH07 326 aa15.99■□□□□ 0.15
TTC28-204ENST00000468807 RNASEH2CQ8TDP1 164 aaKnown RBP15.99■□□□□ 0.15
TTC28-204ENST00000468807 SCGB3A2Q96PL1 93 aa15.99■□□□□ 0.15
TTC28-204ENST00000468807 KLK5Q9Y337 293 aaPredicted RBP15.99■□□□□ 0.15
TTC28-204ENST00000468807 SLC25A4P12235 298 aa15.98■□□□□ 0.15
TTC28-204ENST00000468807 ATF4P18848 351 aaPredicted RBP15.98■□□□□ 0.15
TTC28-204ENST00000468807 NPY1RP25929 384 aa15.98■□□□□ 0.15
TTC28-204ENST00000468807 CRYBB3P26998 211 aa15.98■□□□□ 0.15
TTC28-204ENST00000468807 OR10J1P30954 320 aa15.98■□□□□ 0.15
TTC28-204ENST00000468807 TMEM187Q14656 261 aa15.98■□□□□ 0.15
TTC28-204ENST00000468807 RBMS2Q15434 407 aaKnown RBP15.98■□□□□ 0.15
TTC28-204ENST00000468807 PRSS54Q6PEW0 395 aa15.98■□□□□ 0.15
TTC28-204ENST00000468807 OR1S2Q8NGQ3 325 aa15.98■□□□□ 0.15
TTC28-204ENST00000468807 MCFD2Q8NI22 146 aa15.98■□□□□ 0.15
TTC28-204ENST00000468807 Q8WTZ3 238 aa15.98■□□□□ 0.15
TTC28-204ENST00000468807 GRAMD2BQ96HH9 432 aa15.98■□□□□ 0.15
TTC28-204ENST00000468807 SLIRPQ9GZT3 109 aaKnown RBP15.98■□□□□ 0.15
TTC28-204ENST00000468807 H3BMQ9 156 aa15.97■□□□□ 0.15
TTC28-204ENST00000468807 ZNF688P0C7X2 276 aa15.97■□□□□ 0.15
TTC28-204ENST00000468807 IGLC1P0CG04 106 aa15.97■□□□□ 0.15
TTC28-204ENST00000468807 TNFSF8P32971 234 aa15.97■□□□□ 0.15
TTC28-204ENST00000468807 ETFRF1Q6IPR1 90 aa15.97■□□□□ 0.15
TTC28-204ENST00000468807 IL22RA2Q969J5 263 aa15.97■□□□□ 0.15
TTC28-204ENST00000468807 ACY3Q96HD9 319 aa15.97■□□□□ 0.15
TTC28-204ENST00000468807 IFNA10P01566 189 aa15.96■□□□□ 0.15
TTC28-204ENST00000468807 PHLDA1Q8WV24 401 aaPredicted RBP15.96■□□□□ 0.15
TTC28-204ENST00000468807 CACFD1Q9UGQ2 172 aa15.96■□□□□ 0.15
TTC28-204ENST00000468807 AGRNO00468 2067 aa15.96■□□□□ 0.15
TTC28-204ENST00000468807 K7EQG2 157 aa15.95■□□□□ 0.14
TTC28-204ENST00000468807 HNRNPCP07910 306 aaKnown RBP eCLIP15.95■□□□□ 0.14
TTC28-204ENST00000468807 ANXA3P12429 323 aa15.95■□□□□ 0.14
TTC28-204ENST00000468807 EIF2B2P49770 351 aaKnown RBP15.95■□□□□ 0.14
TTC28-204ENST00000468807 LYZL2Q7Z4W2 148 aa15.95■□□□□ 0.14
TTC28-204ENST00000468807 NOXA1Q86UR1 476 aa15.95■□□□□ 0.14
TTC28-204ENST00000468807 TMEM170AQ8WVE7 144 aa15.95■□□□□ 0.14
TTC28-204ENST00000468807 NPIPB3Q92617 1050 aa15.95■□□□□ 0.14
TTC28-204ENST00000468807 DEFB4AO15263 64 aa15.94■□□□□ 0.14
TTC28-204ENST00000468807 IL4P05112 153 aa15.94■□□□□ 0.14
TTC28-204ENST00000468807 CCR6P51684 374 aa15.94■□□□□ 0.14
TTC28-204ENST00000468807 YPEL3P61236 119 aaPredicted RBP15.94■□□□□ 0.14
TTC28-204ENST00000468807 SMCO1Q147U7 214 aa15.94■□□□□ 0.14
TTC28-204ENST00000468807 NMSQ5H8A3 153 aa15.94■□□□□ 0.14
TTC28-204ENST00000468807 TMED4Q7Z7H5 227 aa15.94■□□□□ 0.14
TTC28-204ENST00000468807 FBXL17Q9UF56 701 aa15.94■□□□□ 0.14
TTC28-204ENST00000468807 A0A0B4J2A0 478 aa15.93■□□□□ 0.14
TTC28-204ENST00000468807 HELTA6NFD8 242 aa15.93■□□□□ 0.14
TTC28-204ENST00000468807 KNCNA6PVL3 124 aa15.93■□□□□ 0.14
TTC28-204ENST00000468807 FAUP35544 74 aaKnown RBP15.93■□□□□ 0.14
TTC28-204ENST00000468807 NANOS2P60321 138 aaKnown RBP15.93■□□□□ 0.14
TTC28-204ENST00000468807 DHRS2Q13268 280 aa15.93■□□□□ 0.14
TTC28-204ENST00000468807 PYDC2Q56P42 97 aa15.93■□□□□ 0.14
TTC28-204ENST00000468807 LGI3Q8N145 548 aa15.93■□□□□ 0.14
TTC28-204ENST00000468807 C11orf45Q8TAV5 145 aa15.93■□□□□ 0.14
TTC28-204ENST00000468807 DTD1Q8TEA8 209 aa15.93■□□□□ 0.14
TTC28-204ENST00000468807 RBKSQ9H477 322 aa15.93■□□□□ 0.14
TTC28-204ENST00000468807 SHPKQ9UHJ6 478 aa15.93■□□□□ 0.14
TTC28-204ENST00000468807 CCDC160A6NGH7 325 aa15.92■□□□□ 0.14
TTC28-204ENST00000468807 RD3LP0DJH9 198 aa15.92■□□□□ 0.14
TTC28-204ENST00000468807 SUPT4H1P63272 117 aaKnown RBP15.92■□□□□ 0.14
TTC28-204ENST00000468807 SRPXP78539 464 aa15.92■□□□□ 0.14
TTC28-204ENST00000468807 USF2Q15853 346 aaPredicted RBP15.92■□□□□ 0.14
TTC28-204ENST00000468807 ACTL10Q5JWF8 245 aa15.92■□□□□ 0.14
TTC28-204ENST00000468807 OR1S1Q8NH92 325 aa15.92■□□□□ 0.14
TTC28-204ENST00000468807 DCANP1Q8TF63 244 aa15.92■□□□□ 0.14
TTC28-204ENST00000468807 SOSTQ9BQB4 213 aa15.92■□□□□ 0.14
TTC28-204ENST00000468807 C11orf68Q9H3H3 251 aaKnown RBP15.92■□□□□ 0.14
TTC28-204ENST00000468807 HSPB7Q9UBY9 170 aa15.92■□□□□ 0.14
TTC28-204ENST00000468807 U3KQ87 197 aa15.92■□□□□ 0.14
TTC28-204ENST00000468807 KMT2AQ03164 3969 aa15.91■□□□□ 0.14
TTC28-204ENST00000468807 IFNA4P05014 189 aa15.91■□□□□ 0.14
TTC28-204ENST00000468807 C16orf54Q6UWD8 224 aa15.91■□□□□ 0.14
TTC28-204ENST00000468807 TRPT1Q86TN4 253 aaKnown RBP15.91■□□□□ 0.14
TTC28-204ENST00000468807 TOMM5Q8N4H5 51 aa15.91■□□□□ 0.14
TTC28-204ENST00000468807 MFFQ9GZY8 342 aa15.91■□□□□ 0.14
TTC28-204ENST00000468807 U3KQE9 123 aa15.91■□□□□ 0.14
TTC28-204ENST00000468807 TOMM40O96008 361 aa15.9■□□□□ 0.14
TTC28-204ENST00000468807 AP2S1P53680 142 aaPredicted RBP15.9■□□□□ 0.14
TTC28-204ENST00000468807 AP3S2P59780 193 aa15.9■□□□□ 0.14
TTC28-204ENST00000468807 PSMG4Q5JS54 123 aa15.9■□□□□ 0.14
TTC28-204ENST00000468807 GLMPQ8WWB7 406 aa15.9■□□□□ 0.14
TTC28-204ENST00000468807 SPP1P10451 314 aa15.89■□□□□ 0.13
TTC28-204ENST00000468807 KLF9Q13886 244 aaPredicted RBP15.89■□□□□ 0.13
TTC28-204ENST00000468807 OR51G1Q8NGK1 321 aa15.89■□□□□ 0.13
TTC28-204ENST00000468807 PBDC1Q9BVG4 233 aa15.89■□□□□ 0.13
TTC28-204ENST00000468807 PSG1P11464 419 aa15.88■□□□□ 0.13
TTC28-204ENST00000468807 VAMP1P23763 118 aa15.88■□□□□ 0.13
TTC28-204ENST00000468807 MORN3Q6PF18 240 aaPredicted RBP15.88■□□□□ 0.13
TTC28-204ENST00000468807 PAIP2BQ9ULR5 123 aaKnown RBP15.88■□□□□ 0.13
TTC28-204ENST00000468807 ZFP92A6NM28 416 aa15.87■□□□□ 0.13
TTC28-204ENST00000468807 C4BPBP20851 252 aa15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 115.7 ms