RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 GFRALQ6UXV0 394 aa12.77□□□□□ -0.36
TSPAN4-211ENST00000468468 SVIPQ8NHG7 77 aa12.77□□□□□ -0.36
TSPAN4-211ENST00000468468 FBXL7Q9UJT9 491 aa12.77□□□□□ -0.36
TSPAN4-211ENST00000468468 AMY1AP04745 511 aa12.77□□□□□ -0.37
TSPAN4-211ENST00000468468 TMEM177Q53S58 311 aa12.77□□□□□ -0.37
TSPAN4-211ENST00000468468 MRPL52Q86TS9 123 aaKnown RBP12.77□□□□□ -0.37
TSPAN4-211ENST00000468468 OR5AN1Q8NGI8 311 aa12.77□□□□□ -0.37
TSPAN4-211ENST00000468468 ZNF714Q96N38 554 aa12.77□□□□□ -0.37
TSPAN4-211ENST00000468468 ALKBH7Q9BT30 221 aaPredicted RBP12.77□□□□□ -0.37
TSPAN4-211ENST00000468468 VAMP8Q9BV40 100 aa12.77□□□□□ -0.37
TSPAN4-211ENST00000468468 RNF24Q9Y225 148 aa12.77□□□□□ -0.37
TSPAN4-211ENST00000468468 ADGRG4Q8IZF6 3080 aa12.77□□□□□ -0.37
TSPAN4-211ENST00000468468 COX7A2P2O60397 106 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 CA1P00915 261 aaPredicted RBP12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 IGHV3-48P01763 117 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 PYYP10082 97 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 TNFRSF1AP19438 455 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 KRTDAPP60985 99 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 MEF2CQ06413 473 aaPredicted RBP12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 OR10J3Q5JRS4 329 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 ASPHD1Q5U4P2 390 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 RNF114Q9Y508 228 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 ZNF253O75346 499 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 USF1P22415 310 aaPredicted RBP12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 COMPP49747 757 aaPredicted RBP12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 C10orf55Q5SWW7 151 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 TMEM200BQ69YZ2 307 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 NUP37Q8NFH4 326 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 ZNF355PQ9NSJ1 428 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 CDC42EP3Q9UKI2 254 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 TBL2Q9Y4P3 447 aaKnown RBP12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 PLCE1Q9P212 2302 aa12.76□□□□□ -0.37
TSPAN4-211ENST00000468468 A0A1W2PN81 502 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 K7ENP7 123 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 HLA-DQA1P01909 254 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 SRIP30626 198 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 AMTP48728 403 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 WT1-ASQ06250 92 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 C10orf113Q5VZT2 155 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 FAM168AQ92567 244 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 NPIPB3Q92617 1050 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 RCHY1Q96PM5 261 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 SSBP3Q9BWW4 388 aaPredicted RBP12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 FNDC4Q9H6D8 234 aaPredicted RBP12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 ZNF586Q9NXT0 402 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 AMMECR1Q9Y4X0 333 aaPredicted RBP12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 PCNX1Q96RV3 2341 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 IZUMO1RA6ND01 250 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 BMPR1BO00238 502 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 FAM87AP0C7U9 286 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 DIAPH2-AS1Q14236 149 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 OR10X1Q8NGY0 326 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 TMEM167AQ8TBQ9 72 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 H1FXQ92522 213 aaKnown RBP12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 PAXXQ9BUH6 204 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 NRN1Q9NPD7 142 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 TRAV34A0A0B4J273 112 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 A0A1W2PS18 150 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 FCN3O75636 299 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 PMCHP20382 165 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 TMEM108Q6UXF1 575 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 OR4C13Q8NGP0 309 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 KCNS1Q96KK3 526 aa12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 ZNF430Q9H8G1 570 aaPredicted RBP12.75□□□□□ -0.37
TSPAN4-211ENST00000468468 CGB1A6NKQ9 187 aa12.74□□□□□ -0.37
TSPAN4-211ENST00000468468 C17orf100A8MU93 164 aa12.74□□□□□ -0.37
TSPAN4-211ENST00000468468 INS-IGF2F8WCM5 200 aa12.74□□□□□ -0.37
TSPAN4-211ENST00000468468 UNQ5815/PRO19632Q6UWF5 114 aa12.74□□□□□ -0.37
TSPAN4-211ENST00000468468 PATE2Q6UY27 113 aa12.74□□□□□ -0.37
TSPAN4-211ENST00000468468 WFDC8Q8IUA0 241 aa12.74□□□□□ -0.37
TSPAN4-211ENST00000468468 OR1L4Q8NGR5 311 aa12.74□□□□□ -0.37
TSPAN4-211ENST00000468468 ZNF331Q9NQX6 463 aaPredicted RBP12.74□□□□□ -0.37
TSPAN4-211ENST00000468468 DIRC3C9JPN6 131 aa12.74□□□□□ -0.37
TSPAN4-211ENST00000468468 APCSP02743 223 aa12.74□□□□□ -0.37
TSPAN4-211ENST00000468468 VSTM2AQ8TAG5 236 aa12.74□□□□□ -0.37
TSPAN4-211ENST00000468468 TCRBV4S1A1TA0A5B7 111 aa12.73□□□□□ -0.37
TSPAN4-211ENST00000468468 SUB1P53999 127 aaKnown RBP eCLIP12.73□□□□□ -0.37
TSPAN4-211ENST00000468468 ADIPOQQ15848 244 aa12.73□□□□□ -0.37
TSPAN4-211ENST00000468468 ERASQ7Z444 233 aa12.73□□□□□ -0.37
TSPAN4-211ENST00000468468 ZNF329Q86UD4 541 aa12.73□□□□□ -0.37
TSPAN4-211ENST00000468468 OR4A5Q8NH83 315 aa12.73□□□□□ -0.37
TSPAN4-211ENST00000468468 PTPRQQ9UMZ3 2332 aa12.73□□□□□ -0.37
TSPAN4-211ENST00000468468 C16orf97H3BN30 126 aa12.73□□□□□ -0.37
TSPAN4-211ENST00000468468 PDPNQ86YL7 162 aa12.73□□□□□ -0.37
TSPAN4-211ENST00000468468 IGKV1D-37A0A075B6S9 117 aa12.72□□□□□ -0.37
TSPAN4-211ENST00000468468 PPIAL4EA0A075B759 164 aa12.72□□□□□ -0.37
TSPAN4-211ENST00000468468 PPIAL4DF5H284 164 aa12.72□□□□□ -0.37
TSPAN4-211ENST00000468468 K7EP13 123 aa12.72□□□□□ -0.37
TSPAN4-211ENST00000468468 PEX7O00628 323 aa12.72□□□□□ -0.37
TSPAN4-211ENST00000468468 PPIAL4FP0DN26 164 aa12.72□□□□□ -0.37
TSPAN4-211ENST00000468468 Q8N976 141 aa12.72□□□□□ -0.37
TSPAN4-211ENST00000468468 MRPL36Q9P0J6 103 aaKnown RBP12.72□□□□□ -0.37
TSPAN4-211ENST00000468468 ARFGEF3Q5TH69 2177 aa12.72□□□□□ -0.37
TSPAN4-211ENST00000468468 LYPD2Q6UXB3 125 aa12.72□□□□□ -0.37
TSPAN4-211ENST00000468468 CCL17Q92583 94 aa12.72□□□□□ -0.37
TSPAN4-211ENST00000468468 TMEM186Q96B77 213 aa12.72□□□□□ -0.37
TSPAN4-211ENST00000468468 VPS25Q9BRG1 176 aa12.72□□□□□ -0.37
TSPAN4-211ENST00000468468 DPRXA6NFQ7 191 aa12.71□□□□□ -0.37
TSPAN4-211ENST00000468468 ZNF324O75467 553 aaPredicted RBP12.71□□□□□ -0.37
TSPAN4-211ENST00000468468 PLAUP00749 431 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms