RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 LGALS9CQ6DKI2 356 aa17.81■□□□□ 0.44
PTCH1-210ENST00000468211 Q8NAQ8 132 aa17.81■□□□□ 0.44
PTCH1-210ENST00000468211 MFFQ9GZY8 342 aa17.81■□□□□ 0.44
PTCH1-210ENST00000468211 PRR13Q9NZ81 148 aa17.81■□□□□ 0.44
PTCH1-210ENST00000468211 TRAV30A0A087WSZ9 112 aa17.8■□□□□ 0.44
PTCH1-210ENST00000468211 DISC1C4P0D8 188 aa17.8■□□□□ 0.44
PTCH1-210ENST00000468211 C4BPBP20851 252 aa17.8■□□□□ 0.44
PTCH1-210ENST00000468211 DHODHQ02127 395 aa17.8■□□□□ 0.44
PTCH1-210ENST00000468211 SURF2Q15527 256 aaPredicted RBP17.8■□□□□ 0.44
PTCH1-210ENST00000468211 GRAMD2BQ96HH9 432 aa17.8■□□□□ 0.44
PTCH1-210ENST00000468211 RPS10-NUDT3A0A1W2PQS6 291 aa17.79■□□□□ 0.44
PTCH1-210ENST00000468211 AKAIN1P0CW23 69 aa17.79■□□□□ 0.44
PTCH1-210ENST00000468211 RBMY1A1P0DJD3 496 aaKnown RBP17.79■□□□□ 0.44
PTCH1-210ENST00000468211 RBMY1CP0DJD4 496 aa17.79■□□□□ 0.44
PTCH1-210ENST00000468211 RBMY1FQ15415 496 aaKnown RBP17.79■□□□□ 0.44
PTCH1-210ENST00000468211 GPR141Q7Z602 305 aa17.79■□□□□ 0.44
PTCH1-210ENST00000468211 SLC24A4Q8NFF2 622 aa17.79■□□□□ 0.44
PTCH1-210ENST00000468211 OR51S1Q8NGJ8 323 aa17.79■□□□□ 0.44
PTCH1-210ENST00000468211 MRPS26Q9BYN8 205 aaKnown RBP17.79■□□□□ 0.44
PTCH1-210ENST00000468211 CEBPZOSA8MTT3 80 aa17.78■□□□□ 0.44
PTCH1-210ENST00000468211 OR10J1P30954 320 aa17.78■□□□□ 0.44
PTCH1-210ENST00000468211 OR1S2Q8NGQ3 325 aa17.78■□□□□ 0.44
PTCH1-210ENST00000468211 RNASEH2CQ8TDP1 164 aaKnown RBP17.78■□□□□ 0.44
PTCH1-210ENST00000468211 GLMPQ8WWB7 406 aa17.78■□□□□ 0.44
PTCH1-210ENST00000468211 TMEM56-RWDD3S4R434 201 aa17.78■□□□□ 0.44
PTCH1-210ENST00000468211 IGHV4-28A0A0C4DH34 117 aa17.77■□□□□ 0.44
PTCH1-210ENST00000468211 CTDSPLO15194 276 aa17.77■□□□□ 0.44
PTCH1-210ENST00000468211 SCGB2A1O75556 95 aa17.77■□□□□ 0.44
PTCH1-210ENST00000468211 IFNA4P05014 189 aa17.77■□□□□ 0.44
PTCH1-210ENST00000468211 IL18Q14116 193 aa17.77■□□□□ 0.44
PTCH1-210ENST00000468211 USF2Q15853 346 aaPredicted RBP17.77■□□□□ 0.44
PTCH1-210ENST00000468211 ACTL10Q5JWF8 245 aa17.77■□□□□ 0.44
PTCH1-210ENST00000468211 C16orf54Q6UWD8 224 aa17.77■□□□□ 0.44
PTCH1-210ENST00000468211 Q8WTZ3 238 aa17.77■□□□□ 0.44
PTCH1-210ENST00000468211 DIRAS2Q96HU8 199 aa17.77■□□□□ 0.44
PTCH1-210ENST00000468211 HNRNPCP07910 306 aaKnown RBP eCLIP17.76■□□□□ 0.43
PTCH1-210ENST00000468211 SLC25A4P12235 298 aa17.76■□□□□ 0.43
PTCH1-210ENST00000468211 YPEL3P61236 119 aaPredicted RBP17.76■□□□□ 0.43
PTCH1-210ENST00000468211 PRR20EP86478 221 aa17.76■□□□□ 0.43
PTCH1-210ENST00000468211 PRR20CP86479 221 aa17.76■□□□□ 0.43
PTCH1-210ENST00000468211 PRR20DP86480 221 aa17.76■□□□□ 0.43
PTCH1-210ENST00000468211 PRR20BP86481 221 aa17.76■□□□□ 0.43
PTCH1-210ENST00000468211 PRR20AP86496 221 aa17.76■□□□□ 0.43
PTCH1-210ENST00000468211 DHRS2Q13268 280 aa17.76■□□□□ 0.43
PTCH1-210ENST00000468211 NPIPB3Q92617 1050 aa17.76■□□□□ 0.43
PTCH1-210ENST00000468211 NARS2Q96I59 477 aaKnown RBP17.76■□□□□ 0.43
PTCH1-210ENST00000468211 NMSQ5H8A3 153 aa17.75■□□□□ 0.43
PTCH1-210ENST00000468211 CLVS1Q8IUQ0 354 aaPredicted RBP17.75■□□□□ 0.43
PTCH1-210ENST00000468211 DYNC2LI1Q8TCX1 351 aa17.75■□□□□ 0.43
PTCH1-210ENST00000468211 C2CD4CQ8TF44 421 aa17.75■□□□□ 0.43
PTCH1-210ENST00000468211 PRRT1Q99946 306 aa17.75■□□□□ 0.43
PTCH1-210ENST00000468211 CLEC5AQ9NY25 188 aa17.75■□□□□ 0.43
PTCH1-210ENST00000468211 X6R8D5 127 aa17.75■□□□□ 0.43
PTCH1-210ENST00000468211 DNAH6Q9C0G6 4158 aa17.74■□□□□ 0.43
PTCH1-210ENST00000468211 ANKRD20A5PA0PJZ0 165 aa17.74■□□□□ 0.43
PTCH1-210ENST00000468211 IL4P05112 153 aa17.74■□□□□ 0.43
PTCH1-210ENST00000468211 SPP1P10451 314 aa17.74■□□□□ 0.43
PTCH1-210ENST00000468211 NPY1RP25929 384 aa17.74■□□□□ 0.43
PTCH1-210ENST00000468211 PSMG4Q5JS54 123 aa17.74■□□□□ 0.43
PTCH1-210ENST00000468211 MORN3Q6PF18 240 aaPredicted RBP17.74■□□□□ 0.43
PTCH1-210ENST00000468211 CSNK1G2-AS1Q8NCQ2 148 aa17.74■□□□□ 0.43
PTCH1-210ENST00000468211 ACY3Q96HD9 319 aa17.74■□□□□ 0.43
PTCH1-210ENST00000468211 RAB40CQ96S21 281 aa17.74■□□□□ 0.43
PTCH1-210ENST00000468211 HELTA6NFD8 242 aa17.73■□□□□ 0.43
PTCH1-210ENST00000468211 ZNF705EA8MWA4 302 aaPredicted RBP17.73■□□□□ 0.43
PTCH1-210ENST00000468211 SULT1A3P0DMM9 295 aa17.73■□□□□ 0.43
PTCH1-210ENST00000468211 SULT1A4P0DMN0 295 aa17.73■□□□□ 0.43
PTCH1-210ENST00000468211 ELOA3CA0A087WX78 387 aaPredicted RBP17.72■□□□□ 0.43
PTCH1-210ENST00000468211 GSTZ1O43708 216 aaPredicted RBP17.72■□□□□ 0.43
PTCH1-210ENST00000468211 SUPT4H1P63272 117 aaKnown RBP17.72■□□□□ 0.43
PTCH1-210ENST00000468211 IL22RA2Q969J5 263 aa17.72■□□□□ 0.43
PTCH1-210ENST00000468211 HRH4Q9H3N8 390 aa17.72■□□□□ 0.43
PTCH1-210ENST00000468211 CCDC59Q9P031 241 aaKnown RBP17.72■□□□□ 0.43
PTCH1-210ENST00000468211 APLNQ9ULZ1 77 aa17.72■□□□□ 0.43
PTCH1-210ENST00000468211 TOMM40O96008 361 aa17.71■□□□□ 0.43
PTCH1-210ENST00000468211 HLA-DMBP28068 263 aa17.71■□□□□ 0.43
PTCH1-210ENST00000468211 TMEM41BQ5BJD5 291 aa17.71■□□□□ 0.43
PTCH1-210ENST00000468211 ETFRF1Q6IPR1 90 aa17.71■□□□□ 0.43
PTCH1-210ENST00000468211 LYZL2Q7Z4W2 148 aa17.71■□□□□ 0.43
PTCH1-210ENST00000468211 KCNIP3Q9Y2W7 256 aa17.71■□□□□ 0.43
PTCH1-210ENST00000468211 IGLL5B9A064 214 aa17.7■□□□□ 0.42
PTCH1-210ENST00000468211 FAM90A26D6RGX4 464 aa17.7■□□□□ 0.42
PTCH1-210ENST00000468211 BUB3O43684 328 aa17.7■□□□□ 0.42
PTCH1-210ENST00000468211 RD3LP0DJH9 198 aa17.7■□□□□ 0.42
PTCH1-210ENST00000468211 PSG1P11464 419 aa17.7■□□□□ 0.42
PTCH1-210ENST00000468211 MIFP14174 115 aa17.7■□□□□ 0.42
PTCH1-210ENST00000468211 EIF2B2P49770 351 aaKnown RBP17.7■□□□□ 0.42
PTCH1-210ENST00000468211 RAB2BQ8WUD1 216 aa17.7■□□□□ 0.42
PTCH1-210ENST00000468211 SOSTQ9BQB4 213 aa17.7■□□□□ 0.42
PTCH1-210ENST00000468211 RBKSQ9H477 322 aa17.7■□□□□ 0.42
PTCH1-210ENST00000468211 HSPB7Q9UBY9 170 aa17.7■□□□□ 0.42
PTCH1-210ENST00000468211 IFNA10P01566 189 aa17.69■□□□□ 0.42
PTCH1-210ENST00000468211 AKR1C4P17516 323 aa17.69■□□□□ 0.42
PTCH1-210ENST00000468211 AP2S1P53680 142 aaPredicted RBP17.69■□□□□ 0.42
PTCH1-210ENST00000468211 Q6ZTC4 211 aa17.69■□□□□ 0.42
PTCH1-210ENST00000468211 OR51G1Q8NGK1 321 aa17.69■□□□□ 0.42
PTCH1-210ENST00000468211 MCUBQ9NWR8 336 aa17.69■□□□□ 0.42
PTCH1-210ENST00000468211 RABL2AQ9UBK7 228 aaPredicted RBP17.69■□□□□ 0.42
PTCH1-210ENST00000468211 RABL2BQ9UNT1 228 aa17.69■□□□□ 0.42
PTCH1-210ENST00000468211 A0A0B4J2A0 478 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms