RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 GLYATL2Q8WU03 294 aa15.29■□□□□ 0.04
COL9A3-207ENST00000467819 RBPMSQ93062 196 aaKnown RBP15.29■□□□□ 0.04
COL9A3-207ENST00000467819 MIXL1Q9H2W2 232 aa15.29■□□□□ 0.04
COL9A3-207ENST00000467819 NAA60Q9H7X0 242 aa15.29■□□□□ 0.04
COL9A3-207ENST00000467819 CLEC5AQ9NY25 188 aa15.29■□□□□ 0.04
COL9A3-207ENST00000467819 C11orf94C9JXX5 98 aa15.28■□□□□ 0.04
COL9A3-207ENST00000467819 GABARAPH6UMI1 98 aa15.28■□□□□ 0.04
COL9A3-207ENST00000467819 IGLC1P0CG04 106 aa15.28■□□□□ 0.04
COL9A3-207ENST00000467819 MIFP14174 115 aa15.28■□□□□ 0.04
COL9A3-207ENST00000467819 EIF2B2P49770 351 aaKnown RBP15.28■□□□□ 0.04
COL9A3-207ENST00000467819 TCTAP57738 103 aa15.28■□□□□ 0.04
COL9A3-207ENST00000467819 AARDQ4LEZ3 155 aa15.28■□□□□ 0.04
COL9A3-207ENST00000467819 PRSS54Q6PEW0 395 aa15.28■□□□□ 0.04
COL9A3-207ENST00000467819 SELENOHQ8IZQ5 122 aaKnown RBP15.28■□□□□ 0.04
COL9A3-207ENST00000467819 OR1S2Q8NGQ3 325 aa15.28■□□□□ 0.04
COL9A3-207ENST00000467819 OR52E5Q8NH55 327 aa15.28■□□□□ 0.04
COL9A3-207ENST00000467819 Q8WTZ3 238 aa15.28■□□□□ 0.04
COL9A3-207ENST00000467819 GPR146Q96CH1 333 aa15.28■□□□□ 0.04
COL9A3-207ENST00000467819 RTBDNQ9BSG5 229 aaPredicted RBP15.28■□□□□ 0.04
COL9A3-207ENST00000467819 HRH4Q9H3N8 390 aa15.28■□□□□ 0.04
COL9A3-207ENST00000467819 APLNQ9ULZ1 77 aa15.28■□□□□ 0.04
COL9A3-207ENST00000467819 CEBPZOSA8MTT3 80 aa15.27■□□□□ 0.04
COL9A3-207ENST00000467819 RGS5O15539 181 aa15.27■□□□□ 0.04
COL9A3-207ENST00000467819 NXPH3O95157 252 aa15.27■□□□□ 0.04
COL9A3-207ENST00000467819 HNRNPCP07910 306 aaKnown RBP eCLIP15.27■□□□□ 0.04
COL9A3-207ENST00000467819 SMIM18P0DKX4 95 aa15.27■□□□□ 0.04
COL9A3-207ENST00000467819 HLA-DMBP28068 263 aa15.27■□□□□ 0.04
COL9A3-207ENST00000467819 OR10J1P30954 320 aa15.27■□□□□ 0.04
COL9A3-207ENST00000467819 MEF2DQ14814 521 aa15.27■□□□□ 0.04
COL9A3-207ENST00000467819 C2orf83Q53S99 150 aa15.27■□□□□ 0.04
COL9A3-207ENST00000467819 PSMG4Q5JS54 123 aa15.27■□□□□ 0.04
COL9A3-207ENST00000467819 TMEM268Q5VZI3 342 aa15.27■□□□□ 0.04
COL9A3-207ENST00000467819 SLC24A4Q8NFF2 622 aa15.27■□□□□ 0.04
COL9A3-207ENST00000467819 GLMPQ8WWB7 406 aa15.27■□□□□ 0.04
COL9A3-207ENST00000467819 U3KQE9 123 aa15.27■□□□□ 0.04
COL9A3-207ENST00000467819 X6R8D5 127 aa15.27■□□□□ 0.04
COL9A3-207ENST00000467819 HELTA6NFD8 242 aa15.26■□□□□ 0.03
COL9A3-207ENST00000467819 ZNF705EA8MWA4 302 aaPredicted RBP15.26■□□□□ 0.03
COL9A3-207ENST00000467819 SLC25A4P12235 298 aa15.26■□□□□ 0.03
COL9A3-207ENST00000467819 DHODHQ02127 395 aa15.26■□□□□ 0.03
COL9A3-207ENST00000467819 C16orf54Q6UWD8 224 aa15.26■□□□□ 0.03
COL9A3-207ENST00000467819 Q6ZTC4 211 aa15.26■□□□□ 0.03
COL9A3-207ENST00000467819 RNASEH2CQ8TDP1 164 aaKnown RBP15.26■□□□□ 0.03
COL9A3-207ENST00000467819 DISC1C4P0D8 188 aa15.25■□□□□ 0.03
COL9A3-207ENST00000467819 IL4P05112 153 aa15.25■□□□□ 0.03
COL9A3-207ENST00000467819 YPEL3P61236 119 aaPredicted RBP15.25■□□□□ 0.03
COL9A3-207ENST00000467819 SSBP1Q04837 148 aaKnown RBP15.25■□□□□ 0.03
COL9A3-207ENST00000467819 USF2Q15853 346 aaPredicted RBP15.25■□□□□ 0.03
COL9A3-207ENST00000467819 TMEM170AQ8WVE7 144 aa15.25■□□□□ 0.03
COL9A3-207ENST00000467819 RAB40CQ96S21 281 aa15.25■□□□□ 0.03
COL9A3-207ENST00000467819 TBC1D24Q9ULP9 559 aa15.25■□□□□ 0.03
COL9A3-207ENST00000467819 ELOA3CA0A087WX78 387 aaPredicted RBP15.24■□□□□ 0.03
COL9A3-207ENST00000467819 MRPS10P82664 201 aaKnown RBP15.24■□□□□ 0.03
COL9A3-207ENST00000467819 CENPSQ8N2Z9 138 aa15.24■□□□□ 0.03
COL9A3-207ENST00000467819 OR4C16Q8NGL9 310 aa15.24■□□□□ 0.03
COL9A3-207ENST00000467819 ACY3Q96HD9 319 aa15.24■□□□□ 0.03
COL9A3-207ENST00000467819 TRAV10A0A0B4J240 114 aa15.23■□□□□ 0.03
COL9A3-207ENST00000467819 CRYM-AS1A6NIL9 109 aa15.23■□□□□ 0.03
COL9A3-207ENST00000467819 CTDSP2O14595 271 aa15.23■□□□□ 0.03
COL9A3-207ENST00000467819 NPY1RP25929 384 aa15.23■□□□□ 0.03
COL9A3-207ENST00000467819 AP2S1P53680 142 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-207ENST00000467819 SURF2Q15527 256 aaPredicted RBP15.23■□□□□ 0.03
COL9A3-207ENST00000467819 CSNK1G2-AS1Q8NCQ2 148 aa15.23■□□□□ 0.03
COL9A3-207ENST00000467819 SMIM4Q8WVI0 70 aa15.23■□□□□ 0.03
COL9A3-207ENST00000467819 NPIPB3Q92617 1050 aa15.23■□□□□ 0.03
COL9A3-207ENST00000467819 KRTAP17-1Q9BYP8 105 aa15.23■□□□□ 0.03
COL9A3-207ENST00000467819 PRR13Q9NZ81 148 aa15.23■□□□□ 0.03
COL9A3-207ENST00000467819 GPR132Q9UNW8 380 aa15.23■□□□□ 0.03
COL9A3-207ENST00000467819 HERC2O95714 4834 aa15.23■□□□□ 0.03
COL9A3-207ENST00000467819 FAM90A26D6RGX4 464 aa15.22■□□□□ 0.03
COL9A3-207ENST00000467819 AKAIN1P0CW23 69 aa15.22■□□□□ 0.03
COL9A3-207ENST00000467819 ETFRF1Q6IPR1 90 aa15.22■□□□□ 0.03
COL9A3-207ENST00000467819 CELA1Q9UNI1 258 aa15.22■□□□□ 0.03
COL9A3-207ENST00000467819 IGHV4-4A0A075B6R2 117 aa15.21■□□□□ 0.03
COL9A3-207ENST00000467819 SULT1A3P0DMM9 295 aa15.21■□□□□ 0.03
COL9A3-207ENST00000467819 SULT1A4P0DMN0 295 aa15.21■□□□□ 0.03
COL9A3-207ENST00000467819 SNRPD3P62318 126 aaKnown RBP15.21■□□□□ 0.03
COL9A3-207ENST00000467819 ZNF767PQ75MW2 155 aa15.21■□□□□ 0.03
COL9A3-207ENST00000467819 NRN1Q9NPD7 142 aa15.21■□□□□ 0.03
COL9A3-207ENST00000467819 TMEM56-RWDD3S4R434 201 aa15.21■□□□□ 0.03
COL9A3-207ENST00000467819 TOMM40O96008 361 aa15.2■□□□□ 0.02
COL9A3-207ENST00000467819 IFNA10P01566 189 aa15.2■□□□□ 0.02
COL9A3-207ENST00000467819 RD3LP0DJH9 198 aa15.2■□□□□ 0.02
COL9A3-207ENST00000467819 IL18Q14116 193 aa15.2■□□□□ 0.02
COL9A3-207ENST00000467819 SPCS2Q15005 226 aa15.2■□□□□ 0.02
COL9A3-207ENST00000467819 SIGLEC15Q6ZMC9 328 aa15.2■□□□□ 0.02
COL9A3-207ENST00000467819 OR51S1Q8NGJ8 323 aa15.2■□□□□ 0.02
COL9A3-207ENST00000467819 XCL2Q9UBD3 114 aa15.2■□□□□ 0.02
COL9A3-207ENST00000467819 GSTZ1O43708 216 aaPredicted RBP15.19■□□□□ 0.02
COL9A3-207ENST00000467819 NMSQ5H8A3 153 aa15.19■□□□□ 0.02
COL9A3-207ENST00000467819 GPR141Q7Z602 305 aa15.19■□□□□ 0.02
COL9A3-207ENST00000467819 NOXA1Q86UR1 476 aa15.19■□□□□ 0.02
COL9A3-207ENST00000467819 CLVS1Q8IUQ0 354 aaPredicted RBP15.19■□□□□ 0.02
COL9A3-207ENST00000467819 OR51G1Q8NGK1 321 aa15.19■□□□□ 0.02
COL9A3-207ENST00000467819 DIRAS2Q96HU8 199 aa15.19■□□□□ 0.02
COL9A3-207ENST00000467819 PRRT1Q99946 306 aa15.19■□□□□ 0.02
COL9A3-207ENST00000467819 BUB3O43684 328 aa15.18■□□□□ 0.02
COL9A3-207ENST00000467819 PSG1P11464 419 aa15.18■□□□□ 0.02
COL9A3-207ENST00000467819 NUTF2P61970 127 aaKnown RBP15.18■□□□□ 0.02
COL9A3-207ENST00000467819 C1QTNF4Q9BXJ3 329 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 126.3 ms