RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 SCCPDHQ8NBX0 429 aa12.5□□□□□ -0.41
SNED1-208ENST00000466618 ST6GALNAC6Q969X2 333 aa12.5□□□□□ -0.41
SNED1-208ENST00000466618 RAB1BQ9H0U4 201 aa12.5□□□□□ -0.41
SNED1-208ENST00000466618 GCM1Q9NP62 436 aa12.5□□□□□ -0.41
SNED1-208ENST00000466618 TRAPPC2LQ9UL33 140 aa12.5□□□□□ -0.41
SNED1-208ENST00000466618 MPDU1O75352 247 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 APCSP02743 223 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 LINC00869P0C866 280 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 BVES-AS1Q5T3Y7 98 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 FAM53AQ6NSI3 398 aaPredicted RBP12.49□□□□□ -0.41
SNED1-208ENST00000466618 KIR3DL3Q8N743 410 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 Q8TCH9 128 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 NEU4Q8WWR8 484 aaPredicted RBP12.49□□□□□ -0.41
SNED1-208ENST00000466618 PKIBQ9C010 78 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 SAP30LQ9HAJ7 183 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 OSTCQ9NRP0 149 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 TECRQ9NZ01 308 aaKnown RBP12.49□□□□□ -0.41
SNED1-208ENST00000466618 LOC102724200A0A096LPH7 203 aaPredicted RBP12.49□□□□□ -0.41
SNED1-208ENST00000466618 CIDEAO60543 219 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 FOXH1O75593 365 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 RHBDL1O75783 438 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 TNFRSF1AP19438 455 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 CFHR2P36980 270 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 UBE2G1P62253 170 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 PRR27Q6MZM9 219 aa12.49□□□□□ -0.41
SNED1-208ENST00000466618 MBNL3Q9NUK0 354 aaKnown RBP12.49□□□□□ -0.41
SNED1-208ENST00000466618 ARFGEF3Q5TH69 2177 aa12.48□□□□□ -0.41
SNED1-208ENST00000466618 ABCA12Q86UK0 2595 aa12.48□□□□□ -0.41
SNED1-208ENST00000466618 SMIM27A0A1W2PRY6 76 aa12.48□□□□□ -0.41
SNED1-208ENST00000466618 J3QT63 122 aa12.48□□□□□ -0.41
SNED1-208ENST00000466618 SSTR5P35346 364 aa12.48□□□□□ -0.41
SNED1-208ENST00000466618 GNG4P50150 75 aa12.48□□□□□ -0.41
SNED1-208ENST00000466618 PQLC2Q6ZP29 291 aa12.48□□□□□ -0.41
SNED1-208ENST00000466618 H2BFWTQ7Z2G1 175 aa12.48□□□□□ -0.41
SNED1-208ENST00000466618 C1orf159Q96HA4 380 aa12.48□□□□□ -0.41
SNED1-208ENST00000466618 WASHC3Q9Y3C0 194 aa12.48□□□□□ -0.41
SNED1-208ENST00000466618 PRSS46E5RG02 174 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 K7ERU9 68 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 M0R2Z0 102 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 NDUFS7O75251 213 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 RBMXL2O75526 392 aaKnown RBP12.47□□□□□ -0.41
SNED1-208ENST00000466618 AREGP15514 252 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 PDLIM3Q53GG5 364 aaPredicted RBP12.47□□□□□ -0.41
SNED1-208ENST00000466618 WDR82Q6UXN9 313 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 ZNF826PQ6ZT77 177 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 MOGAT3Q86VF5 341 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 ZBTB34Q8NCN2 500 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 SMIM12Q96EX1 92 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 RPH3ALQ9UNE2 315 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 MUC21A0A0G2JKD1 596 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 MUC21A0A140T8X8 626 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 TOX4O94842 621 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 NUDT3O95989 172 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 MUC21Q5SSG8 566 aa12.47□□□□□ -0.41
SNED1-208ENST00000466618 ASH1LQ9NR48 2969 aaKnown RBP12.46□□□□□ -0.41
SNED1-208ENST00000466618 GAGE12BA1L429 117 aa12.46□□□□□ -0.41
SNED1-208ENST00000466618 HSBP1L1C9JCN9 74 aa12.46□□□□□ -0.41
SNED1-208ENST00000466618 HSBP1O75506 76 aa12.46□□□□□ -0.41
SNED1-208ENST00000466618 OR2H2O95918 312 aa12.46□□□□□ -0.41
SNED1-208ENST00000466618 LHBP01229 141 aa12.46□□□□□ -0.41
SNED1-208ENST00000466618 USF1P22415 310 aaPredicted RBP12.46□□□□□ -0.41
SNED1-208ENST00000466618 EFNA4P52798 201 aa12.46□□□□□ -0.41
SNED1-208ENST00000466618 ERVK11-1P61568 191 aa12.46□□□□□ -0.41
SNED1-208ENST00000466618 MEGF9Q9H1U4 602 aa12.46□□□□□ -0.41
SNED1-208ENST00000466618 HELTA6NFD8 242 aa12.46□□□□□ -0.42
SNED1-208ENST00000466618 LY6HO94772 140 aa12.46□□□□□ -0.42
SNED1-208ENST00000466618 IGLV2-8P01709 118 aa12.46□□□□□ -0.42
SNED1-208ENST00000466618 PSG9Q00887 426 aa12.46□□□□□ -0.42
SNED1-208ENST00000466618 CATR1Q13166 79 aa12.46□□□□□ -0.42
SNED1-208ENST00000466618 FAM71F2Q6NXP2 309 aa12.46□□□□□ -0.42
SNED1-208ENST00000466618 SSMEM1Q8WWF3 244 aa12.46□□□□□ -0.42
SNED1-208ENST00000466618 TNFRSF19Q9NS68 423 aa12.46□□□□□ -0.42
SNED1-208ENST00000466618 POLDIP2Q9Y2S7 368 aa12.46□□□□□ -0.42
SNED1-208ENST00000466618 USF3Q68DE3 2245 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 SPG11Q96JI7 2443 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 IZUMO1RA6ND01 250 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 ISLRO14498 428 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 IGHV4-39P01824 125 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 NBEAP1P0C6P0 100 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 OR9G9P0C7N8 305 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 GATA2P23769 480 aaPredicted RBP12.45□□□□□ -0.42
SNED1-208ENST00000466618 CRYBB3P26998 211 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 RIPPLY3P57055 190 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 LINC00205P59089 165 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 KLF5Q13887 457 aaPredicted RBP12.45□□□□□ -0.42
SNED1-208ENST00000466618 GCSAMQ8N6F7 178 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 ST20Q9HBF5 79 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 J3QR06 171 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 SAP30O75446 220 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 NPY1RP25929 384 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 HOXA4Q00056 320 aaPredicted RBP12.45□□□□□ -0.42
SNED1-208ENST00000466618 FAM120AOSQ5T036 256 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 GDF5OSQ5U4N7 250 aa12.45□□□□□ -0.42
SNED1-208ENST00000466618 LSM4Q9Y4Z0 139 aaKnown RBP12.45□□□□□ -0.42
SNED1-208ENST00000466618 POLQO75417 2590 aa12.44□□□□□ -0.42
SNED1-208ENST00000466618 TRAV8-6A0A0B4J262 113 aa12.44□□□□□ -0.42
SNED1-208ENST00000466618 SRRM5B3KS81 715 aa12.44□□□□□ -0.42
SNED1-208ENST00000466618 LYNX1G3V0Z9 82 aa12.44□□□□□ -0.42
SNED1-208ENST00000466618 TMEM178BH3BS89 294 aa12.44□□□□□ -0.42
SNED1-208ENST00000466618 MT-CO2P00403 227 aa12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms