RNA–Protein interactions for RNA: ENST00000466541.1

SHROOM3-202, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 628 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-202ENST00000466541 STRAPQ9Y3F4 350 aaKnown RBP9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 LSM5Q9Y4Y9 91 aaKnown RBP9.1□□□□□ -0.95
SHROOM3-202ENST00000466541 TRAV14DV4A0A0A6YYC5 116 aa9.09□□□□□ -0.95
SHROOM3-202ENST00000466541 SIX6O95475 246 aa9.09□□□□□ -0.95
SHROOM3-202ENST00000466541 IL5P05113 134 aa9.09□□□□□ -0.95
SHROOM3-202ENST00000466541 ELLP55199 621 aaPredicted RBP9.09□□□□□ -0.95
SHROOM3-202ENST00000466541 S100A10P60903 97 aa9.09□□□□□ -0.95
SHROOM3-202ENST00000466541 DCTN2Q13561 401 aaKnown RBP9.09□□□□□ -0.95
SHROOM3-202ENST00000466541 OR8G2PQ6IF36 304 aa9.09□□□□□ -0.95
SHROOM3-202ENST00000466541 GSG1LQ6UXU4 331 aa9.09□□□□□ -0.95
SHROOM3-202ENST00000466541 RBPMS2Q6ZRY4 209 aaKnown RBP9.09□□□□□ -0.95
SHROOM3-202ENST00000466541 TMEM116Q8NCL8 245 aa9.09□□□□□ -0.95
SHROOM3-202ENST00000466541 MARC2Q969Z3 335 aa9.09□□□□□ -0.95
SHROOM3-202ENST00000466541 SLC35E1Q96K37 410 aa9.09□□□□□ -0.95
SHROOM3-202ENST00000466541 RCL1Q9Y2P8 373 aaKnown RBP9.09□□□□□ -0.95
SHROOM3-202ENST00000466541 PRKDCP78527 4128 aaKnown RBP9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 IGKV3-7A0A075B6H7 116 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 TRAV30A0A087WSZ9 112 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 ZFP92A6NM28 416 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 L7N2F9 121 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 GOSR2O14653 212 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 IGKV1-17P01599 117 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 MBPP02686 304 aaPredicted RBP9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 GPX4P36969 197 aaPredicted RBP9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 ATP5IP56385 69 aaPredicted RBP9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 VAMP2P63027 116 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 GAMTQ14353 236 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 GTSCR1Q86UQ5 136 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 TMEM61Q8N0U2 210 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 OR1S2Q8NGQ3 325 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 ZNF414Q96IQ9 312 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 C2orf50Q96LR7 162 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 ASCL2Q99929 193 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 GINS3Q9BRX5 216 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 SMPXQ9UHP9 88 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 SMAD5-AS1Q9Y6J3 95 aa9.08□□□□□ -0.96
SHROOM3-202ENST00000466541 COL7A1Q02388 2944 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 IGHV7-4-1A0A0J9YVY3 117 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 SMCO3A2RU48 225 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 ZNF785A8K8V0 405 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 K7EMT4 169 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 SSNA1O43805 119 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 APOHP02749 345 aaPredicted RBP9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 METTL15P1P0C7V9 234 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 IGLC1P0CG04 106 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 C8orf88P0DMB2 117 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 BCAP31P51572 246 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 CD81P60033 236 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 RRAS2P62070 204 aaPredicted RBP9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 RPL11P62913 178 aaKnown RBP9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 OR2F1Q13607 317 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 OR2K2Q8NGT1 345 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 Q8WTZ3 238 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 SMIM8Q96KF7 97 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 RHPN1-AS1Q9BWJ2 59 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 ZFAND3Q9H8U3 227 aa9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 LSM4Q9Y4Z0 139 aaKnown RBP9.07□□□□□ -0.96
SHROOM3-202ENST00000466541 K7EPK0 472 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 CHEK1O14757 476 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 PRAF2O60831 178 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 CCNKO75909 580 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 CD7P09564 240 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 RD3LP0DJH9 198 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 NPPCP23582 126 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 TFPI2P48307 235 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 PAX9P55771 341 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 AKR1C1Q04828 323 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 LAMTOR1Q6IAA8 161 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 GBGT1Q8N5D6 347 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 ST8SIA2Q92186 375 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 METTL26Q96S19 204 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 RAB40CQ96S21 281 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 RNF2Q99496 336 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 NEURL2Q9BR09 285 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 MARVELD1Q9BSK0 173 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 TUBA4BQ9H853 241 aa9.06□□□□□ -0.96
SHROOM3-202ENST00000466541 C7orf66A4D0T2 115 aa9.05□□□□□ -0.96
SHROOM3-202ENST00000466541 SNRPGP15A8MWD9 76 aa9.05□□□□□ -0.96
SHROOM3-202ENST00000466541 IL4P05112 153 aa9.05□□□□□ -0.96
SHROOM3-202ENST00000466541 CAV2P51636 162 aa9.05□□□□□ -0.96
SHROOM3-202ENST00000466541 ZNF90Q03938 601 aa9.05□□□□□ -0.96
SHROOM3-202ENST00000466541 ACOT7LQ6ZUV0 252 aa9.05□□□□□ -0.96
SHROOM3-202ENST00000466541 WFDC3Q8IUB2 231 aa9.05□□□□□ -0.96
SHROOM3-202ENST00000466541 Q8N1Y9 231 aa9.05□□□□□ -0.96
SHROOM3-202ENST00000466541 PBDC1Q9BVG4 233 aa9.05□□□□□ -0.96
SHROOM3-202ENST00000466541 WFDC10AQ9H1F0 79 aa9.05□□□□□ -0.96
SHROOM3-202ENST00000466541 DFFBO76075 338 aa9.04□□□□□ -0.96
SHROOM3-202ENST00000466541 FRMD6-AS1P0C7T7 363 aa9.04□□□□□ -0.96
SHROOM3-202ENST00000466541 IGHV4-30-4P0DP06 118 aa9.04□□□□□ -0.96
SHROOM3-202ENST00000466541 PSG1P11464 419 aa9.04□□□□□ -0.96
SHROOM3-202ENST00000466541 YPEL3P61236 119 aaPredicted RBP9.04□□□□□ -0.96
SHROOM3-202ENST00000466541 RAB32Q13637 225 aa9.04□□□□□ -0.96
SHROOM3-202ENST00000466541 LRRC37A5PQ49AS3 106 aa9.04□□□□□ -0.96
SHROOM3-202ENST00000466541 TCF24Q7RTU0 167 aa9.04□□□□□ -0.96
SHROOM3-202ENST00000466541 LILRB2Q8N423 598 aa9.04□□□□□ -0.96
SHROOM3-202ENST00000466541 DEFB125Q8N687 156 aa9.04□□□□□ -0.96
SHROOM3-202ENST00000466541 OR51G1Q8NGK1 321 aa9.04□□□□□ -0.96
SHROOM3-202ENST00000466541 NARS2Q96I59 477 aaKnown RBP9.04□□□□□ -0.96
SHROOM3-202ENST00000466541 UBQLN2Q9UHD9 624 aa9.04□□□□□ -0.96
SHROOM3-202ENST00000466541 IGKV1D-37A0A075B6S9 117 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms