RNA–Protein interactions for RNA: ENST00000466448.4

SRSF4-202, Transcript of serine and arginine rich splicing factor 4, humanhuman

APPRIS ALT2 TSL 3

Gene SRSF4, Length 1,264 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-202ENST00000466448 Q6ZRM9 215 aa13.53□□□□□ -0.24
SRSF4-202ENST00000466448 CLVS1Q8IUQ0 354 aaPredicted RBP13.53□□□□□ -0.24
SRSF4-202ENST00000466448 ARRDC1Q8N5I2 433 aa13.53□□□□□ -0.24
SRSF4-202ENST00000466448 POM121L12Q8N7R1 296 aa13.53□□□□□ -0.24
SRSF4-202ENST00000466448 RAB2BQ8WUD1 216 aa13.53□□□□□ -0.24
SRSF4-202ENST00000466448 RRNAD1Q96FB5 475 aaKnown RBP13.53□□□□□ -0.24
SRSF4-202ENST00000466448 CD3DP04234 171 aa13.52□□□□□ -0.25
SRSF4-202ENST00000466448 HNRNPCP07910 306 aaKnown RBP eCLIP13.52□□□□□ -0.25
SRSF4-202ENST00000466448 P0DMU3 169 aa13.52□□□□□ -0.25
SRSF4-202ENST00000466448 FAM231AP0DMU4 169 aa13.52□□□□□ -0.25
SRSF4-202ENST00000466448 FAM231CP0DMU5 169 aa13.52□□□□□ -0.25
SRSF4-202ENST00000466448 UCP1P25874 307 aa13.52□□□□□ -0.25
SRSF4-202ENST00000466448 TMBIM6P55061 237 aa13.52□□□□□ -0.25
SRSF4-202ENST00000466448 PRSS54Q6PEW0 395 aa13.52□□□□□ -0.25
SRSF4-202ENST00000466448 XCL2Q9UBD3 114 aa13.52□□□□□ -0.25
SRSF4-202ENST00000466448 RYR1P21817 5038 aa13.52□□□□□ -0.25
SRSF4-202ENST00000466448 RPS10-NUDT3A0A1W2PQS6 291 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 PRSS29PA6NIE9 313 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 FAM25AB3EWG3 89 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 FAM25CB3EWG5 89 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 FAM25GB3EWG6 89 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 FAM90A26D6RGX4 464 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 RTL8CO15255 209 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 NOL3O60936 208 aaKnown RBP13.51□□□□□ -0.25
SRSF4-202ENST00000466448 MED14OSP0DP75 135 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 RND2P52198 227 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 AP2S1P53680 142 aaPredicted RBP13.51□□□□□ -0.25
SRSF4-202ENST00000466448 SPCS3P61009 180 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 NUTF2P61970 127 aaKnown RBP13.51□□□□□ -0.25
SRSF4-202ENST00000466448 USF2Q15853 346 aaPredicted RBP13.51□□□□□ -0.25
SRSF4-202ENST00000466448 AARDQ4LEZ3 155 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 OR1S2Q8NGQ3 325 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 RNASE11Q8TAA1 199 aaKnown RBP13.51□□□□□ -0.25
SRSF4-202ENST00000466448 Q8WTZ3 238 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 NDUFAF3Q9BU61 184 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 C1QTNF4Q9BXJ3 329 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 COPZ2Q9P299 210 aa13.51□□□□□ -0.25
SRSF4-202ENST00000466448 M0R2N4 97 aa13.5□□□□□ -0.25
SRSF4-202ENST00000466448 OR10J1P30954 320 aa13.5□□□□□ -0.25
SRSF4-202ENST00000466448 HTR2BP41595 481 aa13.5□□□□□ -0.25
SRSF4-202ENST00000466448 YPEL3P61236 119 aaPredicted RBP13.5□□□□□ -0.25
SRSF4-202ENST00000466448 SNRPD3P62318 126 aaKnown RBP13.5□□□□□ -0.25
SRSF4-202ENST00000466448 DHODHQ02127 395 aa13.5□□□□□ -0.25
SRSF4-202ENST00000466448 OR4D10Q8NGI6 311 aa13.5□□□□□ -0.25
SRSF4-202ENST00000466448 OR13C8Q8NGS7 320 aa13.5□□□□□ -0.25
SRSF4-202ENST00000466448 AGRNO00468 2067 aa13.49□□□□□ -0.25
SRSF4-202ENST00000466448 H3BMM0 161 aa13.49□□□□□ -0.25
SRSF4-202ENST00000466448 IL4P05112 153 aa13.49□□□□□ -0.25
SRSF4-202ENST00000466448 TBPP20226 339 aa13.49□□□□□ -0.25
SRSF4-202ENST00000466448 CCDC71LQ8N9Z2 235 aa13.49□□□□□ -0.25
SRSF4-202ENST00000466448 OR52E5Q8NH55 327 aa13.49□□□□□ -0.25
SRSF4-202ENST00000466448 OR52I2Q8NH67 350 aa13.49□□□□□ -0.25
SRSF4-202ENST00000466448 TERB2Q8NHR7 220 aa13.49□□□□□ -0.25
SRSF4-202ENST00000466448 C15orf40Q8WUR7 153 aa13.49□□□□□ -0.25
SRSF4-202ENST00000466448 TMEM222Q9H0R3 208 aa13.49□□□□□ -0.25
SRSF4-202ENST00000466448 NRN1Q9NPD7 142 aa13.49□□□□□ -0.25
SRSF4-202ENST00000466448 HEYLQ9NQ87 328 aaPredicted RBP13.49□□□□□ -0.25
SRSF4-202ENST00000466448 SLC25A4P12235 298 aa13.48□□□□□ -0.25
SRSF4-202ENST00000466448 SPCS2Q15005 226 aa13.48□□□□□ -0.25
SRSF4-202ENST00000466448 C2orf83Q53S99 150 aa13.48□□□□□ -0.25
SRSF4-202ENST00000466448 FAM219AQ8IW50 185 aa13.48□□□□□ -0.25
SRSF4-202ENST00000466448 ZFAND1Q8TCF1 268 aa13.48□□□□□ -0.25
SRSF4-202ENST00000466448 MARCH1Q8TCQ1 289 aa13.48□□□□□ -0.25
SRSF4-202ENST00000466448 RNASEH2CQ8TDP1 164 aaKnown RBP13.48□□□□□ -0.25
SRSF4-202ENST00000466448 TMEM170AQ8WVE7 144 aa13.48□□□□□ -0.25
SRSF4-202ENST00000466448 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.48□□□□□ -0.25
SRSF4-202ENST00000466448 MTFP1Q9UDX5 166 aa13.48□□□□□ -0.25
SRSF4-202ENST00000466448 DNAH17Q9UFH2 4485 aa13.48□□□□□ -0.25
SRSF4-202ENST00000466448 BUB3O43684 328 aa13.47□□□□□ -0.25
SRSF4-202ENST00000466448 B3GALNT1O75752 331 aa13.47□□□□□ -0.25
SRSF4-202ENST00000466448 CDS2O95674 445 aa13.47□□□□□ -0.25
SRSF4-202ENST00000466448 NPY1RP25929 384 aa13.47□□□□□ -0.25
SRSF4-202ENST00000466448 SCGB2B2Q4G0G5 96 aa13.47□□□□□ -0.25
SRSF4-202ENST00000466448 SIGLEC15Q6ZMC9 328 aa13.47□□□□□ -0.25
SRSF4-202ENST00000466448 ZNF705AQ6ZN79 300 aaPredicted RBP13.47□□□□□ -0.25
SRSF4-202ENST00000466448 SLC24A4Q8NFF2 622 aa13.47□□□□□ -0.25
SRSF4-202ENST00000466448 LHFPL5Q8TAF8 219 aa13.47□□□□□ -0.25
SRSF4-202ENST00000466448 SEPSECSQ9HD40 501 aaKnown RBP13.47□□□□□ -0.25
SRSF4-202ENST00000466448 CD74P04233 296 aa13.46□□□□□ -0.25
SRSF4-202ENST00000466448 OR5AC1P0C628 307 aa13.46□□□□□ -0.25
SRSF4-202ENST00000466448 HLA-DRB4P13762 266 aa13.46□□□□□ -0.25
SRSF4-202ENST00000466448 EMP1P54849 157 aa13.46□□□□□ -0.25
SRSF4-202ENST00000466448 NPIPB3Q92617 1050 aa13.46□□□□□ -0.25
SRSF4-202ENST00000466448 ABHD1Q96SE0 405 aa13.46□□□□□ -0.25
SRSF4-202ENST00000466448 CCDC59Q9P031 241 aaKnown RBP13.46□□□□□ -0.25
SRSF4-202ENST00000466448 EXTL2Q9UBQ6 330 aa13.46□□□□□ -0.25
SRSF4-202ENST00000466448 CACNG5Q9UF02 275 aa13.46□□□□□ -0.25
SRSF4-202ENST00000466448 HLA-DRB4X5D2U9 266 aa13.46□□□□□ -0.25
SRSF4-202ENST00000466448 ZNF705FA8MVS1 300 aaPredicted RBP13.45□□□□□ -0.26
SRSF4-202ENST00000466448 RGS5O15539 181 aa13.45□□□□□ -0.26
SRSF4-202ENST00000466448 NXPH3O95157 252 aa13.45□□□□□ -0.26
SRSF4-202ENST00000466448 TOMM40O96008 361 aa13.45□□□□□ -0.26
SRSF4-202ENST00000466448 ZNF705DP0CH99 300 aaPredicted RBP13.45□□□□□ -0.26
SRSF4-202ENST00000466448 ZNF705BP0CI00 300 aaPredicted RBP13.45□□□□□ -0.26
SRSF4-202ENST00000466448 SPART-AS1P0CW21 52 aa13.45□□□□□ -0.26
SRSF4-202ENST00000466448 RD3LP0DJH9 198 aa13.45□□□□□ -0.26
SRSF4-202ENST00000466448 LGALS9BQ3B8N2 356 aa13.45□□□□□ -0.26
SRSF4-202ENST00000466448 GLYATL2Q8WU03 294 aa13.45□□□□□ -0.26
SRSF4-202ENST00000466448 RBPMSQ93062 196 aaKnown RBP13.45□□□□□ -0.26
SRSF4-202ENST00000466448 NEU1Q99519 415 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms