RNA–Protein interactions for RNA: ENST00000466285.1

COL6A1-203, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 3

Gene COL6A1, Length 500 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-203ENST00000466285 AARDQ4LEZ3 155 aa14.87□□□□□ -0.03
COL6A1-203ENST00000466285 PRSS54Q6PEW0 395 aa14.87□□□□□ -0.03
COL6A1-203ENST00000466285 GRAMD2BQ96HH9 432 aa14.87□□□□□ -0.03
COL6A1-203ENST00000466285 PDCD10Q9BUL8 212 aa14.87□□□□□ -0.03
COL6A1-203ENST00000466285 COPZ2Q9P299 210 aa14.87□□□□□ -0.03
COL6A1-203ENST00000466285 DNAH11Q96DT5 4516 aa14.87□□□□□ -0.03
COL6A1-203ENST00000466285 PKD1P98161 4303 aa14.87□□□□□ -0.03
COL6A1-203ENST00000466285 CORTO00230 105 aa14.86□□□□□ -0.03
COL6A1-203ENST00000466285 RORCP51449 518 aa14.86□□□□□ -0.03
COL6A1-203ENST00000466285 TMEM230Q96A57 120 aa14.86□□□□□ -0.03
COL6A1-203ENST00000466285 RTBDNQ9BSG5 229 aaPredicted RBP14.86□□□□□ -0.03
COL6A1-203ENST00000466285 HRH4Q9H3N8 390 aa14.86□□□□□ -0.03
COL6A1-203ENST00000466285 TMEM231Q9H6L2 316 aa14.86□□□□□ -0.03
COL6A1-203ENST00000466285 NDUFA13Q9P0J0 144 aa14.86□□□□□ -0.03
COL6A1-203ENST00000466285 A6NHS1 94 aa14.85□□□□□ -0.03
COL6A1-203ENST00000466285 PSMG4Q5JS54 123 aa14.85□□□□□ -0.03
COL6A1-203ENST00000466285 C16orf54Q6UWD8 224 aa14.85□□□□□ -0.03
COL6A1-203ENST00000466285 TERB2Q8NHR7 220 aa14.85□□□□□ -0.03
COL6A1-203ENST00000466285 RNASE11Q8TAA1 199 aaKnown RBP14.85□□□□□ -0.03
COL6A1-203ENST00000466285 GLYATL2Q8WU03 294 aa14.85□□□□□ -0.03
COL6A1-203ENST00000466285 GPR146Q96CH1 333 aa14.85□□□□□ -0.03
COL6A1-203ENST00000466285 TMEM222Q9H0R3 208 aa14.85□□□□□ -0.03
COL6A1-203ENST00000466285 CCDC59Q9P031 241 aaKnown RBP14.85□□□□□ -0.03
COL6A1-203ENST00000466285 CACNG5Q9UF02 275 aa14.85□□□□□ -0.03
COL6A1-203ENST00000466285 RSL24D1Q9UHA3 163 aaKnown RBP14.85□□□□□ -0.03
COL6A1-203ENST00000466285 IGHV4-4A0A075B6R2 117 aa14.84□□□□□ -0.03
COL6A1-203ENST00000466285 RAB3DO95716 219 aa14.84□□□□□ -0.03
COL6A1-203ENST00000466285 SPP1P10451 314 aa14.84□□□□□ -0.03
COL6A1-203ENST00000466285 SUB1P53999 127 aaKnown RBP eCLIP14.84□□□□□ -0.03
COL6A1-203ENST00000466285 DHODHQ02127 395 aa14.84□□□□□ -0.03
COL6A1-203ENST00000466285 DHRS2Q13268 280 aa14.84□□□□□ -0.03
COL6A1-203ENST00000466285 SELENOHQ8IZQ5 122 aaKnown RBP14.84□□□□□ -0.03
COL6A1-203ENST00000466285 CCDC71LQ8N9Z2 235 aa14.84□□□□□ -0.03
COL6A1-203ENST00000466285 TMEM229BQ8NBD8 167 aa14.84□□□□□ -0.03
COL6A1-203ENST00000466285 RRNAD1Q96FB5 475 aaKnown RBP14.84□□□□□ -0.03
COL6A1-203ENST00000466285 ENY2Q9NPA8 101 aa14.84□□□□□ -0.03
COL6A1-203ENST00000466285 A0A1W2PS18 150 aa14.83□□□□□ -0.04
COL6A1-203ENST00000466285 CDS2O95674 445 aa14.83□□□□□ -0.04
COL6A1-203ENST00000466285 MIFP14174 115 aa14.83□□□□□ -0.04
COL6A1-203ENST00000466285 TBPP20226 339 aa14.83□□□□□ -0.04
COL6A1-203ENST00000466285 STEAP1BQ6NZ63 245 aa14.83□□□□□ -0.04
COL6A1-203ENST00000466285 MORN3Q6PF18 240 aaPredicted RBP14.83□□□□□ -0.04
COL6A1-203ENST00000466285 RAB40CQ96S21 281 aa14.83□□□□□ -0.04
COL6A1-203ENST00000466285 NAA60Q9H7X0 242 aa14.83□□□□□ -0.04
COL6A1-203ENST00000466285 TBC1D24Q9ULP9 559 aa14.83□□□□□ -0.04
COL6A1-203ENST00000466285 FAM90A26D6RGX4 464 aa14.82□□□□□ -0.04
COL6A1-203ENST00000466285 NOL3O60936 208 aaKnown RBP14.82□□□□□ -0.04
COL6A1-203ENST00000466285 HNRNPCP07910 306 aaKnown RBP eCLIP14.82□□□□□ -0.04
COL6A1-203ENST00000466285 ZNF182P17025 639 aaPredicted RBP14.82□□□□□ -0.04
COL6A1-203ENST00000466285 OR10J1P30954 320 aa14.82□□□□□ -0.04
COL6A1-203ENST00000466285 SPCS3P61009 180 aa14.82□□□□□ -0.04
COL6A1-203ENST00000466285 C12orf74Q32Q52 190 aa14.82□□□□□ -0.04
COL6A1-203ENST00000466285 SLC24A4Q8NFF2 622 aa14.82□□□□□ -0.04
COL6A1-203ENST00000466285 SLIRPQ9GZT3 109 aaKnown RBP14.82□□□□□ -0.04
COL6A1-203ENST00000466285 HELTA6NFD8 242 aa14.81□□□□□ -0.04
COL6A1-203ENST00000466285 C11orf94C9JXX5 98 aa14.81□□□□□ -0.04
COL6A1-203ENST00000466285 IL4P05112 153 aa14.81□□□□□ -0.04
COL6A1-203ENST00000466285 TAS2R19P59542 299 aa14.81□□□□□ -0.04
COL6A1-203ENST00000466285 C2orf83Q53S99 150 aa14.81□□□□□ -0.04
COL6A1-203ENST00000466285 GDF5OSQ5U4N7 250 aa14.81□□□□□ -0.04
COL6A1-203ENST00000466285 MZT2AQ6P582 158 aa14.81□□□□□ -0.04
COL6A1-203ENST00000466285 OR4C16Q8NGL9 310 aa14.81□□□□□ -0.04
COL6A1-203ENST00000466285 OR1S2Q8NGQ3 325 aa14.81□□□□□ -0.04
COL6A1-203ENST00000466285 ZFAND1Q8TCF1 268 aa14.81□□□□□ -0.04
COL6A1-203ENST00000466285 HEYLQ9NQ87 328 aaPredicted RBP14.81□□□□□ -0.04
COL6A1-203ENST00000466285 TRAV10A0A0B4J240 114 aa14.8□□□□□ -0.04
COL6A1-203ENST00000466285 ATG12O94817 140 aa14.8□□□□□ -0.04
COL6A1-203ENST00000466285 HTR2BP41595 481 aa14.8□□□□□ -0.04
COL6A1-203ENST00000466285 TCTAP57738 103 aa14.8□□□□□ -0.04
COL6A1-203ENST00000466285 TMEM268Q5VZI3 342 aa14.8□□□□□ -0.04
COL6A1-203ENST00000466285 OR52E5Q8NH55 327 aa14.8□□□□□ -0.04
COL6A1-203ENST00000466285 NPIPB3Q92617 1050 aa14.8□□□□□ -0.04
COL6A1-203ENST00000466285 RBPMSQ93062 196 aaKnown RBP14.8□□□□□ -0.04
COL6A1-203ENST00000466285 ACY3Q96HD9 319 aa14.8□□□□□ -0.04
COL6A1-203ENST00000466285 XCL2Q9UBD3 114 aa14.8□□□□□ -0.04
COL6A1-203ENST00000466285 RYR1P21817 5038 aa14.8□□□□□ -0.04
COL6A1-203ENST00000466285 TEX13DA0A0J9YY54 714 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-203ENST00000466285 A0A1B0GVY2 172 aa14.79□□□□□ -0.04
COL6A1-203ENST00000466285 CRYM-AS1A6NIL9 109 aa14.79□□□□□ -0.04
COL6A1-203ENST00000466285 CTDSP2O14595 271 aa14.79□□□□□ -0.04
COL6A1-203ENST00000466285 CTNNBIP1Q9NSA3 81 aaPredicted RBP14.79□□□□□ -0.04
COL6A1-203ENST00000466285 CEBPZOSA8MTT3 80 aa14.78□□□□□ -0.04
COL6A1-203ENST00000466285 GABARAPH6UMI1 98 aa14.78□□□□□ -0.04
COL6A1-203ENST00000466285 AMBPP02760 352 aa14.78□□□□□ -0.04
COL6A1-203ENST00000466285 FXYD7P58549 80 aa14.78□□□□□ -0.04
COL6A1-203ENST00000466285 YPEL3P61236 119 aaPredicted RBP14.78□□□□□ -0.04
COL6A1-203ENST00000466285 TMEM41BQ5BJD5 291 aa14.78□□□□□ -0.04
COL6A1-203ENST00000466285 FAM219AQ8IW50 185 aa14.78□□□□□ -0.04
COL6A1-203ENST00000466285 AP3S1Q92572 193 aa14.78□□□□□ -0.04
COL6A1-203ENST00000466285 TRAV30A0A087WSZ9 112 aa14.77□□□□□ -0.05
COL6A1-203ENST00000466285 RPS10-NUDT3A0A1W2PQS6 291 aa14.77□□□□□ -0.05
COL6A1-203ENST00000466285 H3BMM0 161 aa14.77□□□□□ -0.05
COL6A1-203ENST00000466285 BUB3O43684 328 aa14.77□□□□□ -0.05
COL6A1-203ENST00000466285 NPY1RP25929 384 aa14.77□□□□□ -0.05
COL6A1-203ENST00000466285 NMSQ5H8A3 153 aa14.77□□□□□ -0.05
COL6A1-203ENST00000466285 OR51G1Q8NGK1 321 aa14.77□□□□□ -0.05
COL6A1-203ENST00000466285 RNASEH2CQ8TDP1 164 aaKnown RBP14.77□□□□□ -0.05
COL6A1-203ENST00000466285 Q8WTZ3 238 aa14.77□□□□□ -0.05
COL6A1-203ENST00000466285 SMIM4Q8WVI0 70 aa14.77□□□□□ -0.05
COL6A1-203ENST00000466285 NARS2Q96I59 477 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms