RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 OR5AC1P0C628 307 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 OR13C7P0DN81 318 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 CTRB1P17538 263 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 EGFEM1PQ0D2K5 195 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 C10orf91Q5T1B1 145 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 TMEM268Q5VZI3 342 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 CTRB2Q6GPI1 263 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 CLEC19AQ6UXS0 136 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 DPPA3Q6W0C5 159 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 CLRN3Q8NCR9 226 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 BPIFCQ8NFQ6 507 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 OR1S2Q8NGQ3 325 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 OR1L8Q8NGR8 309 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 OR4A16Q8NH70 328 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 PCNPQ8WW12 178 aaKnown RBP7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 TMED6Q8WW62 240 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 FANCD2OSQ96PS1 177 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 OR4C12Q96R67 309 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 ARV1Q9H2C2 271 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 TREM1Q9NP99 234 aa7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 LSM5Q9Y4Y9 91 aaKnown RBP7.47□□□□□ -1.21
RTFDC1-205ENST00000466260 MEGF8Q7Z7M0 2845 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 A0A1B0GU03 582 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 TSPAN4O14817 238 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 MED6O75586 246 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 DFFBO76075 338 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 CRYGCP07315 174 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 UCP1P25874 307 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 NKX2-1P43699 371 aaPredicted RBP7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 FLI1Q01543 452 aaPredicted RBP7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 WT1-ASQ06250 92 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 BTN1A1Q13410 526 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 FAM74A1Q5RGS3 127 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 SLC25A24Q6NUK1 477 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 ACSM6Q6P461 480 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 NECAP1Q8NC96 275 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 LSM10Q969L4 123 aaKnown RBP7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 EEF1AKMT3Q96AZ1 226 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 RRNAD1Q96FB5 475 aaKnown RBP7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 GINS3Q9BRX5 216 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 ELOVL1Q9BW60 279 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 PRR13Q9NZ81 148 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 FBXL17Q9UF56 701 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 PRNDQ9UKY0 176 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 ZNF256Q9Y2P7 627 aaPredicted RBP7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 SELENOKQ9Y6D0 94 aa7.46□□□□□ -1.22
RTFDC1-205ENST00000466260 IGLV11-55A0A075B6I3 123 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 A0A0G2JRQ6 117 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 LOC105371267A0A1B0GV96 52 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 BMPR1BO00238 502 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 PITX3O75364 302 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 NXPH3O95157 252 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 BRI3O95415 125 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 SCGB1D2O95969 90 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 IGKV1-5P01602 117 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 HBE1P02100 147 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 HIST1H1BP16401 226 aaKnown RBP7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 ATF4P18848 351 aaPredicted RBP7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 EDN2P20800 178 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 GPR183P32249 361 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 ARL3P36405 182 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 PXDC1Q5TGL8 231 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 ZNF429Q86V71 674 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 STX12Q86Y82 276 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 OR9G4Q8NGQ1 327 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 LYPD6BQ8NI32 183 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 GLYATL2Q8WU03 294 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 CCDC140Q96MF4 163 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 RAB40CQ96S21 281 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 NDUFA4L2Q9NRX3 87 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 UQCC1Q9NVA1 299 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 DMRT1Q9Y5R6 373 aa7.45□□□□□ -1.22
RTFDC1-205ENST00000466260 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 IGHV3-35A0A0C4DH35 117 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 FAM90A26D6RGX4 464 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 OR2C1O95371 312 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 IFNA17P01571 189 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 SPP1P10451 314 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 INSL3P51460 131 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 TAS2R30P59541 319 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 RPL7L1Q6DKI1 246 aaKnown RBP7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 FAM219AQ8IW50 185 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 OR2C3Q8N628 320 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 SLC35G3Q8N808 338 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 OR4D5Q8NGN0 318 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 MISP3Q96FF7 219 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 HIPK2Q9H2X6 1198 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 PLEKHA3Q9HB20 300 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 TMEM14BQ9NUH8 114 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 FKBP11Q9NYL4 201 aa7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 ZMAT5Q9UDW3 170 aaKnown RBP7.44□□□□□ -1.22
RTFDC1-205ENST00000466260 CYB5BO43169 146 aa7.43□□□□□ -1.22
RTFDC1-205ENST00000466260 GGCTO75223 188 aaKnown RBP7.43□□□□□ -1.22
RTFDC1-205ENST00000466260 CAMLGP49069 296 aa7.43□□□□□ -1.22
RTFDC1-205ENST00000466260 HOXA1P49639 335 aaPredicted RBP7.43□□□□□ -1.22
RTFDC1-205ENST00000466260 MFAP2P55001 183 aa7.43□□□□□ -1.22
RTFDC1-205ENST00000466260 KLF5Q13887 457 aaPredicted RBP7.43□□□□□ -1.22
RTFDC1-205ENST00000466260 BTNL8Q6UX41 500 aa7.43□□□□□ -1.22
RTFDC1-205ENST00000466260 LYZL2Q7Z4W2 148 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms