RNA–Protein interactions for RNA: ENST00000465525.6

PTPRU-206, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 2

Gene PTPRU, Length 1,650 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-206ENST00000465525 ZNF491Q8N8L2 437 aa13.33□□□□□ -0.28
PTPRU-206ENST00000465525 TMEM116Q8NCL8 245 aa13.33□□□□□ -0.28
PTPRU-206ENST00000465525 OR4X2Q8NGF9 303 aa13.33□□□□□ -0.28
PTPRU-206ENST00000465525 OR4X1Q8NH49 305 aa13.33□□□□□ -0.28
PTPRU-206ENST00000465525 SCGB1C1Q8TD33 95 aa13.33□□□□□ -0.28
PTPRU-206ENST00000465525 USMG5Q96IX5 58 aa13.33□□□□□ -0.28
PTPRU-206ENST00000465525 MGST2Q99735 147 aa13.33□□□□□ -0.28
PTPRU-206ENST00000465525 RSG1Q9BU20 258 aa13.33□□□□□ -0.28
PTPRU-206ENST00000465525 SH3BGRL3Q9H299 93 aa13.33□□□□□ -0.28
PTPRU-206ENST00000465525 IGKV1D-37A0A075B6S9 117 aa13.32□□□□□ -0.28
PTPRU-206ENST00000465525 PPP5D1E7EU14 171 aa13.32□□□□□ -0.28
PTPRU-206ENST00000465525 FNDC10F2Z333 226 aa13.32□□□□□ -0.28
PTPRU-206ENST00000465525 OR10J1P30954 320 aa13.32□□□□□ -0.28
PTPRU-206ENST00000465525 KRTAP10-3P60369 221 aa13.32□□□□□ -0.28
PTPRU-206ENST00000465525 TIGITQ495A1 244 aa13.32□□□□□ -0.28
PTPRU-206ENST00000465525 TEPPQ6URK8 271 aa13.32□□□□□ -0.28
PTPRU-206ENST00000465525 RNF152Q8N8N0 203 aa13.32□□□□□ -0.28
PTPRU-206ENST00000465525 A0A0G2JLM5 398 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 A0A1W2PRX2 142 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 CLN5O75503 358 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 JTBO76095 146 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 IFNA7P01567 189 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 CLEC3BP05452 202 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 NPBWR1P48145 328 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 ZNF90Q03938 601 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 TEX261Q6UWH6 196 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 SLC7A5P1Q8MH63 180 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 MYOZ3Q8TDC0 251 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 CHRDL1Q9BU40 450 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 LSM4Q9Y4Z0 139 aaKnown RBP13.31□□□□□ -0.28
PTPRU-206ENST00000465525 TRBV7-1A0A0A6YYK4 115 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 IGHV3-35A0A0C4DH35 117 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 TCRBV4S1A1TA0A5B7 111 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 AGPAT2O15120 278 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 IGLC1P0CG04 106 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 GATA2P23769 480 aaPredicted RBP13.31□□□□□ -0.28
PTPRU-206ENST00000465525 ATP6V0CP27449 155 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 TMEM182Q6ZP80 229 aaPredicted RBP13.31□□□□□ -0.28
PTPRU-206ENST00000465525 SLC51BQ86UW2 128 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 THAP8Q8NA92 274 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 CITED2Q99967 270 aaPredicted RBP13.31□□□□□ -0.28
PTPRU-206ENST00000465525 NPCDR1Q9BY65 106 aa13.31□□□□□ -0.28
PTPRU-206ENST00000465525 CAMLGP49069 296 aa13.3□□□□□ -0.28
PTPRU-206ENST00000465525 ZNF343Q6P1L6 599 aa13.3□□□□□ -0.28
PTPRU-206ENST00000465525 WFDC12Q8WWY7 111 aa13.3□□□□□ -0.28
PTPRU-206ENST00000465525 ST8SIA2Q92186 375 aa13.3□□□□□ -0.28
PTPRU-206ENST00000465525 GGTLC1Q9BX51 225 aa13.3□□□□□ -0.28
PTPRU-206ENST00000465525 CFDP00746 253 aaPredicted RBP13.29□□□□□ -0.28
PTPRU-206ENST00000465525 IGKV1-17P01599 117 aa13.29□□□□□ -0.28
PTPRU-206ENST00000465525 CTSGP08311 255 aa13.29□□□□□ -0.28
PTPRU-206ENST00000465525 TPT1P13693 172 aaKnown RBP13.29□□□□□ -0.28
PTPRU-206ENST00000465525 ADMP35318 185 aa13.29□□□□□ -0.28
PTPRU-206ENST00000465525 MIC13Q5XKP0 118 aa13.29□□□□□ -0.28
PTPRU-206ENST00000465525 ZNF680Q8NEM1 530 aa13.29□□□□□ -0.28
PTPRU-206ENST00000465525 GINS3Q9BRX5 216 aa13.29□□□□□ -0.28
PTPRU-206ENST00000465525 ARV1Q9H2C2 271 aa13.29□□□□□ -0.28
PTPRU-206ENST00000465525 SLC25A32Q9H2D1 315 aa13.29□□□□□ -0.28
PTPRU-206ENST00000465525 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP13.28□□□□□ -0.28
PTPRU-206ENST00000465525 ARL3P36405 182 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 DEFB136Q30KP8 78 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 CYP2G1PQ6ZSU1 146 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 BAP18Q8IXM2 172 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 STOML3Q8TAV4 291 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 UBE2E2Q96LR5 201 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 TXN2Q99757 166 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 PARD6GQ9BYG4 376 aaPredicted RBP13.28□□□□□ -0.28
PTPRU-206ENST00000465525 TGOLN2O43493 480 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 LGALS1P09382 135 aaKnown RBP13.28□□□□□ -0.28
PTPRU-206ENST00000465525 FCGR2BP31994 310 aaPredicted RBP13.28□□□□□ -0.28
PTPRU-206ENST00000465525 ELLP55199 621 aaPredicted RBP13.28□□□□□ -0.28
PTPRU-206ENST00000465525 C12orf54Q6X4T0 127 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 ZNF709Q8N972 641 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 KLHL30-AS1Q8NEE0 82 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 BPIFCQ8NFQ6 507 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 TMED6Q8WW62 240 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 TRGV9Q99603 122 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 UBQLN2Q9UHD9 624 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 SLC45A2Q9UMX9 530 aa13.28□□□□□ -0.28
PTPRU-206ENST00000465525 COL6A5A8TX70 2615 aa13.27□□□□□ -0.28
PTPRU-206ENST00000465525 IGHV3OR16-8A0A075B7F1 116 aa13.27□□□□□ -0.29
PTPRU-206ENST00000465525 NUDT19A8MXV4 375 aa13.27□□□□□ -0.29
PTPRU-206ENST00000465525 NUPL2O15504 423 aaKnown RBP13.27□□□□□ -0.29
PTPRU-206ENST00000465525 MPDU1O75352 247 aa13.27□□□□□ -0.29
PTPRU-206ENST00000465525 RAB31Q13636 194 aa13.27□□□□□ -0.29
PTPRU-206ENST00000465525 DUX3Q96PT4 197 aa13.27□□□□□ -0.29
PTPRU-206ENST00000465525 BMPR1BO00238 502 aa13.26□□□□□ -0.29
PTPRU-206ENST00000465525 ALKAL2Q6UX46 152 aa13.26□□□□□ -0.29
PTPRU-206ENST00000465525 STPG3Q8N7X2 389 aa13.26□□□□□ -0.29
PTPRU-206ENST00000465525 OR2G3Q8NGZ4 309 aa13.26□□□□□ -0.29
PTPRU-206ENST00000465525 ZNF414Q96IQ9 312 aa13.26□□□□□ -0.29
PTPRU-206ENST00000465525 ZNF747Q9BV97 191 aa13.26□□□□□ -0.29
PTPRU-206ENST00000465525 PLA2G2EQ9NZK7 142 aa13.26□□□□□ -0.29
PTPRU-206ENST00000465525 PEF1Q9UBV8 284 aaKnown RBP13.26□□□□□ -0.29
PTPRU-206ENST00000465525 PXMP4Q9Y6I8 212 aa13.26□□□□□ -0.29
PTPRU-206ENST00000465525 TENM1Q9UKZ4 2725 aa13.26□□□□□ -0.29
PTPRU-206ENST00000465525 TRAV30A0A087WSZ9 112 aa13.25□□□□□ -0.29
PTPRU-206ENST00000465525 C17orf112F2Z3M2 114 aa13.25□□□□□ -0.29
PTPRU-206ENST00000465525 OR2C1O95371 312 aa13.25□□□□□ -0.29
PTPRU-206ENST00000465525 LINC00869P0C866 280 aa13.25□□□□□ -0.29
PTPRU-206ENST00000465525 PSG1P11464 419 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms