RNA–Protein interactions for RNA: ENST00000465514.1

USP39-212, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-212ENST00000465514 VBP1P61758 197 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 NCS1P62166 190 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 TRIM16LQ309B1 348 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 SP6Q3SY56 376 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 TIGITQ495A1 244 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 TMEM41BQ5BJD5 291 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 RNASE10Q5GAN6 216 aaKnown RBP7.01□□□□□ -1.29
USP39-212ENST00000465514 ACTL10Q5JWF8 245 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 LHFPL1Q86WI0 220 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 OR4X1Q8NH49 305 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 DCANP1Q8TF63 244 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 GRAMD2BQ96HH9 432 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 ENY2Q9NPA8 101 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 KLK11Q9UBX7 282 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 X6R8D5 127 aa7.01□□□□□ -1.29
USP39-212ENST00000465514 TRAV30A0A087WSZ9 112 aa7□□□□□ -1.29
USP39-212ENST00000465514 ELOA3CA0A087WX78 387 aaPredicted RBP7□□□□□ -1.29
USP39-212ENST00000465514 TRAV10A0A0B4J240 114 aa7□□□□□ -1.29
USP39-212ENST00000465514 A0A0G2JRQ6 117 aa7□□□□□ -1.29
USP39-212ENST00000465514 FAM25AB3EWG3 89 aa7□□□□□ -1.29
USP39-212ENST00000465514 FAM25CB3EWG5 89 aa7□□□□□ -1.29
USP39-212ENST00000465514 FAM25GB3EWG6 89 aa7□□□□□ -1.29
USP39-212ENST00000465514 SCGB2A1O75556 95 aa7□□□□□ -1.29
USP39-212ENST00000465514 CD3DP04234 171 aa7□□□□□ -1.29
USP39-212ENST00000465514 TNP2Q05952 138 aa7□□□□□ -1.29
USP39-212ENST00000465514 BSXQ3C1V8 233 aa7□□□□□ -1.29
USP39-212ENST00000465514 C1orf134Q5TEV5 83 aa7□□□□□ -1.29
USP39-212ENST00000465514 Q6ZRM9 215 aa7□□□□□ -1.29
USP39-212ENST00000465514 Q6ZTC4 211 aa7□□□□□ -1.29
USP39-212ENST00000465514 ARRDC1Q8N5I2 433 aa7□□□□□ -1.29
USP39-212ENST00000465514 CSNK1G2-AS1Q8NCQ2 148 aa7□□□□□ -1.29
USP39-212ENST00000465514 OR52I2Q8NH67 350 aa7□□□□□ -1.29
USP39-212ENST00000465514 RNASE11Q8TAA1 199 aaKnown RBP7□□□□□ -1.29
USP39-212ENST00000465514 ZFAND1Q8TCF1 268 aa7□□□□□ -1.29
USP39-212ENST00000465514 RRNAD1Q96FB5 475 aaKnown RBP7□□□□□ -1.29
USP39-212ENST00000465514 NARS2Q96I59 477 aaKnown RBP7□□□□□ -1.29
USP39-212ENST00000465514 RAB40CQ96S21 281 aa7□□□□□ -1.29
USP39-212ENST00000465514 RNF126Q9BV68 326 aa7□□□□□ -1.29
USP39-212ENST00000465514 FUNDC2Q9BWH2 189 aa7□□□□□ -1.29
USP39-212ENST00000465514 CLEC5AQ9NY25 188 aa7□□□□□ -1.29
USP39-212ENST00000465514 COPZ2Q9P299 210 aa7□□□□□ -1.29
USP39-212ENST00000465514 TBC1D24Q9ULP9 559 aa7□□□□□ -1.29
USP39-212ENST00000465514 AMBPP02760 352 aa6.99□□□□□ -1.29
USP39-212ENST00000465514 UCP1P25874 307 aa6.99□□□□□ -1.29
USP39-212ENST00000465514 RORCP51449 518 aa6.99□□□□□ -1.29
USP39-212ENST00000465514 SPCS3P61009 180 aa6.99□□□□□ -1.29
USP39-212ENST00000465514 DHRS2Q13268 280 aa6.99□□□□□ -1.29
USP39-212ENST00000465514 MZT2AQ6P582 158 aa6.99□□□□□ -1.29
USP39-212ENST00000465514 CENPSQ8N2Z9 138 aa6.99□□□□□ -1.29
USP39-212ENST00000465514 CCDC71LQ8N9Z2 235 aa6.99□□□□□ -1.29
USP39-212ENST00000465514 OR4D10Q8NGI6 311 aa6.99□□□□□ -1.29
USP39-212ENST00000465514 OR13C8Q8NGS7 320 aa6.99□□□□□ -1.29
USP39-212ENST00000465514 TERB2Q8NHR7 220 aa6.99□□□□□ -1.29
USP39-212ENST00000465514 C18orf15Q96N68 181 aa6.99□□□□□ -1.29
USP39-212ENST00000465514 MTFP1Q9UDX5 166 aa6.99□□□□□ -1.29
USP39-212ENST00000465514 U3KQE9 123 aa6.99□□□□□ -1.29
USP39-212ENST00000465514 VPS13BQ7Z7G8 4022 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 RPS10-NUDT3A0A1W2PQS6 291 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 HELTA6NFD8 242 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 TNFAIP8O95379 198 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 HNRNPCP07910 306 aaKnown RBP eCLIP6.98□□□□□ -1.29
USP39-212ENST00000465514 IGLC1P0CG04 106 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 TBPP20226 339 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 HTR2BP41595 481 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 EIF2B2P49770 351 aaKnown RBP6.98□□□□□ -1.29
USP39-212ENST00000465514 RND2P52198 227 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 SCGB2B2Q4G0G5 96 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 AARDQ4LEZ3 155 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 PSMG4Q5JS54 123 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 PRSS54Q6PEW0 395 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 C16orf54Q6UWD8 224 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 ZNF767PQ75MW2 155 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 OR1S2Q8NGQ3 325 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 MARCH1Q8TCQ1 289 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 Q8WTZ3 238 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 GLMPQ8WWB7 406 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 ABHD1Q96SE0 405 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 HEYLQ9NQ87 328 aaPredicted RBP6.98□□□□□ -1.29
USP39-212ENST00000465514 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.98□□□□□ -1.29
USP39-212ENST00000465514 CELA1Q9UNI1 258 aa6.98□□□□□ -1.29
USP39-212ENST00000465514 DEFB131BA0A096LNP1 70 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 B3GALNT1O75752 331 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 CDS2O95674 445 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 RAB3DO95716 219 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 IFNA10P01566 189 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 CD74P04233 296 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 OR10J1P30954 320 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 AP2S1P53680 142 aaPredicted RBP6.97□□□□□ -1.29
USP39-212ENST00000465514 YPEL3P61236 119 aaPredicted RBP6.97□□□□□ -1.29
USP39-212ENST00000465514 DHODHQ02127 395 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 C12orf74Q32Q52 190 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 C2orf83Q53S99 150 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 FAM219AQ8IW50 185 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 TMEM229BQ8NBD8 167 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 OR52E5Q8NH55 327 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 TMEM222Q9H0R3 208 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 EXTL2Q9UBQ6 330 aa6.97□□□□□ -1.29
USP39-212ENST00000465514 TEX13DA0A0J9YY54 714 aaPredicted RBP6.96□□□□□ -1.3
USP39-212ENST00000465514 FAM90A26D6RGX4 464 aa6.96□□□□□ -1.3
USP39-212ENST00000465514 IL4P05112 153 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms