RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 GPR146Q96CH1 333 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 DIRAS2Q96HU8 199 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 CCDC59Q9P031 241 aaKnown RBP10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 CACNG5Q9UF02 275 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 RABAC1Q9UI14 185 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 U3KQE9 123 aa10.51□□□□□ -0.73
SNRNP40-203ENST00000463988 ANKRD20A5PA0PJZ0 165 aa10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 GSTZ1O43708 216 aaPredicted RBP10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 IGLC1P0CG04 106 aa10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 EIF2B2P49770 351 aaKnown RBP10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 IL18Q14116 193 aa10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 LEMD1Q68G75 181 aa10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 ETFRF1Q6IPR1 90 aa10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 STHQ8IWL8 128 aa10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 SLC24A4Q8NFF2 622 aa10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 OR51S1Q8NGJ8 323 aa10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 C11orf45Q8TAV5 145 aa10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 DYNC2LI1Q8TCX1 351 aa10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 Q8WTZ3 238 aa10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 SCGB3A2Q96PL1 93 aa10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 KCNIP3Q9Y2W7 256 aa10.5□□□□□ -0.73
SNRNP40-203ENST00000463988 HELTA6NFD8 242 aa10.49□□□□□ -0.73
SNRNP40-203ENST00000463988 CEBPZOSA8MTT3 80 aa10.49□□□□□ -0.73
SNRNP40-203ENST00000463988 RND2P52198 227 aa10.49□□□□□ -0.73
SNRNP40-203ENST00000463988 TMBIM6P55061 237 aa10.49□□□□□ -0.73
SNRNP40-203ENST00000463988 NMSQ5H8A3 153 aa10.49□□□□□ -0.73
SNRNP40-203ENST00000463988 MORN3Q6PF18 240 aaPredicted RBP10.49□□□□□ -0.73
SNRNP40-203ENST00000463988 CLVS1Q8IUQ0 354 aaPredicted RBP10.49□□□□□ -0.73
SNRNP40-203ENST00000463988 STXBP6Q8NFX7 210 aa10.49□□□□□ -0.73
SNRNP40-203ENST00000463988 DCANP1Q8TF63 244 aa10.49□□□□□ -0.73
SNRNP40-203ENST00000463988 RSL24D1Q9UHA3 163 aaKnown RBP10.49□□□□□ -0.73
SNRNP40-203ENST00000463988 SCP2D1Q9UJQ7 156 aa10.49□□□□□ -0.73
SNRNP40-203ENST00000463988 SULT1A3P0DMM9 295 aa10.48□□□□□ -0.73
SNRNP40-203ENST00000463988 SULT1A4P0DMN0 295 aa10.48□□□□□ -0.73
SNRNP40-203ENST00000463988 SPP1P10451 314 aa10.48□□□□□ -0.73
SNRNP40-203ENST00000463988 OR10J1P30954 320 aa10.48□□□□□ -0.73
SNRNP40-203ENST00000463988 AP2S1P53680 142 aaPredicted RBP10.48□□□□□ -0.73
SNRNP40-203ENST00000463988 RBMS2Q15434 407 aaKnown RBP10.48□□□□□ -0.73
SNRNP40-203ENST00000463988 LGALS9CQ6DKI2 356 aa10.48□□□□□ -0.73
SNRNP40-203ENST00000463988 TRPT1Q86TN4 253 aaKnown RBP10.48□□□□□ -0.73
SNRNP40-203ENST00000463988 TMEM170AQ8WVE7 144 aa10.48□□□□□ -0.73
SNRNP40-203ENST00000463988 IFNA4P05014 189 aa10.47□□□□□ -0.73
SNRNP40-203ENST00000463988 HNRNPCP07910 306 aaKnown RBP eCLIP10.47□□□□□ -0.73
SNRNP40-203ENST00000463988 GIG44P09565 113 aaPredicted RBP10.47□□□□□ -0.73
SNRNP40-203ENST00000463988 NPY1RP25929 384 aa10.47□□□□□ -0.73
SNRNP40-203ENST00000463988 NANOS2P60321 138 aaKnown RBP10.47□□□□□ -0.73
SNRNP40-203ENST00000463988 C16orf54Q6UWD8 224 aa10.47□□□□□ -0.73
SNRNP40-203ENST00000463988 GLMPQ8WWB7 406 aa10.47□□□□□ -0.73
SNRNP40-203ENST00000463988 SOSTQ9BQB4 213 aa10.47□□□□□ -0.73
SNRNP40-203ENST00000463988 HRH4Q9H3N8 390 aa10.47□□□□□ -0.73
SNRNP40-203ENST00000463988 SEPSECSQ9HD40 501 aaKnown RBP10.47□□□□□ -0.73
SNRNP40-203ENST00000463988 U3KQ87 197 aa10.47□□□□□ -0.73
SNRNP40-203ENST00000463988 AGRNO00468 2067 aa10.46□□□□□ -0.73
SNRNP40-203ENST00000463988 A0A0B4J2A0 478 aa10.46□□□□□ -0.73
SNRNP40-203ENST00000463988 PIGBOS1A0A0B4J2F0 54 aa10.46□□□□□ -0.73
SNRNP40-203ENST00000463988 ZNF688P0C7X2 276 aa10.46□□□□□ -0.73
SNRNP40-203ENST00000463988 CCR6P51684 374 aa10.46□□□□□ -0.73
SNRNP40-203ENST00000463988 ATP5IP56385 69 aaPredicted RBP10.46□□□□□ -0.73
SNRNP40-203ENST00000463988 TCTAP57738 103 aa10.46□□□□□ -0.73
SNRNP40-203ENST00000463988 SRPXP78539 464 aa10.46□□□□□ -0.73
SNRNP40-203ENST00000463988 DHRS2Q13268 280 aa10.46□□□□□ -0.73
SNRNP40-203ENST00000463988 Q8NAQ8 132 aa10.46□□□□□ -0.73
SNRNP40-203ENST00000463988 NPIPB3Q92617 1050 aa10.46□□□□□ -0.73
SNRNP40-203ENST00000463988 HSPB7Q9UBY9 170 aa10.46□□□□□ -0.73
SNRNP40-203ENST00000463988 SHPKQ9UHJ6 478 aa10.46□□□□□ -0.73
SNRNP40-203ENST00000463988 TOMM40O96008 361 aa10.45□□□□□ -0.74
SNRNP40-203ENST00000463988 IFNA10P01566 189 aa10.45□□□□□ -0.74
SNRNP40-203ENST00000463988 IL4P05112 153 aa10.45□□□□□ -0.74
SNRNP40-203ENST00000463988 RD3LP0DJH9 198 aa10.45□□□□□ -0.74
SNRNP40-203ENST00000463988 ANXA3P12429 323 aa10.45□□□□□ -0.74
SNRNP40-203ENST00000463988 MIFP14174 115 aa10.45□□□□□ -0.74
SNRNP40-203ENST00000463988 SUPT4H1P63272 117 aaKnown RBP10.45□□□□□ -0.74
SNRNP40-203ENST00000463988 SMCO1Q147U7 214 aa10.45□□□□□ -0.74
SNRNP40-203ENST00000463988 USF2Q15853 346 aaPredicted RBP10.45□□□□□ -0.74
SNRNP40-203ENST00000463988 SLIRPQ9GZT3 109 aaKnown RBP10.45□□□□□ -0.74
SNRNP40-203ENST00000463988 FBXL17Q9UF56 701 aa10.45□□□□□ -0.74
SNRNP40-203ENST00000463988 KMT2AQ03164 3969 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 FABP12A6NFH5 140 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 KNCNA6PVL3 124 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 ZNF705EA8MWA4 302 aaPredicted RBP10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 C11orf94C9JXX5 98 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 BUB3O43684 328 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 NXPH3O95157 252 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 TNFSF8P32971 234 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 ACTL10Q5JWF8 245 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 LGI3Q8N145 548 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 DTD1Q8TEA8 209 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 C2CD4CQ8TF44 421 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 ACY3Q96HD9 319 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 RAB40CQ96S21 281 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 NRN1Q9NPD7 142 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 MCUBQ9NWR8 336 aa10.44□□□□□ -0.74
SNRNP40-203ENST00000463988 H3BMQ9 156 aa10.43□□□□□ -0.74
SNRNP40-203ENST00000463988 DEFB4AO15263 64 aa10.43□□□□□ -0.74
SNRNP40-203ENST00000463988 NOL3O60936 208 aaKnown RBP10.43□□□□□ -0.74
SNRNP40-203ENST00000463988 AKR1C4P17516 323 aa10.43□□□□□ -0.74
SNRNP40-203ENST00000463988 GPX4P36969 197 aaPredicted RBP10.43□□□□□ -0.74
SNRNP40-203ENST00000463988 NUP62P37198 522 aaPredicted RBP10.43□□□□□ -0.74
SNRNP40-203ENST00000463988 SNRPD3P62318 126 aaKnown RBP10.43□□□□□ -0.74
SNRNP40-203ENST00000463988 KLF9Q13886 244 aaPredicted RBP10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms