RNA–Protein interactions for RNA: ENST00000463370.5

VAPB-203, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 2,393 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-203ENST00000463370 PIMREGQ9BSJ6 248 aa10.15□□□□□ -0.79
VAPB-203ENST00000463370 ABCA1O95477 2261 aa10.15□□□□□ -0.79
VAPB-203ENST00000463370 CENPVL3A0A0U1RRI6 287 aa10.14□□□□□ -0.79
VAPB-203ENST00000463370 VWC2LB2RUY7 222 aa10.14□□□□□ -0.79
VAPB-203ENST00000463370 COX7A2P2O60397 106 aa10.14□□□□□ -0.79
VAPB-203ENST00000463370 CLN5O75503 358 aa10.14□□□□□ -0.79
VAPB-203ENST00000463370 EBI3Q14213 229 aa10.14□□□□□ -0.79
VAPB-203ENST00000463370 ETFRF1Q6IPR1 90 aa10.14□□□□□ -0.79
VAPB-203ENST00000463370 ZNF355PQ9NSJ1 428 aa10.14□□□□□ -0.79
VAPB-203ENST00000463370 POLQO75417 2590 aa10.14□□□□□ -0.79
VAPB-203ENST00000463370 OOSP1A8MZH6 123 aa10.14□□□□□ -0.79
VAPB-203ENST00000463370 NDUFS6O75380 124 aaKnown RBP10.14□□□□□ -0.79
VAPB-203ENST00000463370 C8orf88P0DMB2 117 aa10.14□□□□□ -0.79
VAPB-203ENST00000463370 PYYP10082 97 aa10.14□□□□□ -0.79
VAPB-203ENST00000463370 TMEM11P17152 192 aa10.14□□□□□ -0.79
VAPB-203ENST00000463370 ORM2P19652 201 aa10.14□□□□□ -0.79
VAPB-203ENST00000463370 FLI1Q01543 452 aaPredicted RBP10.14□□□□□ -0.79
VAPB-203ENST00000463370 TBL2Q9Y4P3 447 aaKnown RBP10.14□□□□□ -0.79
VAPB-203ENST00000463370 S4R3C0 116 aa10.14□□□□□ -0.79
VAPB-203ENST00000463370 NBPF19A0A087WUL8 3843 aa10.13□□□□□ -0.79
VAPB-203ENST00000463370 K7EIM0 57 aa10.13□□□□□ -0.79
VAPB-203ENST00000463370 GOSR1O95249 250 aa10.13□□□□□ -0.79
VAPB-203ENST00000463370 SMUG1Q53HV7 270 aa10.13□□□□□ -0.79
VAPB-203ENST00000463370 C10orf113Q5VZT2 155 aa10.13□□□□□ -0.79
VAPB-203ENST00000463370 C16orf82Q7Z2V1 217 aa10.13□□□□□ -0.79
VAPB-203ENST00000463370 OR5AU1Q8NGC0 362 aa10.13□□□□□ -0.79
VAPB-203ENST00000463370 MALSU1Q96EH3 234 aa10.13□□□□□ -0.79
VAPB-203ENST00000463370 C19orf24Q9BVV8 132 aa10.13□□□□□ -0.79
VAPB-203ENST00000463370 GGTLC3B5MD39 225 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 F6UZH7 168 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 PAX8Q06710 450 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 ZNF562Q6V9R5 426 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 LINC01551Q86U37 167 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 OR1B1Q8NGR6 318 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 TRGV9Q99603 122 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 POLR3KQ9Y2Y1 108 aaPredicted RBP10.12□□□□□ -0.79
VAPB-203ENST00000463370 CXorf65A6NEN9 183 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 CORTO00230 105 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 NPFFO15130 113 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 IGLC1P0CG04 106 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 HNF1AP20823 631 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 SELENOTP62341 195 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 CLEC2AQ6UVW9 174 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 PQLC2Q6ZP29 291 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 LINC00305Q7Z4B0 112 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 Q8N9W7 124 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 NECAP1Q8NC96 275 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 ARPC1AQ92747 370 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 SRSF8Q9BRL6 282 aaKnown RBP10.12□□□□□ -0.79
VAPB-203ENST00000463370 ELOVL1Q9BW60 279 aa10.12□□□□□ -0.79
VAPB-203ENST00000463370 MRPL32Q9BYC8 188 aaKnown RBP10.12□□□□□ -0.79
VAPB-203ENST00000463370 CLDN34H7C241 214 aa10.11□□□□□ -0.79
VAPB-203ENST00000463370 EGR2P11161 476 aaPredicted RBP10.11□□□□□ -0.79
VAPB-203ENST00000463370 TAS2R45P59539 299 aa10.11□□□□□ -0.79
VAPB-203ENST00000463370 HSPB9Q9BQS6 159 aa10.11□□□□□ -0.79
VAPB-203ENST00000463370 TMEM167BQ9NRX6 74 aa10.11□□□□□ -0.79
VAPB-203ENST00000463370 TMEM242Q9NWH2 141 aa10.11□□□□□ -0.79
VAPB-203ENST00000463370 SOX21Q9Y651 276 aaPredicted RBP10.11□□□□□ -0.79
VAPB-203ENST00000463370 IGHV7-81A0A0B4J1V7 117 aa10.11□□□□□ -0.79
VAPB-203ENST00000463370 SH2D7A6NKC9 451 aaPredicted RBP10.11□□□□□ -0.79
VAPB-203ENST00000463370 UBE2L3P68036 154 aaKnown RBP10.11□□□□□ -0.79
VAPB-203ENST00000463370 TIGITQ495A1 244 aa10.11□□□□□ -0.79
VAPB-203ENST00000463370 LEMD1Q68G75 181 aa10.11□□□□□ -0.79
VAPB-203ENST00000463370 BRD3OSQ6XYD6 125 aa10.11□□□□□ -0.79
VAPB-203ENST00000463370 OR1L4Q8NGR5 311 aa10.11□□□□□ -0.79
VAPB-203ENST00000463370 C22orf15Q8WYQ4 148 aa10.11□□□□□ -0.79
VAPB-203ENST00000463370 FANCD2OSQ96PS1 177 aa10.11□□□□□ -0.79
VAPB-203ENST00000463370 PFDN5Q99471 154 aa10.11□□□□□ -0.79
VAPB-203ENST00000463370 TXNDC17Q9BRA2 123 aa10.11□□□□□ -0.79
VAPB-203ENST00000463370 SAV1Q9H4B6 383 aaPredicted RBP10.11□□□□□ -0.79
VAPB-203ENST00000463370 IGKV1-17P01599 117 aa10.1□□□□□ -0.79
VAPB-203ENST00000463370 PSG1P11464 419 aa10.1□□□□□ -0.79
VAPB-203ENST00000463370 CRYBB3P26998 211 aa10.1□□□□□ -0.79
VAPB-203ENST00000463370 RPS10P46783 165 aaKnown RBP10.1□□□□□ -0.79
VAPB-203ENST00000463370 BPIFB3P59826 476 aa10.1□□□□□ -0.79
VAPB-203ENST00000463370 C1orf196B1AJZ1 125 aa10.1□□□□□ -0.79
VAPB-203ENST00000463370 FAM106CPP0CH98 169 aa10.1□□□□□ -0.79
VAPB-203ENST00000463370 SUMO1P63165 101 aaKnown RBP10.1□□□□□ -0.79
VAPB-203ENST00000463370 CLEC12BQ2HXU8 276 aa10.1□□□□□ -0.79
VAPB-203ENST00000463370 C11orf52Q96A22 123 aa10.1□□□□□ -0.79
VAPB-203ENST00000463370 NDUFS8O00217 210 aa10.09□□□□□ -0.79
VAPB-203ENST00000463370 COL8A1P27658 744 aa10.09□□□□□ -0.79
VAPB-203ENST00000463370 RPL35P42766 123 aaKnown RBP10.09□□□□□ -0.79
VAPB-203ENST00000463370 RAB5BP61020 215 aa10.09□□□□□ -0.79
VAPB-203ENST00000463370 OCC1Q8TAD7 63 aa10.09□□□□□ -0.79
VAPB-203ENST00000463370 FXYD5Q96DB9 178 aa10.09□□□□□ -0.79
VAPB-203ENST00000463370 RBM14Q96PK6 669 aaKnown RBP10.09□□□□□ -0.79
VAPB-203ENST00000463370 PAXXQ9BUH6 204 aa10.09□□□□□ -0.79
VAPB-203ENST00000463370 CTDSP1Q9GZU7 261 aa10.09□□□□□ -0.79
VAPB-203ENST00000463370 IGLV11-55A0A075B6I3 123 aa10.09□□□□□ -0.79
VAPB-203ENST00000463370 TRAV40A0A0B4J280 105 aa10.09□□□□□ -0.79
VAPB-203ENST00000463370 IGHV4-38-2P0DP08 117 aa10.09□□□□□ -0.79
VAPB-203ENST00000463370 RNF2Q99496 336 aa10.09□□□□□ -0.79
VAPB-203ENST00000463370 OR51M1Q9H341 326 aa10.09□□□□□ -0.79
VAPB-203ENST00000463370 ELOA3CA0A087WX78 387 aaPredicted RBP10.08□□□□□ -0.8
VAPB-203ENST00000463370 LINC01548A6NM66 108 aa10.08□□□□□ -0.8
VAPB-203ENST00000463370 NPIPB5A8MRT5 1133 aa10.08□□□□□ -0.8
VAPB-203ENST00000463370 K7EN84 100 aa10.08□□□□□ -0.8
VAPB-203ENST00000463370 LYZP61626 148 aa10.08□□□□□ -0.8
VAPB-203ENST00000463370 TMEM219Q86XT9 240 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms