RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 AKR1C4P17516 323 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 FAUP35544 74 aaKnown RBP5.37□□□□□ -1.55
PTPRF-210ENST00000463041 CCR6P51684 374 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 AP2S1P53680 142 aaPredicted RBP5.37□□□□□ -1.55
PTPRF-210ENST00000463041 AP3S2P59780 193 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 YPEL3P61236 119 aaPredicted RBP5.37□□□□□ -1.55
PTPRF-210ENST00000463041 SRPXP78539 464 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 DEFB135Q30KP9 77 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 NMSQ5H8A3 153 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 LYG2Q86SG7 212 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 LGI3Q8N145 548 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 OR1S2Q8NGQ3 325 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 GATAD1Q8WUU5 269 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 DEDD2Q8WXF8 326 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 GRAMD2BQ96HH9 432 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 MCUBQ9NWR8 336 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 MRPL36Q9P0J6 103 aaKnown RBP5.37□□□□□ -1.55
PTPRF-210ENST00000463041 SHPKQ9UHJ6 478 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 ALMS1Q8TCU4 4167 aa5.37□□□□□ -1.55
PTPRF-210ENST00000463041 IGHV3-66A0A0C4DH42 116 aa5.36□□□□□ -1.55
PTPRF-210ENST00000463041 NPY1RP25929 384 aa5.36□□□□□ -1.55
PTPRF-210ENST00000463041 EIF2B2P49770 351 aaKnown RBP5.36□□□□□ -1.55
PTPRF-210ENST00000463041 DEFB131AP59861 70 aa5.36□□□□□ -1.55
PTPRF-210ENST00000463041 SUPT4H1P63272 117 aaKnown RBP5.36□□□□□ -1.55
PTPRF-210ENST00000463041 SMCO1Q147U7 214 aa5.36□□□□□ -1.55
PTPRF-210ENST00000463041 TIGITQ495A1 244 aa5.36□□□□□ -1.55
PTPRF-210ENST00000463041 PRSS54Q6PEW0 395 aa5.36□□□□□ -1.55
PTPRF-210ENST00000463041 LYZL2Q7Z4W2 148 aa5.36□□□□□ -1.55
PTPRF-210ENST00000463041 SLC24A4Q8NFF2 622 aa5.36□□□□□ -1.55
PTPRF-210ENST00000463041 NPIPB3Q92617 1050 aa5.36□□□□□ -1.55
PTPRF-210ENST00000463041 RARRES2Q99969 163 aa5.36□□□□□ -1.55
PTPRF-210ENST00000463041 SLC25A21Q9BQT8 299 aaPredicted RBP5.36□□□□□ -1.55
PTPRF-210ENST00000463041 HSPB7Q9UBY9 170 aa5.36□□□□□ -1.55
PTPRF-210ENST00000463041 U3KQE9 123 aa5.36□□□□□ -1.55
PTPRF-210ENST00000463041 DUXBA0A1W2PPF3 345 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 CXorf65A6NEN9 183 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 NUPR2A6NF83 97 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 HELTA6NFD8 242 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 K7EQG2 157 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 IFNA10P01566 189 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 HNRNPCP07910 306 aaKnown RBP eCLIP5.35□□□□□ -1.55
PTPRF-210ENST00000463041 IGLC1P0CG04 106 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 RD3LP0DJH9 198 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 SLC25A6P12236 298 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 OR10J1P30954 320 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 S100A5P33763 92 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 GPX4P36969 197 aaPredicted RBP5.35□□□□□ -1.55
PTPRF-210ENST00000463041 P2RY1P47900 373 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 RND2P52198 227 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 KLF9Q13886 244 aaPredicted RBP5.35□□□□□ -1.55
PTPRF-210ENST00000463041 RBMS2Q15434 407 aaKnown RBP5.35□□□□□ -1.55
PTPRF-210ENST00000463041 ZNF124Q15973 351 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 PYDC2Q56P42 97 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 TMEM41BQ5BJD5 291 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 TMEM128Q5BJH2 165 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 CEMP1Q6PRD7 247 aaPredicted RBP5.35□□□□□ -1.55
PTPRF-210ENST00000463041 C16orf54Q6UWD8 224 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 STHQ8IWL8 128 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 TOMM5Q8N4H5 51 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 TMEM170AQ8WVE7 144 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 SEPSECSQ9HD40 501 aaKnown RBP5.35□□□□□ -1.55
PTPRF-210ENST00000463041 PFDN2Q9UHV9 154 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 RABAC1Q9UI14 185 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 KLK5Q9Y337 293 aaPredicted RBP5.35□□□□□ -1.55
PTPRF-210ENST00000463041 KMT2AQ03164 3969 aa5.35□□□□□ -1.55
PTPRF-210ENST00000463041 CCDC160A6NGH7 325 aa5.34□□□□□ -1.55
PTPRF-210ENST00000463041 ZNF701M0R085 212 aaPredicted RBP5.34□□□□□ -1.55
PTPRF-210ENST00000463041 PITX3O75364 302 aa5.34□□□□□ -1.55
PTPRF-210ENST00000463041 NXPH3O95157 252 aa5.34□□□□□ -1.55
PTPRF-210ENST00000463041 TOMM40O96008 361 aa5.34□□□□□ -1.55
PTPRF-210ENST00000463041 IFNA4P05014 189 aa5.34□□□□□ -1.55
PTPRF-210ENST00000463041 EWSR1Q01844 656 aaKnown RBP eCLIP5.34□□□□□ -1.55
PTPRF-210ENST00000463041 MORN3Q6PF18 240 aaPredicted RBP5.34□□□□□ -1.55
PTPRF-210ENST00000463041 LRTM2Q8N967 370 aa5.34□□□□□ -1.55
PTPRF-210ENST00000463041 STXBP6Q8NFX7 210 aa5.34□□□□□ -1.55
PTPRF-210ENST00000463041 OR11H2Q8NH07 326 aa5.34□□□□□ -1.55
PTPRF-210ENST00000463041 OR1S1Q8NH92 325 aa5.34□□□□□ -1.55
PTPRF-210ENST00000463041 DTD1Q8TEA8 209 aa5.34□□□□□ -1.55
PTPRF-210ENST00000463041 DCANP1Q8TF63 244 aa5.34□□□□□ -1.55
PTPRF-210ENST00000463041 RBKSQ9H477 322 aa5.34□□□□□ -1.55
PTPRF-210ENST00000463041 PRR13Q9NZ81 148 aa5.34□□□□□ -1.55
PTPRF-210ENST00000463041 EPPK1P58107 5090 aaKnown RBP5.33□□□□□ -1.56
PTPRF-210ENST00000463041 FAM90A26D6RGX4 464 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 BUB3O43684 328 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 MED6O75586 246 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 CA1P00915 261 aaPredicted RBP5.33□□□□□ -1.56
PTPRF-210ENST00000463041 IL4P05112 153 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 FABP1P07148 127 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 SPP1P10451 314 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 PSG1P11464 419 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 RAB11AP62491 216 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 RPP30P78346 268 aaKnown RBP5.33□□□□□ -1.56
PTPRF-210ENST00000463041 DHRS2Q13268 280 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 PMS2P11Q13670 270 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 GAMTQ14353 236 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 LEMD1Q68G75 181 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 TMED4Q7Z7H5 227 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 CCDC190Q86UF4 302 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 FAM24BQ8N5W8 94 aa5.33□□□□□ -1.56
PTPRF-210ENST00000463041 OR51G1Q8NGK1 321 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms