RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 YPEL3P61236 119 aaPredicted RBP11.17□□□□□ -0.62
SKA3-204ENST00000462482 PRR20EP86478 221 aa11.17□□□□□ -0.62
SKA3-204ENST00000462482 PRR20CP86479 221 aa11.17□□□□□ -0.62
SKA3-204ENST00000462482 PRR20DP86480 221 aa11.17□□□□□ -0.62
SKA3-204ENST00000462482 PRR20BP86481 221 aa11.17□□□□□ -0.62
SKA3-204ENST00000462482 PRR20AP86496 221 aa11.17□□□□□ -0.62
SKA3-204ENST00000462482 RBMY1FQ15415 496 aaKnown RBP11.17□□□□□ -0.62
SKA3-204ENST00000462482 BSXQ3C1V8 233 aa11.17□□□□□ -0.62
SKA3-204ENST00000462482 C2orf83Q53S99 150 aa11.17□□□□□ -0.62
SKA3-204ENST00000462482 STEAP1BQ6NZ63 245 aa11.17□□□□□ -0.62
SKA3-204ENST00000462482 DCANP1Q8TF63 244 aa11.17□□□□□ -0.62
SKA3-204ENST00000462482 RBPMSQ93062 196 aaKnown RBP11.17□□□□□ -0.62
SKA3-204ENST00000462482 PFDN2Q9UHV9 154 aa11.17□□□□□ -0.62
SKA3-204ENST00000462482 A0A0G2JRQ6 117 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 DISC1C4P0D8 188 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 CDS2O95674 445 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 CD74P04233 296 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 GIG44P09565 113 aaPredicted RBP11.16□□□□□ -0.62
SKA3-204ENST00000462482 OR5AC1P0C628 307 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 IGLC1P0CG04 106 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 C4BPBP20851 252 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 NPY1RP25929 384 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 MRPS10P82664 201 aaKnown RBP11.16□□□□□ -0.62
SKA3-204ENST00000462482 SSBP1Q04837 148 aaKnown RBP11.16□□□□□ -0.62
SKA3-204ENST00000462482 C16orf54Q6UWD8 224 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 Q6ZTC4 211 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 SLC24A4Q8NFF2 622 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 RAB40CQ96S21 281 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 RNF126Q9BV68 326 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 NAA60Q9H7X0 242 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 CLEC5AQ9NY25 188 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 CACNG5Q9UF02 275 aa11.16□□□□□ -0.62
SKA3-204ENST00000462482 IGHV4-4A0A075B6R2 117 aa11.15□□□□□ -0.62
SKA3-204ENST00000462482 GABARAPH6UMI1 98 aa11.15□□□□□ -0.62
SKA3-204ENST00000462482 RGS5O15539 181 aa11.15□□□□□ -0.62
SKA3-204ENST00000462482 GABARAPO95166 117 aa11.15□□□□□ -0.62
SKA3-204ENST00000462482 IL4P05112 153 aa11.15□□□□□ -0.62
SKA3-204ENST00000462482 NUP62P37198 522 aaPredicted RBP11.15□□□□□ -0.62
SKA3-204ENST00000462482 SURF2Q15527 256 aaPredicted RBP11.15□□□□□ -0.62
SKA3-204ENST00000462482 AARDQ4LEZ3 155 aa11.15□□□□□ -0.62
SKA3-204ENST00000462482 PRSS54Q6PEW0 395 aa11.15□□□□□ -0.62
SKA3-204ENST00000462482 Q6ZRM9 215 aa11.15□□□□□ -0.62
SKA3-204ENST00000462482 OR4D10Q8NGI6 311 aa11.15□□□□□ -0.62
SKA3-204ENST00000462482 ACY3Q96HD9 319 aa11.15□□□□□ -0.62
SKA3-204ENST00000462482 U3KQE9 123 aa11.15□□□□□ -0.62
SKA3-204ENST00000462482 X6R8D5 127 aa11.15□□□□□ -0.62
SKA3-204ENST00000462482 RD3LP0DJH9 198 aa11.14□□□□□ -0.63
SKA3-204ENST00000462482 GPR107Q5VW38 600 aa11.14□□□□□ -0.63
SKA3-204ENST00000462482 TMEM268Q5VZI3 342 aa11.14□□□□□ -0.63
SKA3-204ENST00000462482 GLMPQ8WWB7 406 aa11.14□□□□□ -0.63
SKA3-204ENST00000462482 SEPSECSQ9HD40 501 aaKnown RBP11.14□□□□□ -0.63
SKA3-204ENST00000462482 NRN1Q9NPD7 142 aa11.14□□□□□ -0.63
SKA3-204ENST00000462482 KCNIP3Q9Y2W7 256 aa11.14□□□□□ -0.63
SKA3-204ENST00000462482 ELOA3CA0A087WX78 387 aaPredicted RBP11.13□□□□□ -0.63
SKA3-204ENST00000462482 DEFB131BA0A096LNP1 70 aa11.13□□□□□ -0.63
SKA3-204ENST00000462482 FAM90A26D6RGX4 464 aa11.13□□□□□ -0.63
SKA3-204ENST00000462482 IFNA10P01566 189 aa11.13□□□□□ -0.63
SKA3-204ENST00000462482 SIGLEC15Q6ZMC9 328 aa11.13□□□□□ -0.63
SKA3-204ENST00000462482 LINC00336Q6ZUF6 198 aa11.13□□□□□ -0.63
SKA3-204ENST00000462482 SELENOHQ8IZQ5 122 aaKnown RBP11.13□□□□□ -0.63
SKA3-204ENST00000462482 GLYATL2Q8WU03 294 aa11.13□□□□□ -0.63
SKA3-204ENST00000462482 NPIPB3Q92617 1050 aa11.13□□□□□ -0.63
SKA3-204ENST00000462482 GPR146Q96CH1 333 aa11.13□□□□□ -0.63
SKA3-204ENST00000462482 TOMM40O96008 361 aa11.12□□□□□ -0.63
SKA3-204ENST00000462482 SULT1A3P0DMM9 295 aa11.12□□□□□ -0.63
SKA3-204ENST00000462482 SULT1A4P0DMN0 295 aa11.12□□□□□ -0.63
SKA3-204ENST00000462482 P0DMU3 169 aa11.12□□□□□ -0.63
SKA3-204ENST00000462482 FAM231AP0DMU4 169 aa11.12□□□□□ -0.63
SKA3-204ENST00000462482 FAM231CP0DMU5 169 aa11.12□□□□□ -0.63
SKA3-204ENST00000462482 CSNK1G2-AS1Q8NCQ2 148 aa11.12□□□□□ -0.63
SKA3-204ENST00000462482 SCGB3A2Q96PL1 93 aa11.12□□□□□ -0.63
SKA3-204ENST00000462482 PRRT1Q99946 306 aa11.12□□□□□ -0.63
SKA3-204ENST00000462482 RTBDNQ9BSG5 229 aaPredicted RBP11.12□□□□□ -0.63
SKA3-204ENST00000462482 NDUFAF3Q9BU61 184 aa11.12□□□□□ -0.63
SKA3-204ENST00000462482 XCL2Q9UBD3 114 aa11.12□□□□□ -0.63
SKA3-204ENST00000462482 CRYM-AS1A6NIL9 109 aa11.11□□□□□ -0.63
SKA3-204ENST00000462482 AMBPP02760 352 aa11.11□□□□□ -0.63
SKA3-204ENST00000462482 FABP1P07148 127 aa11.11□□□□□ -0.63
SKA3-204ENST00000462482 AKAIN1P0CW23 69 aa11.11□□□□□ -0.63
SKA3-204ENST00000462482 ID1P41134 155 aa11.11□□□□□ -0.63
SKA3-204ENST00000462482 USF2Q15853 346 aaPredicted RBP11.11□□□□□ -0.63
SKA3-204ENST00000462482 CTF1Q16619 201 aa11.11□□□□□ -0.63
SKA3-204ENST00000462482 FAAP20Q6NZ36 180 aa11.11□□□□□ -0.63
SKA3-204ENST00000462482 LHFPL5Q8TAF8 219 aa11.11□□□□□ -0.63
SKA3-204ENST00000462482 IL22RA2Q969J5 263 aa11.11□□□□□ -0.63
SKA3-204ENST00000462482 PBDC1Q9BVG4 233 aa11.11□□□□□ -0.63
SKA3-204ENST00000462482 TMEM56-RWDD3S4R434 201 aa11.11□□□□□ -0.63
SKA3-204ENST00000462482 U3KQ87 197 aa11.11□□□□□ -0.63
SKA3-204ENST00000462482 TMEM189A5PLL7 270 aa11.1□□□□□ -0.63
SKA3-204ENST00000462482 H3BMM0 161 aa11.1□□□□□ -0.63
SKA3-204ENST00000462482 BUB3O43684 328 aa11.1□□□□□ -0.63
SKA3-204ENST00000462482 NXPH3O95157 252 aa11.1□□□□□ -0.63
SKA3-204ENST00000462482 NKX2-1P43699 371 aaPredicted RBP11.1□□□□□ -0.63
SKA3-204ENST00000462482 KLF9Q13886 244 aaPredicted RBP11.1□□□□□ -0.63
SKA3-204ENST00000462482 C12orf74Q32Q52 190 aa11.1□□□□□ -0.63
SKA3-204ENST00000462482 ZNF767PQ75MW2 155 aa11.1□□□□□ -0.63
SKA3-204ENST00000462482 OR51G1Q8NGK1 321 aa11.1□□□□□ -0.63
SKA3-204ENST00000462482 KRTAP17-1Q9BYP8 105 aa11.1□□□□□ -0.63
SKA3-204ENST00000462482 NAA50Q9GZZ1 169 aaKnown RBP11.1□□□□□ -0.63
SKA3-204ENST00000462482 RABL2AQ9UBK7 228 aaPredicted RBP11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms