RNA–Protein interactions for RNA: ENST00000461525.5

COL1A2-202, Transcript of collagen type I alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL1A2, Length 776 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A2-202ENST00000461525 GRAMD2BQ96HH9 432 aa12.97□□□□□ -0.33
COL1A2-202ENST00000461525 CACFD1Q9UGQ2 172 aa12.97□□□□□ -0.33
COL1A2-202ENST00000461525 SCP2D1Q9UJQ7 156 aa12.97□□□□□ -0.33
COL1A2-202ENST00000461525 KCNIP3Q9Y2W7 256 aa12.97□□□□□ -0.33
COL1A2-202ENST00000461525 TMEM56-RWDD3S4R434 201 aa12.97□□□□□ -0.33
COL1A2-202ENST00000461525 BIRC6Q9NR09 4857 aa12.97□□□□□ -0.33
COL1A2-202ENST00000461525 HYDINQ4G0P3 5121 aa12.96□□□□□ -0.33
COL1A2-202ENST00000461525 ANKRD20A5PA0PJZ0 165 aa12.96□□□□□ -0.33
COL1A2-202ENST00000461525 GSTZ1O43708 216 aaPredicted RBP12.96□□□□□ -0.33
COL1A2-202ENST00000461525 NOL3O60936 208 aaKnown RBP12.96□□□□□ -0.33
COL1A2-202ENST00000461525 IGLC1P0CG04 106 aa12.96□□□□□ -0.33
COL1A2-202ENST00000461525 SULT1A3P0DMM9 295 aa12.96□□□□□ -0.33
COL1A2-202ENST00000461525 SULT1A4P0DMN0 295 aa12.96□□□□□ -0.33
COL1A2-202ENST00000461525 TMEM187Q14656 261 aa12.96□□□□□ -0.33
COL1A2-202ENST00000461525 PRSS54Q6PEW0 395 aa12.96□□□□□ -0.33
COL1A2-202ENST00000461525 STHQ8IWL8 128 aa12.96□□□□□ -0.33
COL1A2-202ENST00000461525 Q8WTZ3 238 aa12.96□□□□□ -0.33
COL1A2-202ENST00000461525 PHLDA1Q8WV24 401 aaPredicted RBP12.96□□□□□ -0.33
COL1A2-202ENST00000461525 IL22RA2Q969J5 263 aa12.96□□□□□ -0.33
COL1A2-202ENST00000461525 SCGB3A2Q96PL1 93 aa12.96□□□□□ -0.33
COL1A2-202ENST00000461525 C11orf68Q9H3H3 251 aaKnown RBP12.96□□□□□ -0.33
COL1A2-202ENST00000461525 RSL24D1Q9UHA3 163 aaKnown RBP12.96□□□□□ -0.33
COL1A2-202ENST00000461525 K7EQG2 157 aa12.95□□□□□ -0.34
COL1A2-202ENST00000461525 NXPH3O95157 252 aa12.95□□□□□ -0.34
COL1A2-202ENST00000461525 NPY1RP25929 384 aa12.95□□□□□ -0.34
COL1A2-202ENST00000461525 OR10J1P30954 320 aa12.95□□□□□ -0.34
COL1A2-202ENST00000461525 EIF2B2P49770 351 aaKnown RBP12.95□□□□□ -0.34
COL1A2-202ENST00000461525 ETFRF1Q6IPR1 90 aa12.95□□□□□ -0.34
COL1A2-202ENST00000461525 NOXA1Q86UR1 476 aa12.95□□□□□ -0.34
COL1A2-202ENST00000461525 MFFQ9GZY8 342 aa12.95□□□□□ -0.34
COL1A2-202ENST00000461525 MCUBQ9NWR8 336 aa12.95□□□□□ -0.34
COL1A2-202ENST00000461525 PRR13Q9NZ81 148 aa12.95□□□□□ -0.34
COL1A2-202ENST00000461525 ZNF688P0C7X2 276 aa12.94□□□□□ -0.34
COL1A2-202ENST00000461525 YPEL3P61236 119 aaPredicted RBP12.94□□□□□ -0.34
COL1A2-202ENST00000461525 RBMS2Q15434 407 aaKnown RBP12.94□□□□□ -0.34
COL1A2-202ENST00000461525 C11orf45Q8TAV5 145 aa12.94□□□□□ -0.34
COL1A2-202ENST00000461525 TMEM170AQ8WVE7 144 aa12.94□□□□□ -0.34
COL1A2-202ENST00000461525 HELTA6NFD8 242 aa12.93□□□□□ -0.34
COL1A2-202ENST00000461525 HNRNPCP07910 306 aaKnown RBP eCLIP12.93□□□□□ -0.34
COL1A2-202ENST00000461525 NMSQ5H8A3 153 aa12.93□□□□□ -0.34
COL1A2-202ENST00000461525 DCANP1Q8TF63 244 aa12.93□□□□□ -0.34
COL1A2-202ENST00000461525 ACY3Q96HD9 319 aa12.93□□□□□ -0.34
COL1A2-202ENST00000461525 SLIRPQ9GZT3 109 aaKnown RBP12.93□□□□□ -0.34
COL1A2-202ENST00000461525 U3KQE9 123 aa12.93□□□□□ -0.34
COL1A2-202ENST00000461525 A0A0B4J2A0 478 aa12.92□□□□□ -0.34
COL1A2-202ENST00000461525 FABP12A6NFH5 140 aa12.92□□□□□ -0.34
COL1A2-202ENST00000461525 IFNA10P01566 189 aa12.92□□□□□ -0.34
COL1A2-202ENST00000461525 IL4P05112 153 aa12.92□□□□□ -0.34
COL1A2-202ENST00000461525 AKR1C4P17516 323 aa12.92□□□□□ -0.34
COL1A2-202ENST00000461525 CCR6P51684 374 aa12.92□□□□□ -0.34
COL1A2-202ENST00000461525 NANOS2P60321 138 aaKnown RBP12.92□□□□□ -0.34
COL1A2-202ENST00000461525 DHRS2Q13268 280 aa12.92□□□□□ -0.34
COL1A2-202ENST00000461525 TRPT1Q86TN4 253 aaKnown RBP12.92□□□□□ -0.34
COL1A2-202ENST00000461525 NPIPB3Q92617 1050 aa12.92□□□□□ -0.34
COL1A2-202ENST00000461525 FBXL17Q9UF56 701 aa12.92□□□□□ -0.34
COL1A2-202ENST00000461525 SHPKQ9UHJ6 478 aa12.92□□□□□ -0.34
COL1A2-202ENST00000461525 KNCNA6PVL3 124 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 H3BMQ9 156 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 DEFB4AO15263 64 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 IFNA4P05014 189 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 SPP1P10451 314 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 ANXA3P12429 323 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 TNFSF8P32971 234 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 AP2S1P53680 142 aaPredicted RBP12.91□□□□□ -0.34
COL1A2-202ENST00000461525 SRPXP78539 464 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 SMCO1Q147U7 214 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 USF2Q15853 346 aaPredicted RBP12.91□□□□□ -0.34
COL1A2-202ENST00000461525 TMEM41BQ5BJD5 291 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 MORN3Q6PF18 240 aaPredicted RBP12.91□□□□□ -0.34
COL1A2-202ENST00000461525 C16orf54Q6UWD8 224 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 MCFD2Q8NI22 146 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 DTD1Q8TEA8 209 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 GLMPQ8WWB7 406 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 HSPB7Q9UBY9 170 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 U3KQ87 197 aa12.91□□□□□ -0.34
COL1A2-202ENST00000461525 TOMM40O96008 361 aa12.9□□□□□ -0.34
COL1A2-202ENST00000461525 RD3LP0DJH9 198 aa12.9□□□□□ -0.34
COL1A2-202ENST00000461525 SUPT4H1P63272 117 aaKnown RBP12.9□□□□□ -0.34
COL1A2-202ENST00000461525 ACTL10Q5JWF8 245 aa12.9□□□□□ -0.34
COL1A2-202ENST00000461525 LYZL2Q7Z4W2 148 aa12.9□□□□□ -0.34
COL1A2-202ENST00000461525 LGI3Q8N145 548 aa12.9□□□□□ -0.34
COL1A2-202ENST00000461525 SOSTQ9BQB4 213 aa12.9□□□□□ -0.34
COL1A2-202ENST00000461525 GIG44P09565 113 aaPredicted RBP12.89□□□□□ -0.35
COL1A2-202ENST00000461525 FAUP35544 74 aaKnown RBP12.89□□□□□ -0.35
COL1A2-202ENST00000461525 PSMG4Q5JS54 123 aa12.89□□□□□ -0.35
COL1A2-202ENST00000461525 RBKSQ9H477 322 aa12.89□□□□□ -0.35
COL1A2-202ENST00000461525 PIGBOS1A0A0B4J2F0 54 aa12.88□□□□□ -0.35
COL1A2-202ENST00000461525 C4BPBP20851 252 aa12.88□□□□□ -0.35
COL1A2-202ENST00000461525 AP3S2P59780 193 aa12.88□□□□□ -0.35
COL1A2-202ENST00000461525 Q8NAQ8 132 aa12.88□□□□□ -0.35
COL1A2-202ENST00000461525 OR1S1Q8NH92 325 aa12.88□□□□□ -0.35
COL1A2-202ENST00000461525 IGHV4-28A0A0C4DH34 117 aa12.87□□□□□ -0.35
COL1A2-202ENST00000461525 PSG1P11464 419 aa12.87□□□□□ -0.35
COL1A2-202ENST00000461525 ATP5IP56385 69 aaPredicted RBP12.87□□□□□ -0.35
COL1A2-202ENST00000461525 SNRPD3P62318 126 aaKnown RBP12.87□□□□□ -0.35
COL1A2-202ENST00000461525 KLF9Q13886 244 aaPredicted RBP12.87□□□□□ -0.35
COL1A2-202ENST00000461525 TMED4Q7Z7H5 227 aa12.87□□□□□ -0.35
COL1A2-202ENST00000461525 RAB40CQ96S21 281 aa12.87□□□□□ -0.35
COL1A2-202ENST00000461525 NRN1Q9NPD7 142 aa12.87□□□□□ -0.35
COL1A2-202ENST00000461525 FAM90A26D6RGX4 464 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms