RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 TMED4Q7Z7H5 227 aa11.39□□□□□ -0.59
NUP50-213ENST00000461437 TRIM63Q969Q1 353 aa11.39□□□□□ -0.59
NUP50-213ENST00000461437 RBKSQ9H477 322 aa11.39□□□□□ -0.59
NUP50-213ENST00000461437 RABL2AQ9UBK7 228 aaPredicted RBP11.39□□□□□ -0.59
NUP50-213ENST00000461437 RABL2BQ9UNT1 228 aa11.39□□□□□ -0.59
NUP50-213ENST00000461437 TP53TG1Q9Y2A0 90 aa11.39□□□□□ -0.59
NUP50-213ENST00000461437 NPY1RP25929 384 aa11.38□□□□□ -0.59
NUP50-213ENST00000461437 P2RY1P47900 373 aa11.38□□□□□ -0.59
NUP50-213ENST00000461437 PAFAH1B2P68402 229 aa11.38□□□□□ -0.59
NUP50-213ENST00000461437 ZNF79Q15937 498 aa11.38□□□□□ -0.59
NUP50-213ENST00000461437 NMSQ5H8A3 153 aa11.38□□□□□ -0.59
NUP50-213ENST00000461437 GSG1LQ6UXU4 331 aa11.38□□□□□ -0.59
NUP50-213ENST00000461437 NPIPB3Q92617 1050 aa11.38□□□□□ -0.59
NUP50-213ENST00000461437 ACY3Q96HD9 319 aa11.38□□□□□ -0.59
NUP50-213ENST00000461437 METTL26Q96S19 204 aa11.38□□□□□ -0.59
NUP50-213ENST00000461437 CSTL1Q9H114 145 aa11.38□□□□□ -0.59
NUP50-213ENST00000461437 KCNIP3Q9Y2W7 256 aa11.38□□□□□ -0.59
NUP50-213ENST00000461437 RPS10-NUDT3A0A1W2PQS6 291 aa11.37□□□□□ -0.59
NUP50-213ENST00000461437 KNCNA6PVL3 124 aa11.37□□□□□ -0.59
NUP50-213ENST00000461437 DEFB4AO15263 64 aa11.37□□□□□ -0.59
NUP50-213ENST00000461437 CA1P00915 261 aaPredicted RBP11.37□□□□□ -0.59
NUP50-213ENST00000461437 ZNF688P0C7X2 276 aa11.37□□□□□ -0.59
NUP50-213ENST00000461437 CRYBB3P26998 211 aa11.37□□□□□ -0.59
NUP50-213ENST00000461437 OR10J1P30954 320 aa11.37□□□□□ -0.59
NUP50-213ENST00000461437 USF2Q15853 346 aaPredicted RBP11.37□□□□□ -0.59
NUP50-213ENST00000461437 IL22RA2Q969J5 263 aa11.37□□□□□ -0.59
NUP50-213ENST00000461437 A0A0B4J2A0 478 aa11.36□□□□□ -0.59
NUP50-213ENST00000461437 MPTX1A8MV57 137 aa11.36□□□□□ -0.59
NUP50-213ENST00000461437 K7EQG2 157 aa11.36□□□□□ -0.59
NUP50-213ENST00000461437 IFNA10P01566 189 aa11.36□□□□□ -0.59
NUP50-213ENST00000461437 SMCO1Q147U7 214 aa11.36□□□□□ -0.59
NUP50-213ENST00000461437 TOMM5Q8N4H5 51 aa11.36□□□□□ -0.59
NUP50-213ENST00000461437 OR1S2Q8NGQ3 325 aa11.36□□□□□ -0.59
NUP50-213ENST00000461437 RNASEH2CQ8TDP1 164 aaKnown RBP11.36□□□□□ -0.59
NUP50-213ENST00000461437 DTD1Q8TEA8 209 aa11.36□□□□□ -0.59
NUP50-213ENST00000461437 SHPKQ9UHJ6 478 aa11.36□□□□□ -0.59
NUP50-213ENST00000461437 IL4P05112 153 aa11.35□□□□□ -0.59
NUP50-213ENST00000461437 IAPPP10997 89 aa11.35□□□□□ -0.59
NUP50-213ENST00000461437 CCR6P51684 374 aa11.35□□□□□ -0.59
NUP50-213ENST00000461437 LGI3Q8N145 548 aa11.35□□□□□ -0.59
NUP50-213ENST00000461437 OR1S1Q8NH92 325 aa11.35□□□□□ -0.59
NUP50-213ENST00000461437 SCGB3A2Q96PL1 93 aa11.35□□□□□ -0.59
NUP50-213ENST00000461437 RARRES2Q99969 163 aa11.35□□□□□ -0.59
NUP50-213ENST00000461437 RBM38Q9H0Z9 239 aaKnown RBP11.35□□□□□ -0.59
NUP50-213ENST00000461437 TMEM231Q9H6L2 316 aa11.35□□□□□ -0.59
NUP50-213ENST00000461437 HSPB7Q9UBY9 170 aa11.35□□□□□ -0.59
NUP50-213ENST00000461437 KMT2AQ03164 3969 aa11.35□□□□□ -0.59
NUP50-213ENST00000461437 TRAV30A0A087WSZ9 112 aa11.34□□□□□ -0.59
NUP50-213ENST00000461437 A0A1W2PS18 150 aa11.34□□□□□ -0.59
NUP50-213ENST00000461437 HNRNPCP07910 306 aaKnown RBP eCLIP11.34□□□□□ -0.59
NUP50-213ENST00000461437 SLC25A4P12235 298 aa11.34□□□□□ -0.59
NUP50-213ENST00000461437 VAMP1P23763 118 aa11.34□□□□□ -0.59
NUP50-213ENST00000461437 CMC4P56277 68 aaPredicted RBP11.34□□□□□ -0.59
NUP50-213ENST00000461437 OR11H2Q8NH07 326 aa11.34□□□□□ -0.59
NUP50-213ENST00000461437 DCANP1Q8TF63 244 aa11.34□□□□□ -0.59
NUP50-213ENST00000461437 Q8WTZ3 238 aa11.34□□□□□ -0.59
NUP50-213ENST00000461437 U3KQE9 123 aa11.34□□□□□ -0.59
NUP50-213ENST00000461437 SCGB2A1O75556 95 aa11.33□□□□□ -0.6
NUP50-213ENST00000461437 ANXA3P12429 323 aa11.33□□□□□ -0.6
NUP50-213ENST00000461437 C4BPBP20851 252 aa11.33□□□□□ -0.6
NUP50-213ENST00000461437 NANOS2P60321 138 aaKnown RBP11.33□□□□□ -0.6
NUP50-213ENST00000461437 YPEL3P61236 119 aaPredicted RBP11.33□□□□□ -0.6
NUP50-213ENST00000461437 DHRS2Q13268 280 aa11.33□□□□□ -0.6
NUP50-213ENST00000461437 C16orf54Q6UWD8 224 aa11.33□□□□□ -0.6
NUP50-213ENST00000461437 CCDC190Q86UF4 302 aa11.33□□□□□ -0.6
NUP50-213ENST00000461437 OR51G1Q8NGK1 321 aa11.33□□□□□ -0.6
NUP50-213ENST00000461437 GLMPQ8WWB7 406 aa11.33□□□□□ -0.6
NUP50-213ENST00000461437 LINC00476Q8WZB0 136 aa11.33□□□□□ -0.6
NUP50-213ENST00000461437 PAIP2BQ9ULR5 123 aaKnown RBP11.33□□□□□ -0.6
NUP50-213ENST00000461437 TRAV2A0A0B4J234 112 aa11.32□□□□□ -0.6
NUP50-213ENST00000461437 LY6G6CO95867 125 aa11.32□□□□□ -0.6
NUP50-213ENST00000461437 TOMM40O96008 361 aa11.32□□□□□ -0.6
NUP50-213ENST00000461437 IFNA4P05014 189 aa11.32□□□□□ -0.6
NUP50-213ENST00000461437 CD5P06127 495 aa11.32□□□□□ -0.6
NUP50-213ENST00000461437 GIG44P09565 113 aaPredicted RBP11.32□□□□□ -0.6
NUP50-213ENST00000461437 PSG1P11464 419 aa11.32□□□□□ -0.6
NUP50-213ENST00000461437 FAUP35544 74 aaKnown RBP11.32□□□□□ -0.6
NUP50-213ENST00000461437 ZNF90Q03938 601 aa11.32□□□□□ -0.6
NUP50-213ENST00000461437 PPP1R1AQ13522 171 aa11.32□□□□□ -0.6
NUP50-213ENST00000461437 ACTL10Q5JWF8 245 aa11.32□□□□□ -0.6
NUP50-213ENST00000461437 CEMP1Q6PRD7 247 aaPredicted RBP11.32□□□□□ -0.6
NUP50-213ENST00000461437 STHQ8IWL8 128 aa11.32□□□□□ -0.6
NUP50-213ENST00000461437 NARS2Q96I59 477 aaKnown RBP11.32□□□□□ -0.6
NUP50-213ENST00000461437 PBDC1Q9BVG4 233 aa11.32□□□□□ -0.6
NUP50-213ENST00000461437 MAGT1Q9H0U3 335 aa11.32□□□□□ -0.6
NUP50-213ENST00000461437 CLEC5AQ9NY25 188 aa11.32□□□□□ -0.6
NUP50-213ENST00000461437 IGKV1D-37A0A075B6S9 117 aa11.31□□□□□ -0.6
NUP50-213ENST00000461437 LINC00854A0A1B0GVQ3 168 aa11.31□□□□□ -0.6
NUP50-213ENST00000461437 NUPR2A6NF83 97 aa11.31□□□□□ -0.6
NUP50-213ENST00000461437 PITX3O75364 302 aa11.31□□□□□ -0.6
NUP50-213ENST00000461437 HOXB5P09067 269 aa11.31□□□□□ -0.6
NUP50-213ENST00000461437 RD3LP0DJH9 198 aa11.31□□□□□ -0.6
NUP50-213ENST00000461437 S100A5P33763 92 aa11.31□□□□□ -0.6
NUP50-213ENST00000461437 DEFB1P60022 68 aa11.31□□□□□ -0.6
NUP50-213ENST00000461437 PSMG4Q5JS54 123 aa11.31□□□□□ -0.6
NUP50-213ENST00000461437 ETFRF1Q6IPR1 90 aa11.31□□□□□ -0.6
NUP50-213ENST00000461437 TRPT1Q86TN4 253 aaKnown RBP11.31□□□□□ -0.6
NUP50-213ENST00000461437 PHLDA1Q8WV24 401 aaPredicted RBP11.31□□□□□ -0.6
NUP50-213ENST00000461437 GRAMD2BQ96HH9 432 aa11.31□□□□□ -0.6
NUP50-213ENST00000461437 FBXL17Q9UF56 701 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 86.6 ms