RNA–Protein interactions for RNA: ENST00000460547.6

YIPF3-205, Transcript of Yip1 domain family member 3, humanhuman

TSL 1 (best)

Gene YIPF3, Length 1,674 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-205ENST00000460547 PFDN5Q99471 154 aa13.46□□□□□ -0.26
YIPF3-205ENST00000460547 YTHDF2Q9Y5A9 579 aaKnown RBP13.46□□□□□ -0.26
YIPF3-205ENST00000460547 GATA2P23769 480 aaPredicted RBP13.45□□□□□ -0.26
YIPF3-205ENST00000460547 PDLIM4P50479 330 aa13.45□□□□□ -0.26
YIPF3-205ENST00000460547 MMDQ15546 238 aa13.45□□□□□ -0.26
YIPF3-205ENST00000460547 Q71RC1 249 aaPredicted RBP13.45□□□□□ -0.26
YIPF3-205ENST00000460547 LHFPL4Q7Z7J7 247 aa13.45□□□□□ -0.26
YIPF3-205ENST00000460547 TMEM116Q8NCL8 245 aa13.45□□□□□ -0.26
YIPF3-205ENST00000460547 OR51G1Q8NGK1 321 aa13.45□□□□□ -0.26
YIPF3-205ENST00000460547 OR1L4Q8NGR5 311 aa13.45□□□□□ -0.26
YIPF3-205ENST00000460547 C22orf15Q8WYQ4 148 aa13.45□□□□□ -0.26
YIPF3-205ENST00000460547 SLC25A33Q9BSK2 321 aa13.45□□□□□ -0.26
YIPF3-205ENST00000460547 IGHV4-30-2A0A087WSY4 118 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 FOXH1O75593 365 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 LY6G6DO95868 133 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 C8orf88P0DMB2 117 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 LMO4P61968 165 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 SMUG1Q53HV7 270 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 ZNF343Q6P1L6 599 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 MAPK1IP1LQ8NDC0 245 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 TMEM37Q8WXS4 190 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 ZNF503Q96F45 646 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 TRGV9Q99603 122 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 MRPL36Q9P0J6 103 aaKnown RBP13.44□□□□□ -0.26
YIPF3-205ENST00000460547 HILPDAQ9Y5L2 63 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 FLNAP21333 2647 aaKnown RBP13.44□□□□□ -0.26
YIPF3-205ENST00000460547 ACANP16112 2415 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 NDUFB4O95168 129 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 SLC25A16P16260 332 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 BPIFB3P59826 476 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 PLGLAQ15195 96 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 OR2T10Q8NGZ9 312 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 MISP3Q96FF7 219 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 EAF1Q96JC9 268 aaPredicted RBP13.44□□□□□ -0.26
YIPF3-205ENST00000460547 DNAJC4Q9NNZ3 241 aa13.44□□□□□ -0.26
YIPF3-205ENST00000460547 TRBV24-1A0A075B6N3 115 aa13.43□□□□□ -0.26
YIPF3-205ENST00000460547 NDUFS8O00217 210 aa13.43□□□□□ -0.26
YIPF3-205ENST00000460547 FCN1O00602 326 aa13.43□□□□□ -0.26
YIPF3-205ENST00000460547 CXCL1P09341 107 aa13.43□□□□□ -0.26
YIPF3-205ENST00000460547 RIPPLY3P57055 190 aa13.43□□□□□ -0.26
YIPF3-205ENST00000460547 EBI3Q14213 229 aa13.43□□□□□ -0.26
YIPF3-205ENST00000460547 ZFP82Q8N141 532 aa13.43□□□□□ -0.26
YIPF3-205ENST00000460547 Q8N6K4 173 aa13.43□□□□□ -0.26
YIPF3-205ENST00000460547 C10orf105Q8TEF2 133 aa13.43□□□□□ -0.26
YIPF3-205ENST00000460547 ANAPC16Q96DE5 110 aa13.43□□□□□ -0.26
YIPF3-205ENST00000460547 UHRF2Q96PU4 802 aa13.43□□□□□ -0.26
YIPF3-205ENST00000460547 BPESC1Q9GZL8 116 aa13.43□□□□□ -0.26
YIPF3-205ENST00000460547 TBL2Q9Y4P3 447 aaKnown RBP13.43□□□□□ -0.26
YIPF3-205ENST00000460547 SCO2A0A1W2PP80 73 aa13.42□□□□□ -0.26
YIPF3-205ENST00000460547 TGOLN2O43493 480 aa13.42□□□□□ -0.26
YIPF3-205ENST00000460547 COX7A2P2O60397 106 aa13.42□□□□□ -0.26
YIPF3-205ENST00000460547 SSX2Q16385 188 aa13.42□□□□□ -0.26
YIPF3-205ENST00000460547 LINC01551Q86U37 167 aa13.42□□□□□ -0.26
YIPF3-205ENST00000460547 FAM167A-AS1Q96KT0 104 aa13.42□□□□□ -0.26
YIPF3-205ENST00000460547 PIMREGQ9BSJ6 248 aa13.42□□□□□ -0.26
YIPF3-205ENST00000460547 POLR3KQ9Y2Y1 108 aaPredicted RBP13.42□□□□□ -0.26
YIPF3-205ENST00000460547 URGCP-MRPS24S4R325 110 aa13.42□□□□□ -0.26
YIPF3-205ENST00000460547 ELOA3CA0A087WX78 387 aaPredicted RBP13.41□□□□□ -0.26
YIPF3-205ENST00000460547 LCN2P80188 198 aa13.41□□□□□ -0.26
YIPF3-205ENST00000460547 ZNF90Q03938 601 aa13.41□□□□□ -0.26
YIPF3-205ENST00000460547 KIAA0141Q14154 515 aaPredicted RBP13.41□□□□□ -0.26
YIPF3-205ENST00000460547 C5orf64Q2M2E5 130 aa13.41□□□□□ -0.26
YIPF3-205ENST00000460547 C16orf82Q7Z2V1 217 aa13.41□□□□□ -0.26
YIPF3-205ENST00000460547 OR1L6Q8NGR2 347 aa13.41□□□□□ -0.26
YIPF3-205ENST00000460547 SSX3Q99909 188 aa13.41□□□□□ -0.26
YIPF3-205ENST00000460547 SAV1Q9H4B6 383 aaPredicted RBP13.41□□□□□ -0.26
YIPF3-205ENST00000460547 TNFRSF19Q9NS68 423 aa13.41□□□□□ -0.26
YIPF3-205ENST00000460547 DMRT1Q9Y5R6 373 aa13.41□□□□□ -0.26
YIPF3-205ENST00000460547 NAV3Q8IVL0 2385 aa13.41□□□□□ -0.26
YIPF3-205ENST00000460547 TGIF2-C20orf24A0A0A6YYL0 155 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 H7BYZ3 331 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 OR7C2O60412 319 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 UBE2E1P51965 193 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 LGALS4P56470 323 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 C10orf113Q5VZT2 155 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 C2CD4CQ8TF44 421 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 PYGO2Q9BRQ0 406 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 DERL1Q9BUN8 251 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 SLC25A2Q9BXI2 301 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 LY96Q9Y6Y9 160 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 A0A1W2PRE2 83 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 C9JCJ5 164 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 TOX4O94842 621 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 PFN1P07737 140 aaKnown RBP13.4□□□□□ -0.26
YIPF3-205ENST00000460547 RPS10P46783 165 aaKnown RBP13.4□□□□□ -0.26
YIPF3-205ENST00000460547 PLP1P60201 277 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 PATE2Q6UY27 113 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 DYNAPQ8N1N2 210 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 OR4X1Q8NH49 305 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 TBX15Q96SF7 602 aa13.4□□□□□ -0.26
YIPF3-205ENST00000460547 TRBV20OR9-2A0A075B6H5 130 aa13.39□□□□□ -0.27
YIPF3-205ENST00000460547 I3L2K1 104 aa13.39□□□□□ -0.27
YIPF3-205ENST00000460547 CNIH1O95406 144 aa13.39□□□□□ -0.27
YIPF3-205ENST00000460547 IGHV3-48P01763 117 aa13.39□□□□□ -0.27
YIPF3-205ENST00000460547 LOXL1Q08397 574 aaPredicted RBP13.39□□□□□ -0.27
YIPF3-205ENST00000460547 C19orf35Q6ZS72 473 aa13.39□□□□□ -0.27
YIPF3-205ENST00000460547 FAM210BQ96KR6 192 aa13.39□□□□□ -0.27
YIPF3-205ENST00000460547 ZNF355PQ9NSJ1 428 aa13.39□□□□□ -0.27
YIPF3-205ENST00000460547 A0A1W2PRD5 423 aa13.38□□□□□ -0.27
YIPF3-205ENST00000460547 A0A1W2PRF3 423 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms