RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 OR1N2Q8NGR9 330 aa12.16□□□□□ -0.46
PTPRU-205ENST00000460170 C15orf62A8K5M9 175 aa12.16□□□□□ -0.46
PTPRU-205ENST00000460170 C9JQL5 133 aa12.16□□□□□ -0.46
PTPRU-205ENST00000460170 HIST1H1AQ02539 215 aaPredicted RBP12.16□□□□□ -0.46
PTPRU-205ENST00000460170 TIMM23O14925 209 aa12.16□□□□□ -0.46
PTPRU-205ENST00000460170 CD24P25063 80 aa12.16□□□□□ -0.46
PTPRU-205ENST00000460170 GFI1BQ5VTD9 330 aa12.16□□□□□ -0.46
PTPRU-205ENST00000460170 FAM53AQ6NSI3 398 aaPredicted RBP12.16□□□□□ -0.46
PTPRU-205ENST00000460170 SPSB3Q6PJ21 355 aa12.16□□□□□ -0.46
PTPRU-205ENST00000460170 C14orf144Q96I85 54 aa12.16□□□□□ -0.46
PTPRU-205ENST00000460170 CCL19Q99731 98 aa12.16□□□□□ -0.46
PTPRU-205ENST00000460170 TRAV5A0A0B4J249 113 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 TMEM178BH3BS89 294 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 FOXL1Q12952 345 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 GNB1LQ9BYB4 327 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 PARD6GQ9BYG4 376 aaPredicted RBP12.15□□□□□ -0.46
PTPRU-205ENST00000460170 GCSHP23434 173 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 NTF4P34130 210 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 CDKN1AP38936 164 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 PRDM13Q9H4Q3 707 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 FAM169BQ8N8A8 192 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 ZNF414Q96IQ9 312 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 DMRTA2Q96SC8 542 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 DERL1Q9BUN8 251 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 PCNX1Q96RV3 2341 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 MUC21A0A0G2JKD1 596 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 MUC21A0A140T8X8 626 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 WIPF3A6NGB9 483 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 C19orf67A6NJJ6 358 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 MUC21Q5SSG8 566 aa12.15□□□□□ -0.46
PTPRU-205ENST00000460170 PLXNB3Q9ULL4 1909 aa12.15□□□□□ -0.47
PTPRU-205ENST00000460170 PMCHL2Q9BQD1 86 aa12.14□□□□□ -0.47
PTPRU-205ENST00000460170 SSBP4Q9BWG4 385 aaPredicted RBP12.14□□□□□ -0.47
PTPRU-205ENST00000460170 KLK15Q9H2R5 256 aa12.14□□□□□ -0.47
PTPRU-205ENST00000460170 Q6ZS92 163 aa12.14□□□□□ -0.47
PTPRU-205ENST00000460170 FBLL1A6NHQ2 334 aaKnown RBP12.14□□□□□ -0.47
PTPRU-205ENST00000460170 IGHV1-8P0DP01 117 aa12.14□□□□□ -0.47
PTPRU-205ENST00000460170 PRSS8Q16651 343 aa12.14□□□□□ -0.47
PTPRU-205ENST00000460170 ZNF474Q6S9Z5 364 aaPredicted RBP12.14□□□□□ -0.47
PTPRU-205ENST00000460170 CLEC19AQ6UXS0 136 aa12.14□□□□□ -0.47
PTPRU-205ENST00000460170 TMEM167AQ8TBQ9 72 aa12.14□□□□□ -0.47
PTPRU-205ENST00000460170 NDUFAF3Q9BU61 184 aa12.14□□□□□ -0.47
PTPRU-205ENST00000460170 C7orf71A4D174 169 aa12.14□□□□□ -0.47
PTPRU-205ENST00000460170 IGLV3-1P01715 115 aa12.14□□□□□ -0.47
PTPRU-205ENST00000460170 GAFA1Q96PS6 74 aa12.14□□□□□ -0.47
PTPRU-205ENST00000460170 TMEM238LA0A1B0GVL6 79 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 A6NJY4 79 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 C9JCJ5 164 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 FABP2P12104 132 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 FER1L6-AS1Q8NA97 138 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 CADP27708 2225 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 IGHV2-26A0A0B4J1V2 119 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 FAM90A2PQ658T7 463 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 FAM159AQ6UWV7 190 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 SLC25A48Q6ZT89 311 aaKnown RBP12.13□□□□□ -0.47
PTPRU-205ENST00000460170 C8orf46Q8TAG6 207 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 AMBPP02760 352 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 LMO1P25800 156 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 TSPOP30536 169 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 NUP37Q8NFH4 326 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 TMEM50AO95807 157 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 ZNF672Q499Z4 452 aaPredicted RBP12.13□□□□□ -0.47
PTPRU-205ENST00000460170 ORMDL3Q8N138 153 aa12.13□□□□□ -0.47
PTPRU-205ENST00000460170 CA1P00915 261 aaPredicted RBP12.12□□□□□ -0.47
PTPRU-205ENST00000460170 DDB2Q92466 427 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 NUP210Q8TEM1 1887 aaPredicted RBP12.12□□□□□ -0.47
PTPRU-205ENST00000460170 ZNF324O75467 553 aaPredicted RBP12.12□□□□□ -0.47
PTPRU-205ENST00000460170 THBDP07204 575 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 MYOD1P15172 320 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 RAB37Q96AX2 223 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 MIEN1Q9BRT3 115 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 A0A0G2JLM5 398 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 NPIPB6E9PJ23 425 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 AREGP15514 252 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 SNRPD3P62318 126 aaKnown RBP12.12□□□□□ -0.47
PTPRU-205ENST00000460170 DNLZQ5SXM8 178 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 TSKUQ8WUA8 353 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 C18orf15Q96N68 181 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 PSG8Q9UQ74 426 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 H0YJW9 148 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 CYB5R2Q6BCY4 276 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 RNF166Q96A37 237 aaPredicted RBP12.12□□□□□ -0.47
PTPRU-205ENST00000460170 RAXQ9Y2V3 346 aa12.12□□□□□ -0.47
PTPRU-205ENST00000460170 F11RQ9Y624 299 aaKnown RBP12.12□□□□□ -0.47
PTPRU-205ENST00000460170 A0A0G2JNJ9 132 aa12.11□□□□□ -0.47
PTPRU-205ENST00000460170 FAM168AQ92567 244 aa12.11□□□□□ -0.47
PTPRU-205ENST00000460170 HIST1H4GQ99525 98 aa12.11□□□□□ -0.47
PTPRU-205ENST00000460170 Q9UFV3 132 aa12.11□□□□□ -0.47
PTPRU-205ENST00000460170 M0R381 172 aa12.11□□□□□ -0.47
PTPRU-205ENST00000460170 SMIM12Q96EX1 92 aa12.11□□□□□ -0.47
PTPRU-205ENST00000460170 KIR2DL4Q99706 377 aa12.11□□□□□ -0.47
PTPRU-205ENST00000460170 ZNF503-AS2A6NEH8 195 aa12.1□□□□□ -0.47
PTPRU-205ENST00000460170 FABP5P3A8MUU1 101 aa12.1□□□□□ -0.47
PTPRU-205ENST00000460170 PAX9P55771 341 aa12.1□□□□□ -0.47
PTPRU-205ENST00000460170 OR10J3Q5JRS4 329 aa12.1□□□□□ -0.47
PTPRU-205ENST00000460170 A1L4Q6 167 aa12.1□□□□□ -0.47
PTPRU-205ENST00000460170 FAM74A4Q5TZK3 123 aa12.1□□□□□ -0.47
PTPRU-205ENST00000460170 ZNF600Q6ZNG1 722 aa12.1□□□□□ -0.47
PTPRU-205ENST00000460170 NUDT10Q8NFP7 164 aa12.1□□□□□ -0.47
PTPRU-205ENST00000460170 NUDT11Q96G61 164 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 106.4 ms