RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 SLC25A4P12235 298 aa12□□□□□ -0.49
COL7A1-203ENST00000459756 ASAH1Q13510 395 aa12□□□□□ -0.49
COL7A1-203ENST00000459756 MLANAQ16655 118 aa12□□□□□ -0.49
COL7A1-203ENST00000459756 ODF3L2Q3SX64 289 aa12□□□□□ -0.49
COL7A1-203ENST00000459756 C4orf46Q504U0 113 aa12□□□□□ -0.49
COL7A1-203ENST00000459756 CASC10Q5T4H9 136 aa12□□□□□ -0.49
COL7A1-203ENST00000459756 ENKURQ8TC29 256 aa12□□□□□ -0.49
COL7A1-203ENST00000459756 HSPB7Q9UBY9 170 aa12□□□□□ -0.49
COL7A1-203ENST00000459756 UBQLN2Q9UHD9 624 aa12□□□□□ -0.49
COL7A1-203ENST00000459756 TCRBP04435 133 aa11.99□□□□□ -0.49
COL7A1-203ENST00000459756 NPY1RP25929 384 aa11.99□□□□□ -0.49
COL7A1-203ENST00000459756 CMC4P56277 68 aaPredicted RBP11.99□□□□□ -0.49
COL7A1-203ENST00000459756 FAM90A2PQ658T7 463 aa11.99□□□□□ -0.49
COL7A1-203ENST00000459756 ETFRF1Q6IPR1 90 aa11.99□□□□□ -0.49
COL7A1-203ENST00000459756 VSIRQ9H7M9 311 aa11.99□□□□□ -0.49
COL7A1-203ENST00000459756 NUDT15Q9NV35 164 aa11.99□□□□□ -0.49
COL7A1-203ENST00000459756 U3KQ87 197 aa11.99□□□□□ -0.49
COL7A1-203ENST00000459756 IGHV3OR16-13A0A075B7E8 117 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 IGHV3-74A0A0B4J1X5 117 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 IGKV1-17P01599 117 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 OR4E1P0C645 316 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 NPPCP23582 126 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 PAFAH1B2P68402 229 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 PRSS54Q6PEW0 395 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 TCF24Q7RTU0 167 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 LRTM2Q8N967 370 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 OR1S2Q8NGQ3 325 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 OR1S1Q8NH92 325 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 DTD1Q8TEA8 209 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 TMEM170AQ8WVE7 144 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 ST8SIA2Q92186 375 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 TMEM231Q9H6L2 316 aa11.98□□□□□ -0.49
COL7A1-203ENST00000459756 C9orf170A2RU37 121 aa11.97□□□□□ -0.49
COL7A1-203ENST00000459756 IFNA10P01566 189 aa11.97□□□□□ -0.49
COL7A1-203ENST00000459756 RND2P52198 227 aa11.97□□□□□ -0.49
COL7A1-203ENST00000459756 APOC4P55056 127 aa11.97□□□□□ -0.49
COL7A1-203ENST00000459756 ATP5IP56385 69 aaPredicted RBP11.97□□□□□ -0.49
COL7A1-203ENST00000459756 DEFA1P59665 94 aa11.97□□□□□ -0.49
COL7A1-203ENST00000459756 DEFA3P59666 94 aa11.97□□□□□ -0.49
COL7A1-203ENST00000459756 UBE2MP61081 183 aaKnown RBP11.97□□□□□ -0.49
COL7A1-203ENST00000459756 TIGITQ495A1 244 aa11.97□□□□□ -0.49
COL7A1-203ENST00000459756 METTL26Q96S19 204 aa11.97□□□□□ -0.49
COL7A1-203ENST00000459756 RBKSQ9H477 322 aa11.97□□□□□ -0.49
COL7A1-203ENST00000459756 A0A1W2PS18 150 aa11.96□□□□□ -0.49
COL7A1-203ENST00000459756 APOHP02749 345 aaPredicted RBP11.96□□□□□ -0.49
COL7A1-203ENST00000459756 HOXB5P09067 269 aa11.96□□□□□ -0.49
COL7A1-203ENST00000459756 H2AFB2P0C5Z0 115 aa11.96□□□□□ -0.49
COL7A1-203ENST00000459756 IGLC1P0CG04 106 aa11.96□□□□□ -0.49
COL7A1-203ENST00000459756 SLC25A6P12236 298 aa11.96□□□□□ -0.49
COL7A1-203ENST00000459756 OR10J1P30954 320 aa11.96□□□□□ -0.49
COL7A1-203ENST00000459756 DHRS2Q13268 280 aa11.96□□□□□ -0.49
COL7A1-203ENST00000459756 LYG2Q86SG7 212 aa11.96□□□□□ -0.49
COL7A1-203ENST00000459756 TMED3Q9Y3Q3 217 aa11.96□□□□□ -0.49
COL7A1-203ENST00000459756 IGKV3-7A0A075B6H7 116 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 TRAV2A0A0B4J234 112 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 KIR2DL5BA0A0G2JN68 375 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 KIR2DL5BA0A0G2JPC4 375 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 UBE2CO00762 179 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 PITX3O75364 302 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 CRYBB3P26998 211 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 TFPI2P48307 235 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 YPEL3P61236 119 aaPredicted RBP11.95□□□□□ -0.5
COL7A1-203ENST00000459756 NRARPQ7Z6K4 114 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 KIR2DL5AQ8N109 375 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 LILRB2Q8N423 598 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 GBGT1Q8N5D6 347 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 KIR2DL5BQ8NHK3 375 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 COQ8AQ8NI60 647 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 Q8WTZ3 238 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 NARS2Q96I59 477 aaKnown RBP11.95□□□□□ -0.5
COL7A1-203ENST00000459756 SEC22CQ9BRL7 303 aa11.95□□□□□ -0.5
COL7A1-203ENST00000459756 IGHV3-66A0A0C4DH42 116 aa11.94□□□□□ -0.5
COL7A1-203ENST00000459756 FAM90A26D6RGX4 464 aa11.94□□□□□ -0.5
COL7A1-203ENST00000459756 DFFBO76075 338 aa11.94□□□□□ -0.5
COL7A1-203ENST00000459756 RPL11P62913 178 aaKnown RBP11.94□□□□□ -0.5
COL7A1-203ENST00000459756 Q6ZWC4 215 aa11.94□□□□□ -0.5
COL7A1-203ENST00000459756 IL17DQ8TAD2 202 aa11.94□□□□□ -0.5
COL7A1-203ENST00000459756 NPIPB3Q92617 1050 aa11.94□□□□□ -0.5
COL7A1-203ENST00000459756 ACY3Q96HD9 319 aa11.94□□□□□ -0.5
COL7A1-203ENST00000459756 GRAMD2BQ96HH9 432 aa11.94□□□□□ -0.5
COL7A1-203ENST00000459756 OVOL2Q9BRP0 275 aa11.94□□□□□ -0.5
COL7A1-203ENST00000459756 MS4A6AQ9H2W1 248 aa11.94□□□□□ -0.5
COL7A1-203ENST00000459756 TP53TG1Q9Y2A0 90 aa11.94□□□□□ -0.5
COL7A1-203ENST00000459756 CSMD3Q7Z407 3707 aa11.94□□□□□ -0.5
COL7A1-203ENST00000459756 DNASE2O00115 360 aaPredicted RBP11.93□□□□□ -0.5
COL7A1-203ENST00000459756 ADAP1O75689 374 aa11.93□□□□□ -0.5
COL7A1-203ENST00000459756 IFNA4P05014 189 aa11.93□□□□□ -0.5
COL7A1-203ENST00000459756 ZFAND6Q6FIF0 208 aa11.93□□□□□ -0.5
COL7A1-203ENST00000459756 APRG1Q8IVJ8 170 aa11.93□□□□□ -0.5
COL7A1-203ENST00000459756 STPG3Q8N7X2 389 aa11.93□□□□□ -0.5
COL7A1-203ENST00000459756 RYR3Q15413 4870 aa11.92□□□□□ -0.5
COL7A1-203ENST00000459756 MED6O75586 246 aa11.92□□□□□ -0.5
COL7A1-203ENST00000459756 RPL35AP18077 110 aaKnown RBP11.92□□□□□ -0.5
COL7A1-203ENST00000459756 GPX4P36969 197 aaPredicted RBP11.92□□□□□ -0.5
COL7A1-203ENST00000459756 P2RY1P47900 373 aa11.92□□□□□ -0.5
COL7A1-203ENST00000459756 GGNBP1Q5YKI7 109 aa11.92□□□□□ -0.5
COL7A1-203ENST00000459756 WFDC3Q8IUB2 231 aa11.92□□□□□ -0.5
COL7A1-203ENST00000459756 MAP6D1Q9H9H5 199 aa11.92□□□□□ -0.5
COL7A1-203ENST00000459756 U3KQE9 123 aa11.92□□□□□ -0.5
COL7A1-203ENST00000459756 SPRY2O43597 315 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms