RNA–Protein interactions for RNA: ENST00000459274.1

RNU1-88P-201, Transcript of RNA, U1 small nuclear 88, pseudogene, humanhuman

BASIC

Gene RNU1-88P, Length 128 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU1-88P-201ENST00000459274 E7EUB6 86 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 G3V318 75 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 CLDN34H7C241 214 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 M0QZ24 198 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR7C2O60412 319 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 FSHBP01225 129 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 CLEC3BP05452 202 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 FAM157CP0CG43 387 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 NPPCP23582 126 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 ARL3P36405 182 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 CRIP2P52943 208 aaPredicted RBP4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 LYZP61626 148 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 BLCAPP62952 87 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 ARL16Q0P5N6 197 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 MIC13Q5XKP0 118 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 LCN15Q6UWW0 184 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 ZNF600Q6ZNG1 722 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 PQLC2Q6ZP29 291 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR4F17Q8NGA8 305 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR4F5Q8NH21 305 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 PIFOQ8TCI5 191 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 ZNF48Q96MX3 618 aaPredicted RBP4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 UHRF2Q96PU4 802 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR4F4Q96R69 305 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 METTL26Q96S19 204 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 TXNDC17Q9BRA2 123 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 GGTLC1Q9BX51 225 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 NKX6-2Q9C056 277 aaPredicted RBP4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 MAP1LC3BQ9GZQ8 125 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 SH3BGRL3Q9H299 93 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 TMEM231Q9H6L2 316 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 MANBALQ9NQG1 85 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 TMEM167BQ9NRX6 74 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 RABAC1Q9UI14 185 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 USP9YO00507 2555 aaPredicted RBP4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 ABCA2Q9BZC7 2435 aa4.6□□□□□ -1.67
RNU1-88P-201ENST00000459274 LAMA5O15230 3695 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 ZNF320A2RRD8 509 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 RBFOX3A6NFN3 312 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 OR2T8A6NH00 312 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 SH2D7A6NKC9 451 aaPredicted RBP4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 CGB1A6NKQ9 187 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 KRBOX1C9JBD0 128 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 I3L2K1 104 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 K7EQM0 130 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 KALRNO60229 2985 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 GGCTO75223 188 aaKnown RBP4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 NDUFB8O95169 186 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 BRI3O95415 125 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 TOMM40O96008 361 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 IGHV3-48P01763 117 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 IL4P05112 153 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 C8orf88P0DMB2 117 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 ZP3P21754 424 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 FOXE3Q13461 319 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 MLANAQ16655 118 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 RPEL1Q2QD12 228 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 CST9LP1Q5W188 147 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 CLEC19AQ6UXS0 136 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 LINC00305Q7Z4B0 112 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 HAPLN4Q86UW8 402 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 BPIFA4PQ86YQ2 179 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 THAP8Q8NA92 274 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 RAB24Q969Q5 203 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 RNF125Q96EQ8 232 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 GPR82Q96P67 336 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 DUX5Q96PT3 197 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 MGST2Q99735 147 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 ELOVL1Q9BW60 279 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 AAMDCQ9H7C9 122 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 SLC25A22Q9H936 323 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 RPRMQ9NS64 109 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 MED9Q9NWA0 146 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 GNG13Q9P2W3 67 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 LINC00527Q9UJ94 153 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 FUT9Q9Y231 359 aa4.59□□□□□ -1.67
RNU1-88P-201ENST00000459274 TRBV9A0A0B4J1U6 114 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 TRAV1-1A0A0B4J248 108 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 A0A1B0GV50 99 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 LINC00862A6NCI5 91 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 PRSS46E5RG02 174 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 I3L521 148 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 IGHG4P01861 327 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 CD5P06127 495 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 RNASE1P07998 156 aaKnown RBP4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 NMBP08949 121 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 PSG1P11464 419 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 RPL7P18124 248 aaKnown RBP4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 ATF4P18848 351 aaPredicted RBP4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 FCGR2BP31994 310 aaPredicted RBP4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 GPR183P32249 361 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 CSN1S1P47710 185 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 MEOX2P50222 304 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 HILS1P60008 231 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 RPL11P62913 178 aaKnown RBP4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 MRGPRG-AS1Q2M3A8 158 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 TIGITQ495A1 244 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 Q71RC1 249 aaPredicted RBP4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 OR8I2Q8N0Y5 310 aa4.58□□□□□ -1.68
RNU1-88P-201ENST00000459274 KLHDC1Q8N7A1 406 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms