RNA–Protein interactions for RNA: ENST00000456581.1

LINC00959-201, Transcript of HCG1648656, isoform CRA_a, humanhuman

TSL 2

Gene LINC00959, Length 2,843 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00959-201ENST00000456581 A0A1W2PS18 150 aa10.04□□□□□ -0.8
LINC00959-201ENST00000456581 IGLV2-8P01709 118 aa10.04□□□□□ -0.8
LINC00959-201ENST00000456581 RPLP1P05386 114 aaKnown RBP10.04□□□□□ -0.8
LINC00959-201ENST00000456581 GPX1P07203 203 aa10.04□□□□□ -0.8
LINC00959-201ENST00000456581 CA7P43166 264 aa10.04□□□□□ -0.8
LINC00959-201ENST00000456581 KIR3DL3Q8N743 410 aa10.04□□□□□ -0.8
LINC00959-201ENST00000456581 SSBP4Q9BWG4 385 aaPredicted RBP10.04□□□□□ -0.8
LINC00959-201ENST00000456581 NRN1Q9NPD7 142 aa10.04□□□□□ -0.8
LINC00959-201ENST00000456581 SLC45A2Q9UMX9 530 aa10.04□□□□□ -0.8
LINC00959-201ENST00000456581 PPIAL4EA0A075B759 164 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 SH2D7A6NKC9 451 aaPredicted RBP10.03□□□□□ -0.8
LINC00959-201ENST00000456581 PPIAL4DF5H284 164 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 M0QZ24 198 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 CT45A6P0DMU7 189 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 CT45A5P0DMU8 189 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 CT45A7P0DMV0 189 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 PPIAL4FP0DN26 164 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 RAB7AP51149 207 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 PRR27Q6MZM9 219 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 TMEM136Q6ZRR5 245 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 ZNF439Q8NDP4 499 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 PLEKHA3Q9HB20 300 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 FOXA2Q9Y261 457 aaPredicted RBP10.03□□□□□ -0.8
LINC00959-201ENST00000456581 UTP20O75691 2785 aaKnown RBP10.03□□□□□ -0.8
LINC00959-201ENST00000456581 DIRC3C9JPN6 131 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 NDUFB8O95169 186 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 CHRNB4P30926 498 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 ADORA2A-AS1P86434 159 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 SLAQ13239 276 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 GDF5OSQ5U4N7 250 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 TMEM200BQ69YZ2 307 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 SIGLECL1Q8N7X8 197 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 C11orf52Q96A22 123 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 CRYBG3Q68DQ2 2970 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 MYO18BQ8IUG5 2567 aa10.03□□□□□ -0.8
LINC00959-201ENST00000456581 TEX50A0A1B0GTY4 177 aa10.02□□□□□ -0.8
LINC00959-201ENST00000456581 NKX6-3A6NJ46 265 aa10.02□□□□□ -0.8
LINC00959-201ENST00000456581 H3BTX0 84 aa10.02□□□□□ -0.8
LINC00959-201ENST00000456581 BMPR1BO00238 502 aa10.02□□□□□ -0.8
LINC00959-201ENST00000456581 TCF21O43680 179 aa10.02□□□□□ -0.8
LINC00959-201ENST00000456581 ZNF253O75346 499 aa10.02□□□□□ -0.8
LINC00959-201ENST00000456581 REG1AP05451 166 aa10.02□□□□□ -0.8
LINC00959-201ENST00000456581 SAA1P0DJI8 122 aaPredicted RBP10.02□□□□□ -0.8
LINC00959-201ENST00000456581 KLRB1Q12918 225 aa10.02□□□□□ -0.8
LINC00959-201ENST00000456581 SPATA12Q7Z6I5 190 aa10.02□□□□□ -0.8
LINC00959-201ENST00000456581 CORTO00230 105 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 CD3EP07766 207 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 GNG5P63218 68 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 PMCHL1Q16048 86 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 IBA57Q5T440 356 aaKnown RBP10.02□□□□□ -0.81
LINC00959-201ENST00000456581 NIT1Q86X76 327 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 MCRIP2Q9BUT9 160 aaKnown RBP10.02□□□□□ -0.81
LINC00959-201ENST00000456581 RAB9BQ9NP90 201 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 ZNF355PQ9NSJ1 428 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 MRPL36Q9P0J6 103 aaKnown RBP10.02□□□□□ -0.81
LINC00959-201ENST00000456581 RPUSD1Q9UJJ7 312 aaKnown RBP10.02□□□□□ -0.81
LINC00959-201ENST00000456581 CELSR1Q9NYQ6 3014 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 ZFHX3Q15911 3703 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 IGHV3-21A0A0B4J1V1 117 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 hADV38S2A0JD32 116 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 FAM90A9PA6NNJ1 464 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 VSTM5A8MXK1 200 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 C9JCJ5 164 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 C3orf79P0CE67 100 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 AREGP15514 252 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 RAB31Q13636 194 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 SPATA45Q537H7 98 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 ST6GALNAC6Q969X2 333 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 C20orf144Q9BQM9 153 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 CDC42EP3Q9UKI2 254 aa10.02□□□□□ -0.81
LINC00959-201ENST00000456581 CENPEQ02224 2701 aa10.01□□□□□ -0.81
LINC00959-201ENST00000456581 UCNP55089 124 aa10.01□□□□□ -0.81
LINC00959-201ENST00000456581 CX3CL1P78423 397 aa10.01□□□□□ -0.81
LINC00959-201ENST00000456581 TMEM183BQ1AE95 376 aa10.01□□□□□ -0.81
LINC00959-201ENST00000456581 C11orf42Q8N5U0 333 aa10.01□□□□□ -0.81
LINC00959-201ENST00000456581 NCOR1P1Q9H4R4 102 aa10.01□□□□□ -0.81
LINC00959-201ENST00000456581 NGBQ9NPG2 151 aa10.01□□□□□ -0.81
LINC00959-201ENST00000456581 TECRQ9NZ01 308 aaKnown RBP10.01□□□□□ -0.81
LINC00959-201ENST00000456581 RPH3ALQ9UNE2 315 aa10.01□□□□□ -0.81
LINC00959-201ENST00000456581 CBY1Q9Y3M2 126 aa10.01□□□□□ -0.81
LINC00959-201ENST00000456581 VWC2LB2RUY7 222 aa10.01□□□□□ -0.81
LINC00959-201ENST00000456581 RANP62826 216 aaKnown RBP10.01□□□□□ -0.81
LINC00959-201ENST00000456581 PAFAH1B2P68402 229 aa10.01□□□□□ -0.81
LINC00959-201ENST00000456581 TIGITQ495A1 244 aa10.01□□□□□ -0.81
LINC00959-201ENST00000456581 MRPL20Q9BYC9 149 aaKnown RBP10.01□□□□□ -0.81
LINC00959-201ENST00000456581 SLC35D1Q9NTN3 355 aa10.01□□□□□ -0.81
LINC00959-201ENST00000456581 USP9XQ93008 2570 aaPredicted RBP10□□□□□ -0.81
LINC00959-201ENST00000456581 APOBEC3AP31941 199 aaPredicted RBP10□□□□□ -0.81
LINC00959-201ENST00000456581 CTRLP40313 264 aa10□□□□□ -0.81
LINC00959-201ENST00000456581 UBE2L3P68036 154 aaKnown RBP10□□□□□ -0.81
LINC00959-201ENST00000456581 UNQ5815/PRO19632Q6UWF5 114 aa10□□□□□ -0.81
LINC00959-201ENST00000456581 ASCL2Q99929 193 aa10□□□□□ -0.81
LINC00959-201ENST00000456581 SLC25A2Q9BXI2 301 aa10□□□□□ -0.81
LINC00959-201ENST00000456581 IGHV1-69-2A0A0G2JMI3 117 aa10□□□□□ -0.81
LINC00959-201ENST00000456581 MT-CO2P00403 227 aa10□□□□□ -0.81
LINC00959-201ENST00000456581 KIR2DS2P43631 304 aa10□□□□□ -0.81
LINC00959-201ENST00000456581 HINT1P49773 126 aaPredicted RBP10□□□□□ -0.81
LINC00959-201ENST00000456581 CORO2AQ92828 525 aa10□□□□□ -0.81
LINC00959-201ENST00000456581 IGF2BP2-AS1Q96M15 143 aa10□□□□□ -0.81
LINC00959-201ENST00000456581 TXNDC17Q9BRA2 123 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms