RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 APRG1Q8IVJ8 170 aa15.72■□□□□ 0.11
HMGB3-205ENST00000455596 KIR2DL5AQ8N109 375 aa15.72■□□□□ 0.11
HMGB3-205ENST00000455596 OR1S1Q8NH92 325 aa15.72■□□□□ 0.11
HMGB3-205ENST00000455596 KIR2DL5BQ8NHK3 375 aa15.72■□□□□ 0.11
HMGB3-205ENST00000455596 DTD1Q8TEA8 209 aa15.72■□□□□ 0.11
HMGB3-205ENST00000455596 TMEM170AQ8WVE7 144 aa15.72■□□□□ 0.11
HMGB3-205ENST00000455596 SRRQ9GZT4 340 aa15.72■□□□□ 0.11
HMGB3-205ENST00000455596 RBKSQ9H477 322 aa15.72■□□□□ 0.11
HMGB3-205ENST00000455596 U3KQ87 197 aa15.72■□□□□ 0.11
HMGB3-205ENST00000455596 DNASE2O00115 360 aaPredicted RBP15.71■□□□□ 0.11
HMGB3-205ENST00000455596 DFFBO76075 338 aa15.71■□□□□ 0.11
HMGB3-205ENST00000455596 IGLC1P0CG04 106 aa15.71■□□□□ 0.11
HMGB3-205ENST00000455596 RPL35AP18077 110 aaKnown RBP15.71■□□□□ 0.11
HMGB3-205ENST00000455596 CRYBB3P26998 211 aa15.71■□□□□ 0.11
HMGB3-205ENST00000455596 RPL11P62913 178 aaKnown RBP15.71■□□□□ 0.11
HMGB3-205ENST00000455596 WFDC3Q8IUB2 231 aa15.71■□□□□ 0.11
HMGB3-205ENST00000455596 LILRB2Q8N423 598 aa15.71■□□□□ 0.11
HMGB3-205ENST00000455596 STPG3Q8N7X2 389 aa15.71■□□□□ 0.11
HMGB3-205ENST00000455596 NARS2Q96I59 477 aaKnown RBP15.71■□□□□ 0.11
HMGB3-205ENST00000455596 MAP6D1Q9H9H5 199 aa15.71■□□□□ 0.11
HMGB3-205ENST00000455596 TP53TG1Q9Y2A0 90 aa15.71■□□□□ 0.11
HMGB3-205ENST00000455596 NBEAL2Q6ZNJ1 2754 aa15.71■□□□□ 0.11
HMGB3-205ENST00000455596 OR10J1P30954 320 aa15.7■□□□□ 0.1
HMGB3-205ENST00000455596 INPP1P49441 399 aa15.7■□□□□ 0.1
HMGB3-205ENST00000455596 YPEL3P61236 119 aaPredicted RBP15.7■□□□□ 0.1
HMGB3-205ENST00000455596 DEFB135Q30KP9 77 aa15.7■□□□□ 0.1
HMGB3-205ENST00000455596 LRTM2Q8N967 370 aa15.7■□□□□ 0.1
HMGB3-205ENST00000455596 Q8WTZ3 238 aa15.7■□□□□ 0.1
HMGB3-205ENST00000455596 MS4A6AQ9H2W1 248 aa15.7■□□□□ 0.1
HMGB3-205ENST00000455596 TRAV2A0A0B4J234 112 aa15.69■□□□□ 0.1
HMGB3-205ENST00000455596 SPRY2O43597 315 aa15.69■□□□□ 0.1
HMGB3-205ENST00000455596 RBMS2Q15434 407 aaKnown RBP15.69■□□□□ 0.1
HMGB3-205ENST00000455596 ZNF124Q15973 351 aa15.69■□□□□ 0.1
HMGB3-205ENST00000455596 CENPSQ8N2Z9 138 aa15.69■□□□□ 0.1
HMGB3-205ENST00000455596 NPIPB3Q92617 1050 aa15.69■□□□□ 0.1
HMGB3-205ENST00000455596 DNAH7Q8WXX0 4024 aa15.68■□□□□ 0.1
HMGB3-205ENST00000455596 SFT2D2O95562 160 aa15.68■□□□□ 0.1
HMGB3-205ENST00000455596 ACY3Q96HD9 319 aa15.68■□□□□ 0.1
HMGB3-205ENST00000455596 GRAMD2BQ96HH9 432 aa15.68■□□□□ 0.1
HMGB3-205ENST00000455596 PITX3O75364 302 aa15.67■□□□□ 0.1
HMGB3-205ENST00000455596 SLC25A6P12236 298 aa15.67■□□□□ 0.1
HMGB3-205ENST00000455596 P2RY1P47900 373 aa15.67■□□□□ 0.1
HMGB3-205ENST00000455596 ATP5IP56385 69 aaPredicted RBP15.67■□□□□ 0.1
HMGB3-205ENST00000455596 PPP1R1AQ13522 171 aa15.67■□□□□ 0.1
HMGB3-205ENST00000455596 TRIQKQ629K1 86 aa15.67■□□□□ 0.1
HMGB3-205ENST00000455596 RABAC1Q9UI14 185 aa15.67■□□□□ 0.1
HMGB3-205ENST00000455596 NAP1L6A6NFF2 107 aa15.66■□□□□ 0.1
HMGB3-205ENST00000455596 IFNA4P05014 189 aa15.66■□□□□ 0.1
HMGB3-205ENST00000455596 HNRNPCP07910 306 aaKnown RBP eCLIP15.66■□□□□ 0.1
HMGB3-205ENST00000455596 BAK1Q16611 211 aa15.66■□□□□ 0.1
HMGB3-205ENST00000455596 RNF183Q96D59 192 aa15.66■□□□□ 0.1
HMGB3-205ENST00000455596 TMED3Q9Y3Q3 217 aa15.66■□□□□ 0.1
HMGB3-205ENST00000455596 LCE6AA0A183 80 aa15.65■□□□□ 0.1
HMGB3-205ENST00000455596 TOMM40O96008 361 aa15.65■□□□□ 0.1
HMGB3-205ENST00000455596 EIF2B2P49770 351 aaKnown RBP15.65■□□□□ 0.1
HMGB3-205ENST00000455596 DEFB131AP59861 70 aa15.65■□□□□ 0.1
HMGB3-205ENST00000455596 UBE2MP61081 183 aaKnown RBP15.65■□□□□ 0.1
HMGB3-205ENST00000455596 STXBP6Q8NFX7 210 aa15.65■□□□□ 0.1
HMGB3-205ENST00000455596 CSTL1Q9H114 145 aa15.65■□□□□ 0.1
HMGB3-205ENST00000455596 U3KQE9 123 aa15.65■□□□□ 0.1
HMGB3-205ENST00000455596 FAM90A26D6RGX4 464 aa15.64■□□□□ 0.09
HMGB3-205ENST00000455596 MED6O75586 246 aa15.64■□□□□ 0.09
HMGB3-205ENST00000455596 IL4P05112 153 aa15.64■□□□□ 0.09
HMGB3-205ENST00000455596 MPTX1A8MV57 137 aa15.63■□□□□ 0.09
HMGB3-205ENST00000455596 K7EQG2 157 aa15.63■□□□□ 0.09
HMGB3-205ENST00000455596 NDUFB6O95139 128 aa15.63■□□□□ 0.09
HMGB3-205ENST00000455596 RD3LP0DJH9 198 aa15.63■□□□□ 0.09
HMGB3-205ENST00000455596 IAPPP10997 89 aa15.63■□□□□ 0.09
HMGB3-205ENST00000455596 GPX4P36969 197 aaPredicted RBP15.63■□□□□ 0.09
HMGB3-205ENST00000455596 RAB11AP62491 216 aa15.63■□□□□ 0.09
HMGB3-205ENST00000455596 USF2Q15853 346 aaPredicted RBP15.63■□□□□ 0.09
HMGB3-205ENST00000455596 LEMD1Q68G75 181 aa15.63■□□□□ 0.09
HMGB3-205ENST00000455596 LYG2Q86SG7 212 aa15.63■□□□□ 0.09
HMGB3-205ENST00000455596 FAM24BQ8N5W8 94 aa15.63■□□□□ 0.09
HMGB3-205ENST00000455596 SLC35E1Q96K37 410 aa15.63■□□□□ 0.09
HMGB3-205ENST00000455596 A0A0J9YWU9 116 aa15.62■□□□□ 0.09
HMGB3-205ENST00000455596 HELTA6NFD8 242 aa15.62■□□□□ 0.09
HMGB3-205ENST00000455596 HOXB5P09067 269 aa15.62■□□□□ 0.09
HMGB3-205ENST00000455596 C16orf54Q6UWD8 224 aa15.62■□□□□ 0.09
HMGB3-205ENST00000455596 SDHCQ99643 169 aaPredicted RBP15.62■□□□□ 0.09
HMGB3-205ENST00000455596 NDUFA13Q9P0J0 144 aa15.62■□□□□ 0.09
HMGB3-205ENST00000455596 CENPXA8MT69 81 aa15.61■□□□□ 0.09
HMGB3-205ENST00000455596 PSG1P11464 419 aa15.61■□□□□ 0.09
HMGB3-205ENST00000455596 AP2S1P53680 142 aaPredicted RBP15.61■□□□□ 0.09
HMGB3-205ENST00000455596 GAMTQ14353 236 aa15.61■□□□□ 0.09
HMGB3-205ENST00000455596 GGNBP1Q5YKI7 109 aa15.61■□□□□ 0.09
HMGB3-205ENST00000455596 OR51G1Q8NGK1 321 aa15.61■□□□□ 0.09
HMGB3-205ENST00000455596 GLMPQ8WWB7 406 aa15.61■□□□□ 0.09
HMGB3-205ENST00000455596 CIB3Q96Q77 187 aaPredicted RBP15.61■□□□□ 0.09
HMGB3-205ENST00000455596 LINC00854A0A1B0GVQ3 168 aa15.6■□□□□ 0.09
HMGB3-205ENST00000455596 C9orf170A2RU37 121 aa15.6■□□□□ 0.09
HMGB3-205ENST00000455596 ZFP92A6NM28 416 aa15.6■□□□□ 0.09
HMGB3-205ENST00000455596 SYNGR2O43760 224 aa15.6■□□□□ 0.09
HMGB3-205ENST00000455596 RPP30P78346 268 aaKnown RBP15.6■□□□□ 0.09
HMGB3-205ENST00000455596 STHQ8IWL8 128 aa15.6■□□□□ 0.09
HMGB3-205ENST00000455596 DCANP1Q8TF63 244 aa15.6■□□□□ 0.09
HMGB3-205ENST00000455596 GATAD1Q8WUU5 269 aa15.6■□□□□ 0.09
HMGB3-205ENST00000455596 C7orf50Q9BRJ6 194 aaKnown RBP15.6■□□□□ 0.09
HMGB3-205ENST00000455596 PAIP2BQ9ULR5 123 aaKnown RBP15.6■□□□□ 0.09
HMGB3-205ENST00000455596 AGRNO00468 2067 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms