RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 HIST1H2BBP33778 126 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 HIST1H2BDP58876 126 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 HIST1H2BCP62807 126 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 FXYD3Q14802 87 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 HIST2H2BEQ16778 126 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.38□□□□□ -0.91
VTA1-203ENST00000452973 ETFRF1Q6IPR1 90 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 C1QL4Q86Z23 238 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 OR1P1Q8NH06 330 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 HIST1H2BHQ93079 126 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 HIST1H2BNQ99877 126 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 HIST1H2BMQ99879 126 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 F11RQ9Y624 299 aaKnown RBP9.38□□□□□ -0.91
VTA1-203ENST00000452973 GGTLC3B5MD39 225 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 H3BTX0 84 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 TRGC1P0CF51 173 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 OR5I1Q13606 314 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 BLNKQ8WV28 456 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 ANAPC16Q96DE5 110 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 TXNDC17Q9BRA2 123 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 PPP5D1E7EU14 171 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 IGHV2-5P01817 119 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 BPIFB3P59826 476 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 CFHR4Q92496 578 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 SFRP2Q96HF1 295 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 FAM167A-AS1Q96KT0 104 aa9.38□□□□□ -0.91
VTA1-203ENST00000452973 PSMB11A5LHX3 300 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 HELTA6NFD8 242 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 TOX4O94842 621 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 ASPHD1Q5U4P2 390 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 PFDN5Q99471 154 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 PAXXQ9BUH6 204 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 C19orf24Q9BVV8 132 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 TRBV24-1A0A075B6N3 115 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 SLC17A3O00476 420 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 UBE2CO00762 179 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 HOXB4P17483 251 aaPredicted RBP9.37□□□□□ -0.91
VTA1-203ENST00000452973 NHLRC2Q8NBF2 726 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 OR1L4Q8NGR5 311 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 OR2T10Q8NGZ9 312 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 LINC00479Q96M42 142 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 RPH3ALQ9UNE2 315 aa9.37□□□□□ -0.91
VTA1-203ENST00000452973 ODF3BA8MYP8 253 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 PRB1P04280 392 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 LYZP61626 148 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 SELENOTP62341 195 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 RANP62826 216 aaKnown RBP9.36□□□□□ -0.91
VTA1-203ENST00000452973 GFI1BQ5VTD9 330 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 SGMS2Q8NHU3 365 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 KLF2Q9Y5W3 355 aaPredicted RBP9.36□□□□□ -0.91
VTA1-203ENST00000452973 USP24Q9UPU5 2620 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 ZNF462Q96JM2 2506 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 IGHV3OR16-10A0A075B7F0 116 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 ZNF98A6NK75 572 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 K7EN84 100 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 GNG4P50150 75 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 CENPWQ5EE01 88 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 THAP8Q8NA92 274 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 SGK494Q96LW2 274 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 MRPL32Q9BYC8 188 aaKnown RBP9.36□□□□□ -0.91
VTA1-203ENST00000452973 OR51M1Q9H341 326 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 DOPEY1Q5JWR5 2465 aa9.36□□□□□ -0.91
VTA1-203ENST00000452973 PRB4P10163 310 aaPredicted RBP9.36□□□□□ -0.91
VTA1-203ENST00000452973 MGST1P10620 155 aaKnown RBP9.36□□□□□ -0.91
VTA1-203ENST00000452973 ZNF320A2RRD8 509 aa9.35□□□□□ -0.91
VTA1-203ENST00000452973 KCNIP4Q6PIL6 250 aa9.35□□□□□ -0.91
VTA1-203ENST00000452973 TMEM116Q8NCL8 245 aa9.35□□□□□ -0.91
VTA1-203ENST00000452973 CELSR2Q9HCU4 2923 aa9.35□□□□□ -0.91
VTA1-203ENST00000452973 CRYGCP07315 174 aa9.35□□□□□ -0.91
VTA1-203ENST00000452973 PSG1P11464 419 aa9.35□□□□□ -0.91
VTA1-203ENST00000452973 ERVFC1-1P60608 527 aa9.35□□□□□ -0.91
VTA1-203ENST00000452973 C5orf64Q2M2E5 130 aa9.35□□□□□ -0.91
VTA1-203ENST00000452973 TIGITQ495A1 244 aa9.35□□□□□ -0.91
VTA1-203ENST00000452973 OR10G8Q8NGN5 311 aa9.35□□□□□ -0.91
VTA1-203ENST00000452973 RNF5Q99942 180 aa9.35□□□□□ -0.91
VTA1-203ENST00000452973 TRAV34A0A0B4J273 112 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 CORTO00230 105 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 IGHV4-39P01824 125 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 TMEM11P17152 192 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 MEOX2P50222 304 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 CX3CL1P78423 397 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 TEX38Q6PEX7 206 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 RASL11BQ9BPW5 248 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 LRRK2Q5S007 2527 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 EPG5Q9HCE0 2579 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 HYPMO75409 117 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 S100A9P06702 114 aaKnown RBP9.34□□□□□ -0.91
VTA1-203ENST00000452973 RNF224P0DH78 156 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 LMO4P61968 165 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 FAM120AOSQ5T036 256 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 CCDC144NLQ6NUI1 221 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 KIR3DL3Q8N743 410 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 RBM14Q96PK6 669 aaKnown RBP9.34□□□□□ -0.91
VTA1-203ENST00000452973 RNF2Q99496 336 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 SIRPDQ9H106 197 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 ZFHX3Q15911 3703 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 POLQO75417 2590 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 IGHV2-70DA0A0C4DH43 119 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 SPINK4O60575 86 aa9.34□□□□□ -0.91
VTA1-203ENST00000452973 IGHV3-23P01764 117 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms