RNA–Protein interactions for RNA: ENST00000449508.1

TOM1-211, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 4

Gene TOM1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-211ENST00000449508 OR51S1Q8NGJ8 323 aa10.04□□□□□ -0.8
TOM1-211ENST00000449508 Q8WTZ3 238 aa10.04□□□□□ -0.8
TOM1-211ENST00000449508 PRRT1Q99946 306 aa10.04□□□□□ -0.8
TOM1-211ENST00000449508 RABL2AQ9UBK7 228 aaPredicted RBP10.04□□□□□ -0.8
TOM1-211ENST00000449508 RSL24D1Q9UHA3 163 aaKnown RBP10.04□□□□□ -0.8
TOM1-211ENST00000449508 RABL2BQ9UNT1 228 aa10.04□□□□□ -0.8
TOM1-211ENST00000449508 BIRC6Q9NR09 4857 aa10.04□□□□□ -0.8
TOM1-211ENST00000449508 H3BMQ9 156 aa10.03□□□□□ -0.8
TOM1-211ENST00000449508 K7EQG2 157 aa10.03□□□□□ -0.8
TOM1-211ENST00000449508 NXPH3O95157 252 aa10.03□□□□□ -0.8
TOM1-211ENST00000449508 RBMS2Q15434 407 aaKnown RBP10.03□□□□□ -0.8
TOM1-211ENST00000449508 PRSS54Q6PEW0 395 aa10.03□□□□□ -0.8
TOM1-211ENST00000449508 C11orf45Q8TAV5 145 aa10.03□□□□□ -0.8
TOM1-211ENST00000449508 RNASEH2CQ8TDP1 164 aaKnown RBP10.03□□□□□ -0.8
TOM1-211ENST00000449508 GRAMD2BQ96HH9 432 aa10.03□□□□□ -0.8
TOM1-211ENST00000449508 TMEM56-RWDD3S4R434 201 aa10.03□□□□□ -0.8
TOM1-211ENST00000449508 IFNA4P05014 189 aa10.02□□□□□ -0.81
TOM1-211ENST00000449508 IGLC1P0CG04 106 aa10.02□□□□□ -0.81
TOM1-211ENST00000449508 SLC25A4P12235 298 aa10.02□□□□□ -0.81
TOM1-211ENST00000449508 RND2P52198 227 aa10.02□□□□□ -0.81
TOM1-211ENST00000449508 NANOS2P60321 138 aaKnown RBP10.02□□□□□ -0.81
TOM1-211ENST00000449508 ETFRF1Q6IPR1 90 aa10.02□□□□□ -0.81
TOM1-211ENST00000449508 SLC24A4Q8NFF2 622 aa10.02□□□□□ -0.81
TOM1-211ENST00000449508 OR1S2Q8NGQ3 325 aa10.02□□□□□ -0.81
TOM1-211ENST00000449508 DYNC2LI1Q8TCX1 351 aa10.02□□□□□ -0.81
TOM1-211ENST00000449508 SCGB3A2Q96PL1 93 aa10.02□□□□□ -0.81
TOM1-211ENST00000449508 SCP2D1Q9UJQ7 156 aa10.02□□□□□ -0.81
TOM1-211ENST00000449508 ANKRD20A5PA0PJZ0 165 aa10.01□□□□□ -0.81
TOM1-211ENST00000449508 DEFB4AO15263 64 aa10.01□□□□□ -0.81
TOM1-211ENST00000449508 NOL3O60936 208 aaKnown RBP10.01□□□□□ -0.81
TOM1-211ENST00000449508 HNRNPCP07910 306 aaKnown RBP eCLIP10.01□□□□□ -0.81
TOM1-211ENST00000449508 ZNF688P0C7X2 276 aa10.01□□□□□ -0.81
TOM1-211ENST00000449508 SULT1A3P0DMM9 295 aa10.01□□□□□ -0.81
TOM1-211ENST00000449508 SULT1A4P0DMN0 295 aa10.01□□□□□ -0.81
TOM1-211ENST00000449508 OR10J1P30954 320 aa10.01□□□□□ -0.81
TOM1-211ENST00000449508 EIF2B2P49770 351 aaKnown RBP10.01□□□□□ -0.81
TOM1-211ENST00000449508 YPEL3P61236 119 aaPredicted RBP10.01□□□□□ -0.81
TOM1-211ENST00000449508 NOXA1Q86UR1 476 aa10.01□□□□□ -0.81
TOM1-211ENST00000449508 IL22RA2Q969J5 263 aa10.01□□□□□ -0.81
TOM1-211ENST00000449508 MFFQ9GZY8 342 aa10.01□□□□□ -0.81
TOM1-211ENST00000449508 C11orf68Q9H3H3 251 aaKnown RBP10.01□□□□□ -0.81
TOM1-211ENST00000449508 MCUBQ9NWR8 336 aa10.01□□□□□ -0.81
TOM1-211ENST00000449508 PRR13Q9NZ81 148 aa10.01□□□□□ -0.81
TOM1-211ENST00000449508 CCDC59Q9P031 241 aaKnown RBP10.01□□□□□ -0.81
TOM1-211ENST00000449508 FBXL17Q9UF56 701 aa10.01□□□□□ -0.81
TOM1-211ENST00000449508 CACFD1Q9UGQ2 172 aa10.01□□□□□ -0.81
TOM1-211ENST00000449508 U3KQE9 123 aa10.01□□□□□ -0.81
TOM1-211ENST00000449508 HELTA6NFD8 242 aa10□□□□□ -0.81
TOM1-211ENST00000449508 FABP12A6NFH5 140 aa10□□□□□ -0.81
TOM1-211ENST00000449508 KNCNA6PVL3 124 aa10□□□□□ -0.81
TOM1-211ENST00000449508 GSTZ1O43708 216 aaPredicted RBP10□□□□□ -0.81
TOM1-211ENST00000449508 IFNA10P01566 189 aa10□□□□□ -0.81
TOM1-211ENST00000449508 AKR1C4P17516 323 aa10□□□□□ -0.81
TOM1-211ENST00000449508 NPY1RP25929 384 aa10□□□□□ -0.81
TOM1-211ENST00000449508 AP2S1P53680 142 aaPredicted RBP10□□□□□ -0.81
TOM1-211ENST00000449508 DHRS2Q13268 280 aa10□□□□□ -0.81
TOM1-211ENST00000449508 C16orf54Q6UWD8 224 aa10□□□□□ -0.81
TOM1-211ENST00000449508 DCANP1Q8TF63 244 aa10□□□□□ -0.81
TOM1-211ENST00000449508 TMEM170AQ8WVE7 144 aa10□□□□□ -0.81
TOM1-211ENST00000449508 NPIPB3Q92617 1050 aa10□□□□□ -0.81
TOM1-211ENST00000449508 ACY3Q96HD9 319 aa10□□□□□ -0.81
TOM1-211ENST00000449508 IL4P05112 153 aa9.99□□□□□ -0.81
TOM1-211ENST00000449508 TNFSF8P32971 234 aa9.99□□□□□ -0.81
TOM1-211ENST00000449508 CCR6P51684 374 aa9.99□□□□□ -0.81
TOM1-211ENST00000449508 TMEM41BQ5BJD5 291 aa9.99□□□□□ -0.81
TOM1-211ENST00000449508 NMSQ5H8A3 153 aa9.99□□□□□ -0.81
TOM1-211ENST00000449508 MORN3Q6PF18 240 aaPredicted RBP9.99□□□□□ -0.81
TOM1-211ENST00000449508 LYZL2Q7Z4W2 148 aa9.99□□□□□ -0.81
TOM1-211ENST00000449508 TRPT1Q86TN4 253 aaKnown RBP9.99□□□□□ -0.81
TOM1-211ENST00000449508 U3KQ87 197 aa9.99□□□□□ -0.81
TOM1-211ENST00000449508 A0A0B4J2A0 478 aa9.98□□□□□ -0.81
TOM1-211ENST00000449508 GIG44P09565 113 aaPredicted RBP9.98□□□□□ -0.81
TOM1-211ENST00000449508 RD3LP0DJH9 198 aa9.98□□□□□ -0.81
TOM1-211ENST00000449508 SPP1P10451 314 aa9.98□□□□□ -0.81
TOM1-211ENST00000449508 SMCO1Q147U7 214 aa9.98□□□□□ -0.81
TOM1-211ENST00000449508 USF2Q15853 346 aaPredicted RBP9.98□□□□□ -0.81
TOM1-211ENST00000449508 ACTL10Q5JWF8 245 aa9.98□□□□□ -0.81
TOM1-211ENST00000449508 LGALS9CQ6DKI2 356 aa9.98□□□□□ -0.81
TOM1-211ENST00000449508 LGI3Q8N145 548 aa9.98□□□□□ -0.81
TOM1-211ENST00000449508 DTD1Q8TEA8 209 aa9.98□□□□□ -0.81
TOM1-211ENST00000449508 GLMPQ8WWB7 406 aa9.98□□□□□ -0.81
TOM1-211ENST00000449508 SOSTQ9BQB4 213 aa9.98□□□□□ -0.81
TOM1-211ENST00000449508 SLIRPQ9GZT3 109 aaKnown RBP9.98□□□□□ -0.81
TOM1-211ENST00000449508 RBKSQ9H477 322 aa9.98□□□□□ -0.81
TOM1-211ENST00000449508 SHPKQ9UHJ6 478 aa9.98□□□□□ -0.81
TOM1-211ENST00000449508 CCDC160A6NGH7 325 aa9.97□□□□□ -0.81
TOM1-211ENST00000449508 TOMM40O96008 361 aa9.97□□□□□ -0.81
TOM1-211ENST00000449508 PSG1P11464 419 aa9.97□□□□□ -0.81
TOM1-211ENST00000449508 ANXA3P12429 323 aa9.97□□□□□ -0.81
TOM1-211ENST00000449508 SUPT4H1P63272 117 aaKnown RBP9.97□□□□□ -0.81
TOM1-211ENST00000449508 PSMG4Q5JS54 123 aa9.97□□□□□ -0.81
TOM1-211ENST00000449508 RPP25LQ8N5L8 163 aaKnown RBP9.97□□□□□ -0.81
TOM1-211ENST00000449508 OR1S1Q8NH92 325 aa9.97□□□□□ -0.81
TOM1-211ENST00000449508 MCFD2Q8NI22 146 aa9.97□□□□□ -0.81
TOM1-211ENST00000449508 C2CD4CQ8TF44 421 aa9.97□□□□□ -0.81
TOM1-211ENST00000449508 RAB40CQ96S21 281 aa9.97□□□□□ -0.81
TOM1-211ENST00000449508 HSPB7Q9UBY9 170 aa9.97□□□□□ -0.81
TOM1-211ENST00000449508 IGHV4-28A0A0C4DH34 117 aa9.96□□□□□ -0.82
TOM1-211ENST00000449508 BUB3O43684 328 aa9.96□□□□□ -0.82
TOM1-211ENST00000449508 KLF9Q13886 244 aaPredicted RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms