RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 CAMLGP49069 296 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 KIAA0141Q14154 515 aaPredicted RBP11.33□□□□□ -0.6
TNF-208ENST00000449264 KRTAP24-1Q3LI83 254 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 TIGITQ495A1 244 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 ZNF491Q8N8L2 437 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 THAP8Q8NA92 274 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 MYOZ3Q8TDC0 251 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 ST8SIA2Q92186 375 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 SH3BGRL3Q9H299 93 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 RFNGQ9Y644 331 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 IGKV1D-37A0A075B6S9 117 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 A0A1B0GUS0 222 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 AGPAT2O15120 278 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 MPDU1O75352 247 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 CLEC3BP05452 202 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 IGLC1P0CG04 106 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 ATP6V0CP27449 155 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 EIF5AP63241 154 aaKnown RBP11.33□□□□□ -0.6
TNF-208ENST00000449264 ZNF90Q03938 601 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 FOXL1Q12952 345 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 RAB31Q13636 194 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 ZNF709Q8N972 641 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 STOML3Q8TAV4 291 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 GGTLC1Q9BX51 225 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 PARD6GQ9BYG4 376 aaPredicted RBP11.33□□□□□ -0.6
TNF-208ENST00000449264 TENM1Q9UKZ4 2725 aa11.33□□□□□ -0.6
TNF-208ENST00000449264 TCRBV4S1A1TA0A5B7 111 aa11.32□□□□□ -0.6
TNF-208ENST00000449264 TRBV12-3P01733 135 aa11.32□□□□□ -0.6
TNF-208ENST00000449264 FCGR2BP31994 310 aaPredicted RBP11.32□□□□□ -0.6
TNF-208ENST00000449264 C18orf65Q6ZTR6 163 aa11.32□□□□□ -0.6
TNF-208ENST00000449264 BAP18Q8IXM2 172 aa11.32□□□□□ -0.6
TNF-208ENST00000449264 UBE2E2Q96LR5 201 aa11.32□□□□□ -0.6
TNF-208ENST00000449264 TXN2Q99757 166 aa11.32□□□□□ -0.6
TNF-208ENST00000449264 GINS3Q9BRX5 216 aa11.32□□□□□ -0.6
TNF-208ENST00000449264 CHRDL1Q9BU40 450 aa11.32□□□□□ -0.6
TNF-208ENST00000449264 SLC25A32Q9H2D1 315 aa11.32□□□□□ -0.6
TNF-208ENST00000449264 IGHV3-35A0A0C4DH35 117 aa11.31□□□□□ -0.6
TNF-208ENST00000449264 A0A1W2PRX2 142 aa11.31□□□□□ -0.6
TNF-208ENST00000449264 C17orf112F2Z3M2 114 aa11.31□□□□□ -0.6
TNF-208ENST00000449264 NUPL2O15504 423 aaKnown RBP11.31□□□□□ -0.6
TNF-208ENST00000449264 TGOLN2O43493 480 aa11.31□□□□□ -0.6
TNF-208ENST00000449264 SCGB2A1O75556 95 aa11.31□□□□□ -0.6
TNF-208ENST00000449264 IGKV1-17P01599 117 aa11.31□□□□□ -0.6
TNF-208ENST00000449264 GATA2P23769 480 aaPredicted RBP11.31□□□□□ -0.6
TNF-208ENST00000449264 ARL3P36405 182 aa11.31□□□□□ -0.6
TNF-208ENST00000449264 ZNF343Q6P1L6 599 aa11.31□□□□□ -0.6
TNF-208ENST00000449264 CYP2G1PQ6ZSU1 146 aa11.31□□□□□ -0.6
TNF-208ENST00000449264 TRGV9Q99603 122 aa11.31□□□□□ -0.6
TNF-208ENST00000449264 CITED2Q99967 270 aaPredicted RBP11.31□□□□□ -0.6
TNF-208ENST00000449264 GAR1Q9NY12 217 aaKnown RBP11.31□□□□□ -0.6
TNF-208ENST00000449264 TRAV30A0A087WSZ9 112 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP11.3□□□□□ -0.6
TNF-208ENST00000449264 NUDT19A8MXV4 375 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 LGALS1P09382 135 aaKnown RBP11.3□□□□□ -0.6
TNF-208ENST00000449264 ELLP55199 621 aaPredicted RBP11.3□□□□□ -0.6
TNF-208ENST00000449264 AWAT1Q58HT5 328 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 MIC13Q5XKP0 118 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 KLHL30-AS1Q8NEE0 82 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 BPIFCQ8NFQ6 507 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 TMED6Q8WW62 240 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 GNPNAT1Q96EK6 184 aaPredicted RBP11.3□□□□□ -0.6
TNF-208ENST00000449264 ARV1Q9H2C2 271 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 CTSGP08311 255 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 ADMP35318 185 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 KRTAP10-3P60369 221 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 ZNF616Q08AN1 781 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 DEFB136Q30KP8 78 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 TMEM182Q6ZP80 229 aaPredicted RBP11.3□□□□□ -0.6
TNF-208ENST00000449264 STPG3Q8N7X2 389 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 OR2G3Q8NGZ4 309 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 WFDC12Q8WWY7 111 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 C19orf24Q9BVV8 132 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 PEF1Q9UBV8 284 aaKnown RBP11.3□□□□□ -0.6
TNF-208ENST00000449264 PXMP4Q9Y6I8 212 aa11.3□□□□□ -0.6
TNF-208ENST00000449264 CFDP00746 253 aaPredicted RBP11.29□□□□□ -0.6
TNF-208ENST00000449264 CDX1P47902 265 aaPredicted RBP11.29□□□□□ -0.6
TNF-208ENST00000449264 B2MP61769 119 aa11.29□□□□□ -0.6
TNF-208ENST00000449264 ALKAL2Q6UX46 152 aa11.29□□□□□ -0.6
TNF-208ENST00000449264 KCNIP2Q9NS61 270 aa11.29□□□□□ -0.6
TNF-208ENST00000449264 SLC45A2Q9UMX9 530 aa11.29□□□□□ -0.6
TNF-208ENST00000449264 TIMM9Q9Y5J7 89 aa11.29□□□□□ -0.6
TNF-208ENST00000449264 TSSC4Q9Y5U2 329 aaPredicted RBP11.29□□□□□ -0.6
TNF-208ENST00000449264 FBN1P35555 2871 aaKnown RBP11.28□□□□□ -0.6
TNF-208ENST00000449264 BMPR1BO00238 502 aa11.28□□□□□ -0.6
TNF-208ENST00000449264 FABP1P07148 127 aa11.28□□□□□ -0.6
TNF-208ENST00000449264 LINC00869P0C866 280 aa11.28□□□□□ -0.6
TNF-208ENST00000449264 RD3LP0DJH9 198 aa11.28□□□□□ -0.6
TNF-208ENST00000449264 SPP1P10451 314 aa11.28□□□□□ -0.6
TNF-208ENST00000449264 PSG1P11464 419 aa11.28□□□□□ -0.6
TNF-208ENST00000449264 FFAR4Q5NUL3 377 aa11.28□□□□□ -0.6
TNF-208ENST00000449264 SPSB3Q6PJ21 355 aa11.28□□□□□ -0.6
TNF-208ENST00000449264 C8orf86Q6ZUL3 223 aa11.28□□□□□ -0.6
TNF-208ENST00000449264 C4orf3Q8WVX3 66 aa11.28□□□□□ -0.6
TNF-208ENST00000449264 ATP6V0BQ99437 205 aa11.28□□□□□ -0.6
TNF-208ENST00000449264 PSMG3Q9BT73 122 aaPredicted RBP11.28□□□□□ -0.6
TNF-208ENST00000449264 WNK1Q9H4A3 2382 aa11.27□□□□□ -0.6
TNF-208ENST00000449264 IGHV4OR15-8A0A075B7B6 117 aa11.27□□□□□ -0.6
TNF-208ENST00000449264 IGHV3OR16-8A0A075B7F1 116 aa11.27□□□□□ -0.6
TNF-208ENST00000449264 A0A087WW49 117 aa11.27□□□□□ -0.6
TNF-208ENST00000449264 I3L521 148 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms