RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 GAGE12JA6NER3 117 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 GAGE7O76087 117 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 GAGE12FP0CL80 117 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 GAGE12GP0CL81 117 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 GAGE12IP0CL82 117 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 GAGE4Q13068 117 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 TMEM240Q5SV17 173 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.57□□□□□ -1.36
SMG1-202ENST00000446231 TMPRSS3P57727 454 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 LEAP2Q969E1 77 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 RAXQ9Y2V3 346 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 F8W1H4 67 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 NXPH1P58417 271 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 C2orf83Q53S99 150 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 ZNF837Q96EG3 531 aaPredicted RBP6.57□□□□□ -1.36
SMG1-202ENST00000446231 CRISPLD2Q9H0B8 497 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 CALYQ9NYX4 217 aa6.57□□□□□ -1.36
SMG1-202ENST00000446231 STRCQ7RTU9 1775 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 SLC22A18ASQ8N1D0 253 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 TMEM178AQ8NBL3 297 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 KLK15Q9H2R5 256 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 TRAV8-4A0A0B4J246 113 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 K7ERJ3 54 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 Q6AWC8 147 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 PRSS8Q16651 343 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 TREML4Q6UXN2 200 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 TNFAIP6P98066 277 aaPredicted RBP6.56□□□□□ -1.36
SMG1-202ENST00000446231 LINC01559Q495D7 138 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 GTSCR1Q86UQ5 136 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 ZNF501Q96CX3 271 aaPredicted RBP6.56□□□□□ -1.36
SMG1-202ENST00000446231 FADS6Q8N9I5 356 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 C18orf32Q8TCD1 76 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 CLPSP04118 112 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 TRBV6-6A0A0A6YYG2 114 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 MLNRO43193 412 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 LHX2P50458 406 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 CELA2AP08217 269 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 TANC2Q9HCD6 1990 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 HBDP02042 147 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 LIME1Q9H400 295 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 ALPK3Q96L96 1907 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 PHLPP1O60346 1717 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 NPIPB11E5RHQ5 1161 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 KIR3DL3Q8N743 410 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 Q9H3A6 140 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 PLSCR4Q9NRQ2 329 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 TMEM42Q69YG0 159 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 C15orf62A8K5M9 175 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 PPBPP02775 128 aa6.56□□□□□ -1.36
SMG1-202ENST00000446231 A0A1W2PQF6 199 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 LINC00470Q9BZP3 86 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 LOXL2Q9Y4K0 774 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 LRRK2Q5S007 2527 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 ZNF114Q8NC26 417 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 MORN2Q502X0 79 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 TMEM190Q8WZ59 177 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 TOMM40O96008 361 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 IFI27P40305 119 aaPredicted RBP6.55□□□□□ -1.36
SMG1-202ENST00000446231 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.55□□□□□ -1.36
SMG1-202ENST00000446231 GCSAMQ8N6F7 178 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 COQ2Q96H96 371 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 SAA2-SAA4A0A096LPE2 208 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 A0A1W2PPM0 123 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 CIARTQ8N365 385 aaPredicted RBP6.55□□□□□ -1.36
SMG1-202ENST00000446231 ANOS1P23352 680 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 G3V4G9 280 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 FCGR2BP31994 310 aaPredicted RBP6.55□□□□□ -1.36
SMG1-202ENST00000446231 TMEM92Q6UXU6 159 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 Q8NFD4 153 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 SMIM27A0A1W2PRY6 76 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 WIPF3A6NGB9 483 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 ASCL4Q6XD76 172 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 PEAR1Q5VY43 1037 aaPredicted RBP6.55□□□□□ -1.36
SMG1-202ENST00000446231 RNF7Q9UBF6 113 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 CCL13Q99616 98 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 OR9G1Q8NH87 305 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 ZNF714Q96N38 554 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 LGALS7P47929 136 aa6.55□□□□□ -1.36
SMG1-202ENST00000446231 IGLV3-32A0A0A0MS00 114 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 SMAD7O15105 426 aaKnown RBP6.54□□□□□ -1.36
SMG1-202ENST00000446231 SRFP11831 508 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 LOXL3P58215 753 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 ETDBQ3ZM63 59 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 IGLC7A0M8Q6 106 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 COX7A1P24310 79 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 TIMD4Q96H15 378 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 KLHDC3Q9BQ90 382 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 IGKCP01834 107 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 DNASE2BQ8WZ79 361 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 MUC6Q6W4X9 2439 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 ETV2O00321 342 aaPredicted RBP6.54□□□□□ -1.36
SMG1-202ENST00000446231 PPP1R17O96001 155 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.54□□□□□ -1.36
SMG1-202ENST00000446231 VKORC1Q9BQB6 163 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 SBF2Q86WG5 1849 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 MGPP08493 103 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 SLAQ13239 276 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 SARAFQ96BY9 339 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 YPEL4Q96NS1 127 aa6.54□□□□□ -1.36
SMG1-202ENST00000446231 IGHV4-39P01824 125 aa6.54□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 184 ms