RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 TIMM23O14925 209 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 IGLV1-47P01700 117 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 TMEM37Q8WXS4 190 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 DNAJC4Q9NNZ3 241 aa13.51□□□□□ -0.25
LAPTM4B-201ENST00000445593 PCGF1Q9BSM1 259 aa13.5□□□□□ -0.25
LAPTM4B-201ENST00000445593 B4DEV8 164 aa13.5□□□□□ -0.25
LAPTM4B-201ENST00000445593 MC5RP33032 325 aa13.5□□□□□ -0.25
LAPTM4B-201ENST00000445593 MMDQ15546 238 aa13.5□□□□□ -0.25
LAPTM4B-201ENST00000445593 KCNIP2Q9NS61 270 aa13.5□□□□□ -0.25
LAPTM4B-201ENST00000445593 CSMD2Q7Z408 3487 aa13.49□□□□□ -0.25
LAPTM4B-201ENST00000445593 EPG5Q9HCE0 2579 aa13.49□□□□□ -0.25
LAPTM4B-201ENST00000445593 LIPFP07098 398 aa13.49□□□□□ -0.25
LAPTM4B-201ENST00000445593 ORM2P19652 201 aa13.49□□□□□ -0.25
LAPTM4B-201ENST00000445593 RPL27AP46776 148 aaKnown RBP13.49□□□□□ -0.25
LAPTM4B-201ENST00000445593 FBLN7Q53RD9 439 aa13.49□□□□□ -0.25
LAPTM4B-201ENST00000445593 OR5B12Q96R08 314 aa13.49□□□□□ -0.25
LAPTM4B-201ENST00000445593 H3BTX0 84 aa13.49□□□□□ -0.25
LAPTM4B-201ENST00000445593 PYYP10082 97 aa13.49□□□□□ -0.25
LAPTM4B-201ENST00000445593 LBHQ53QV2 105 aaPredicted RBP13.49□□□□□ -0.25
LAPTM4B-201ENST00000445593 Q6ZVH6 145 aa13.49□□□□□ -0.25
LAPTM4B-201ENST00000445593 SLC25A33Q9BSK2 321 aa13.49□□□□□ -0.25
LAPTM4B-201ENST00000445593 A0A1W2PN81 502 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 CNIH1O95406 144 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 RBX1P62877 108 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 LCN2P80188 198 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 ERASQ7Z444 233 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 OR1L6Q8NGR2 347 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 FRZBQ92765 325 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 FUT9Q9Y231 359 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 HIST1H2BKO60814 126 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 HIST1H2BJP06899 126 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 HIST1H2BOP23527 126 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 HIST1H2BBP33778 126 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 MFAP2P55001 183 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 HIST1H2BDP58876 126 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 HIST1H2BCP62807 126 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 HIST2H2BEQ16778 126 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 MRGPRG-AS1Q2M3A8 158 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 LINC01551Q86U37 167 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 HIST1H2BHQ93079 126 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 HIST1H2BNQ99877 126 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 HIST1H2BMQ99879 126 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 SSBP3Q9BWW4 388 aaPredicted RBP13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 CRYBB3P26998 211 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 PRSS8Q16651 343 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 OR4X1Q8NH49 305 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 SIGLEC9Q9Y336 463 aa13.48□□□□□ -0.25
LAPTM4B-201ENST00000445593 LOC105371242A0A075B767 164 aa13.47□□□□□ -0.25
LAPTM4B-201ENST00000445593 PDE6DO43924 150 aa13.47□□□□□ -0.25
LAPTM4B-201ENST00000445593 CELSR2Q9HCU4 2923 aa13.47□□□□□ -0.25
LAPTM4B-201ENST00000445593 USP9YO00507 2555 aaPredicted RBP13.47□□□□□ -0.25
LAPTM4B-201ENST00000445593 ZNF462Q96JM2 2506 aa13.47□□□□□ -0.25
LAPTM4B-201ENST00000445593 COX7A2P2O60397 106 aa13.47□□□□□ -0.25
LAPTM4B-201ENST00000445593 MT-CO2P00403 227 aa13.47□□□□□ -0.25
LAPTM4B-201ENST00000445593 SUMO1P63165 101 aaKnown RBP13.47□□□□□ -0.25
LAPTM4B-201ENST00000445593 LEMD1Q68G75 181 aa13.47□□□□□ -0.25
LAPTM4B-201ENST00000445593 NHLRC2Q8NBF2 726 aa13.47□□□□□ -0.25
LAPTM4B-201ENST00000445593 IGLC7A0M8Q6 106 aa13.46□□□□□ -0.25
LAPTM4B-201ENST00000445593 F6UZH7 168 aa13.46□□□□□ -0.25
LAPTM4B-201ENST00000445593 TRGC1P0CF51 173 aa13.46□□□□□ -0.25
LAPTM4B-201ENST00000445593 KLF17Q5JT82 389 aaPredicted RBP13.46□□□□□ -0.25
LAPTM4B-201ENST00000445593 PPP1R27Q86WC6 154 aa13.46□□□□□ -0.25
LAPTM4B-201ENST00000445593 OR5AU1Q8NGC0 362 aa13.46□□□□□ -0.25
LAPTM4B-201ENST00000445593 ZNF596Q8TC21 504 aa13.46□□□□□ -0.25
LAPTM4B-201ENST00000445593 ZNF503Q96F45 646 aa13.46□□□□□ -0.25
LAPTM4B-201ENST00000445593 SGK494Q96LW2 274 aa13.46□□□□□ -0.25
LAPTM4B-201ENST00000445593 RPLP1P05386 114 aaKnown RBP13.46□□□□□ -0.25
LAPTM4B-201ENST00000445593 GPR6P46095 362 aaPredicted RBP13.46□□□□□ -0.25
LAPTM4B-201ENST00000445593 ZNF137PP52743 207 aa13.46□□□□□ -0.25
LAPTM4B-201ENST00000445593 HIST3H2BBQ8N257 126 aa13.46□□□□□ -0.25
LAPTM4B-201ENST00000445593 OR1B1Q8NGR6 318 aa13.46□□□□□ -0.25
LAPTM4B-201ENST00000445593 M0QZ24 198 aa13.46□□□□□ -0.26
LAPTM4B-201ENST00000445593 LGALS7P47929 136 aa13.46□□□□□ -0.26
LAPTM4B-201ENST00000445593 SUB1P53999 127 aaKnown RBP eCLIP13.46□□□□□ -0.261e-6■■■■□ 25.6
LAPTM4B-201ENST00000445593 UBE2L3P68036 154 aaKnown RBP13.46□□□□□ -0.26
LAPTM4B-201ENST00000445593 OCC1Q8TAD7 63 aa13.46□□□□□ -0.26
LAPTM4B-201ENST00000445593 SLC17A3O00476 420 aa13.45□□□□□ -0.26
LAPTM4B-201ENST00000445593 HTR1DP28221 377 aa13.45□□□□□ -0.26
LAPTM4B-201ENST00000445593 PMS2P11Q13670 270 aa13.45□□□□□ -0.26
LAPTM4B-201ENST00000445593 C11orf71Q6IPW1 123 aa13.45□□□□□ -0.26
LAPTM4B-201ENST00000445593 C1QL4Q86Z23 238 aa13.45□□□□□ -0.26
LAPTM4B-201ENST00000445593 MMD2Q8IY49 270 aa13.45□□□□□ -0.26
LAPTM4B-201ENST00000445593 MALSU1Q96EH3 234 aa13.45□□□□□ -0.26
LAPTM4B-201ENST00000445593 TECRQ9NZ01 308 aaKnown RBP13.45□□□□□ -0.26
LAPTM4B-201ENST00000445593 ZFP36P26651 326 aaKnown RBP13.45□□□□□ -0.26
LAPTM4B-201ENST00000445593 KIR3DL3Q8N743 410 aa13.45□□□□□ -0.26
LAPTM4B-201ENST00000445593 BLNKQ8WV28 456 aa13.45□□□□□ -0.26
LAPTM4B-201ENST00000445593 PRORYQ9H606 182 aa13.45□□□□□ -0.26
LAPTM4B-201ENST00000445593 ZNF355PQ9NSJ1 428 aa13.45□□□□□ -0.26
LAPTM4B-201ENST00000445593 SRSF12Q8WXF0 261 aaKnown RBP13.44□□□□□ -0.26
LAPTM4B-201ENST00000445593 LINC00479Q96M42 142 aa13.44□□□□□ -0.26
LAPTM4B-201ENST00000445593 CSPG4Q6UVK1 2322 aa13.44□□□□□ -0.26
LAPTM4B-201ENST00000445593 SPINK4O60575 86 aa13.44□□□□□ -0.26
LAPTM4B-201ENST00000445593 PTTG1IPP53801 180 aa13.44□□□□□ -0.26
LAPTM4B-201ENST00000445593 FAM71F2Q6NXP2 309 aa13.44□□□□□ -0.26
LAPTM4B-201ENST00000445593 C8orf31Q8N9H6 132 aa13.44□□□□□ -0.26
LAPTM4B-201ENST00000445593 MDFIC2A0A1B0GVS7 189 aa13.44□□□□□ -0.26
LAPTM4B-201ENST00000445593 TOX4O94842 621 aa13.44□□□□□ -0.26
LAPTM4B-201ENST00000445593 GOSR1O95249 250 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms