RNA–Protein interactions for RNA: ENST00000444951.5

LIME1-202, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3

Gene LIME1, Length 451 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-202ENST00000444951 HBG1P69891 147 aa13.24□□□□□ -0.29
LIME1-202ENST00000444951 HBG2P69892 147 aa13.24□□□□□ -0.29
LIME1-202ENST00000444951 DLK1P80370 383 aa13.24□□□□□ -0.29
LIME1-202ENST00000444951 CLINT1Q14677 625 aa13.24□□□□□ -0.29
LIME1-202ENST00000444951 INO80EQ8NBZ0 244 aaPredicted RBP13.24□□□□□ -0.29
LIME1-202ENST00000444951 OR1S2Q8NGQ3 325 aa13.24□□□□□ -0.29
LIME1-202ENST00000444951 OR4X1Q8NH49 305 aa13.24□□□□□ -0.29
LIME1-202ENST00000444951 CACNG8Q8WXS5 425 aa13.24□□□□□ -0.29
LIME1-202ENST00000444951 TXN2Q99757 166 aa13.24□□□□□ -0.29
LIME1-202ENST00000444951 CHRDL1Q9BU40 450 aa13.24□□□□□ -0.29
LIME1-202ENST00000444951 HSPB11Q9Y547 144 aa13.24□□□□□ -0.29
LIME1-202ENST00000444951 LINC01619G3V211 115 aa13.23□□□□□ -0.29
LIME1-202ENST00000444951 BMPR1BO00238 502 aa13.23□□□□□ -0.29
LIME1-202ENST00000444951 TGOLN2O43493 480 aa13.23□□□□□ -0.29
LIME1-202ENST00000444951 OR2C1O95371 312 aa13.23□□□□□ -0.29
LIME1-202ENST00000444951 PF4P02776 101 aa13.23□□□□□ -0.29
LIME1-202ENST00000444951 S100A11P31949 105 aa13.23□□□□□ -0.29
LIME1-202ENST00000444951 SLURP1P55000 103 aa13.23□□□□□ -0.29
LIME1-202ENST00000444951 RUNX1Q01196 453 aa13.23□□□□□ -0.29
LIME1-202ENST00000444951 ZNF616Q08AN1 781 aa13.23□□□□□ -0.29
LIME1-202ENST00000444951 TIGITQ495A1 244 aa13.23□□□□□ -0.29
LIME1-202ENST00000444951 TCTE3Q8IZS6 198 aa13.23□□□□□ -0.29
LIME1-202ENST00000444951 OR11H4Q8NGC9 324 aa13.23□□□□□ -0.29
LIME1-202ENST00000444951 OR5C1Q8NGR4 320 aa13.23□□□□□ -0.29
LIME1-202ENST00000444951 DNAH9Q9NYC9 4486 aa13.22□□□□□ -0.29
LIME1-202ENST00000444951 ZFP92A6NM28 416 aa13.22□□□□□ -0.29
LIME1-202ENST00000444951 NUPL2O15504 423 aaKnown RBP13.22□□□□□ -0.29
LIME1-202ENST00000444951 CLN5O75503 358 aa13.22□□□□□ -0.29
LIME1-202ENST00000444951 CTSGP08311 255 aa13.22□□□□□ -0.29
LIME1-202ENST00000444951 OR10J1P30954 320 aa13.22□□□□□ -0.29
LIME1-202ENST00000444951 BAXQ07812 192 aa13.22□□□□□ -0.29
LIME1-202ENST00000444951 RPEL1Q2QD12 228 aa13.22□□□□□ -0.29
LIME1-202ENST00000444951 OXLD1Q5BKU9 147 aa13.22□□□□□ -0.29
LIME1-202ENST00000444951 OR4F17Q8NGA8 305 aa13.22□□□□□ -0.29
LIME1-202ENST00000444951 OR4F4Q96R69 305 aa13.22□□□□□ -0.29
LIME1-202ENST00000444951 GAR1Q9NY12 217 aaKnown RBP13.22□□□□□ -0.29
LIME1-202ENST00000444951 TNFSF18Q9UNG2 199 aa13.22□□□□□ -0.29
LIME1-202ENST00000444951 UBE2L5PA0A1B0GUS4 154 aa13.21□□□□□ -0.29
LIME1-202ENST00000444951 GGCTO75223 188 aaKnown RBP13.21□□□□□ -0.29
LIME1-202ENST00000444951 SCAF4O95104 1147 aaKnown RBP13.21□□□□□ -0.29
LIME1-202ENST00000444951 HOXD3P31249 432 aaPredicted RBP13.21□□□□□ -0.29
LIME1-202ENST00000444951 ADMP35318 185 aa13.21□□□□□ -0.29
LIME1-202ENST00000444951 FAM209BQ5JX69 171 aa13.21□□□□□ -0.29
LIME1-202ENST00000444951 TMEM116Q8NCL8 245 aa13.21□□□□□ -0.29
LIME1-202ENST00000444951 NEURL2Q9BR09 285 aa13.21□□□□□ -0.29
LIME1-202ENST00000444951 TMEM147Q9BVK8 224 aa13.21□□□□□ -0.29
LIME1-202ENST00000444951 UQCC1Q9NVA1 299 aa13.21□□□□□ -0.29
LIME1-202ENST00000444951 IGHV3OR16-8A0A075B7F1 116 aa13.2□□□□□ -0.3
LIME1-202ENST00000444951 PFDN1O60925 122 aa13.2□□□□□ -0.3
LIME1-202ENST00000444951 SCGB2A1O75556 95 aa13.2□□□□□ -0.3
LIME1-202ENST00000444951 FCGR2BP31994 310 aaPredicted RBP13.2□□□□□ -0.3
LIME1-202ENST00000444951 MYCNOSP40205 109 aa13.2□□□□□ -0.3
LIME1-202ENST00000444951 SPSB3Q6PJ21 355 aa13.2□□□□□ -0.3
LIME1-202ENST00000444951 AQP10Q96PS8 301 aa13.2□□□□□ -0.3
LIME1-202ENST00000444951 GGACTQ9BVM4 153 aa13.2□□□□□ -0.3
LIME1-202ENST00000444951 MFFQ9GZY8 342 aa13.2□□□□□ -0.3
LIME1-202ENST00000444951 NPVFQ9HCQ7 196 aa13.2□□□□□ -0.3
LIME1-202ENST00000444951 TRAV30A0A087WSZ9 112 aa13.19□□□□□ -0.3
LIME1-202ENST00000444951 ZNF320A2RRD8 509 aa13.19□□□□□ -0.3
LIME1-202ENST00000444951 RNF222A6NCQ9 220 aa13.19□□□□□ -0.3
LIME1-202ENST00000444951 YIF1AO95070 293 aa13.19□□□□□ -0.3
LIME1-202ENST00000444951 IGLC1P0CG04 106 aa13.19□□□□□ -0.3
LIME1-202ENST00000444951 ZP3P21754 424 aa13.19□□□□□ -0.3
LIME1-202ENST00000444951 OR2F1Q13607 317 aa13.19□□□□□ -0.3
LIME1-202ENST00000444951 ATP6V1FQ16864 119 aa13.19□□□□□ -0.3
LIME1-202ENST00000444951 FBXL17Q9UF56 701 aa13.19□□□□□ -0.3
LIME1-202ENST00000444951 IGKV1D-37A0A075B6S9 117 aa13.18□□□□□ -0.3
LIME1-202ENST00000444951 IGKV1OR2-108A0A075B7D4 117 aa13.18□□□□□ -0.3
LIME1-202ENST00000444951 IGKV1-17P01599 117 aa13.18□□□□□ -0.3
LIME1-202ENST00000444951 C1QBP02746 253 aa13.18□□□□□ -0.3
LIME1-202ENST00000444951 EIF2B2P49770 351 aaKnown RBP13.18□□□□□ -0.3
LIME1-202ENST00000444951 SYNJ2BPP57105 145 aa13.18□□□□□ -0.3
LIME1-202ENST00000444951 ZNF90Q03938 601 aa13.18□□□□□ -0.3
LIME1-202ENST00000444951 ZFP69Q49AA0 526 aa13.18□□□□□ -0.3
LIME1-202ENST00000444951 TMEM144Q7Z5S9 345 aa13.18□□□□□ -0.3
LIME1-202ENST00000444951 DLX4Q92988 240 aaPredicted RBP13.18□□□□□ -0.3
LIME1-202ENST00000444951 ATP6V0BQ99437 205 aa13.18□□□□□ -0.3
LIME1-202ENST00000444951 ATP5SQ99766 215 aa13.18□□□□□ -0.3
LIME1-202ENST00000444951 WFDC1Q9HC57 220 aa13.18□□□□□ -0.3
LIME1-202ENST00000444951 KMT2CQ8NEZ4 4911 aaKnown RBP13.17□□□□□ -0.3
LIME1-202ENST00000444951 FNDC10F2Z333 226 aa13.17□□□□□ -0.3
LIME1-202ENST00000444951 FGF7P21781 194 aa13.17□□□□□ -0.3
LIME1-202ENST00000444951 RELQ04864 619 aaPredicted RBP13.17□□□□□ -0.3
LIME1-202ENST00000444951 FHL3Q13643 280 aa13.17□□□□□ -0.3
LIME1-202ENST00000444951 FAM106AQ4KMX7 169 aa13.17□□□□□ -0.3
LIME1-202ENST00000444951 TEPPQ6URK8 271 aa13.17□□□□□ -0.3
LIME1-202ENST00000444951 BTNL8Q6UX41 500 aa13.17□□□□□ -0.3
LIME1-202ENST00000444951 THAP8Q8NA92 274 aa13.17□□□□□ -0.3
LIME1-202ENST00000444951 C20orf24Q9BUV8 137 aa13.17□□□□□ -0.3
LIME1-202ENST00000444951 AURKAIP1Q9NWT8 199 aaPredicted RBP13.17□□□□□ -0.3
LIME1-202ENST00000444951 HMSDA8MTL9 139 aa13.16□□□□□ -0.3
LIME1-202ENST00000444951 ZNF207O43670 478 aaKnown RBP13.16□□□□□ -0.3
LIME1-202ENST00000444951 RD3LP0DJH9 198 aa13.16□□□□□ -0.3
LIME1-202ENST00000444951 CXCL2P19875 107 aa13.16□□□□□ -0.3
LIME1-202ENST00000444951 GATA2P23769 480 aaPredicted RBP13.16□□□□□ -0.3
LIME1-202ENST00000444951 VWC2Q2TAL6 325 aa13.16□□□□□ -0.3
LIME1-202ENST00000444951 ZNF600Q6ZNG1 722 aa13.16□□□□□ -0.3
LIME1-202ENST00000444951 RCC1LQ96I51 464 aaKnown RBP13.16□□□□□ -0.3
LIME1-202ENST00000444951 TRGV9Q99603 122 aa13.16□□□□□ -0.3
LIME1-202ENST00000444951 PUS1Q9Y606 427 aaKnown RBP eCLIP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 162.4 ms