RNA–Protein interactions for RNA: ENST00000442218.2

SLC48A1-201, Transcript of solute carrier family 48 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC48A1, Length 3,010 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-201ENST00000442218 S4R3C0 116 aa10.63□□□□□ -0.71
SLC48A1-201ENST00000442218 SPG11Q96JI7 2443 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 TRGV8A0A0C4DH27 118 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 RPLP1P05386 114 aaKnown RBP10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 BRS3P32247 399 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 SELENOTP62341 195 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 DMRTA1Q5VZB9 504 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 SLC25A2Q9BXI2 301 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 TRAV8-1A0A0A6YYK1 113 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 LYNX1G3V0Z9 82 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 LHBP01229 141 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 APCSP02743 223 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 LYNX1P0DP58 116 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 HINT1P49773 126 aaPredicted RBP10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 CX3CL1P78423 397 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 Q6ZN92 141 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 ABHD17AQ96GS6 310 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 MIEN1Q9BRT3 115 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 LPAR2Q9HBW0 351 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 SLC25A10Q9UBX3 287 aaPredicted RBP10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 AMMECR1Q9Y4X0 333 aaPredicted RBP10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 SELENOKQ9Y6D0 94 aa10.62□□□□□ -0.71
SLC48A1-201ENST00000442218 C8orf88P0DMB2 117 aa10.61□□□□□ -0.71
SLC48A1-201ENST00000442218 ZNF138P52744 262 aa10.61□□□□□ -0.71
SLC48A1-201ENST00000442218 TNXAQ16473 311 aa10.61□□□□□ -0.71
SLC48A1-201ENST00000442218 TEX43Q6ZNM6 134 aa10.61□□□□□ -0.71
SLC48A1-201ENST00000442218 ZNF331Q9NQX6 463 aaPredicted RBP10.61□□□□□ -0.71
SLC48A1-201ENST00000442218 PRNDQ9UKY0 176 aa10.61□□□□□ -0.71
SLC48A1-201ENST00000442218 GLRXP35754 106 aa10.61□□□□□ -0.71
SLC48A1-201ENST00000442218 AARDQ4LEZ3 155 aa10.61□□□□□ -0.71
SLC48A1-201ENST00000442218 PATE2Q6UY27 113 aa10.61□□□□□ -0.71
SLC48A1-201ENST00000442218 TMEM167BQ9NRX6 74 aa10.61□□□□□ -0.71
SLC48A1-201ENST00000442218 CRYBG3Q68DQ2 2970 aa10.61□□□□□ -0.71
SLC48A1-201ENST00000442218 PAFAH1B2P68402 229 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 ZNF841Q6ZN19 808 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 Q8N976 141 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 SLC35E1Q96K37 410 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 PMCHL2Q9BQD1 86 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 PAXXQ9BUH6 204 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 SFXN3Q9BWM7 321 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 CD69Q07108 199 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 STPG4Q8N801 248 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 TSKUQ8WUA8 353 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 C11orf52Q96A22 123 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 DNAJC4Q9NNZ3 241 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 RPUSD1Q9UJJ7 312 aaKnown RBP10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 VWC2LB2RUY7 222 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 C9JCJ5 164 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 TCF21O43680 179 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 SELENOVP59797 346 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 LBHQ53QV2 105 aaPredicted RBP10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 LINC00322Q6ZN03 302 aaPredicted RBP10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 LINC00305Q7Z4B0 112 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 C1orf162Q8NEQ5 155 aaPredicted RBP10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 NUDT10Q8NFP7 164 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 NUDT11Q96G61 164 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 FAM167A-AS1Q96KT0 104 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 ZNF430Q9H8G1 570 aaPredicted RBP10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 GOLT1BQ9Y3E0 138 aa10.6□□□□□ -0.71
SLC48A1-201ENST00000442218 HIGD1CA8MV81 97 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 SLC25A5P05141 298 aaKnown RBP10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 KIR2DS2P43631 304 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 C10orf113Q5VZT2 155 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 LINC00173Q6ZV60 143 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 NIT1Q86X76 327 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 C11orf42Q8N5U0 333 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 NUP35Q8NFH5 326 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 CLEC7AQ9BXN2 247 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 ZNF324O75467 553 aaPredicted RBP10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 CSN3P07498 182 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 FAM87AP0C7U9 286 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 FOSL1P15407 271 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 MZT1Q08AG7 82 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 TMEM200BQ69YZ2 307 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 SLC25A48Q6ZT89 311 aaKnown RBP10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 FLYWCH2Q96CP2 140 aaKnown RBP10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 KCNS1Q96KK3 526 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 SSUH2Q9Y2M2 353 aa10.59□□□□□ -0.71
SLC48A1-201ENST00000442218 CENPEQ02224 2701 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 PGPA6NDG6 321 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 AMY1AP04745 511 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 CD40P25942 277 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 TAS2R45P59539 299 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 ERHP84090 104 aaKnown RBP10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 TMEM249Q2WGJ8 235 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 ZNF788Q6ZQV5 615 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 GNB1LQ9BYB4 327 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 DPRXA6NFQ7 191 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 CGB1A6NKQ9 187 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 FAM90A9PA6NNJ1 464 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 HSBP1O75506 76 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 PPOXP50336 477 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 SPATA12Q7Z6I5 190 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 C18orf32Q8TCD1 76 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 BORCS7Q96B45 105 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 PGLYRP4Q96LB8 373 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 IGF2BP2-AS1Q96M15 143 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 TPPP3Q9BW30 176 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 ZNF835Q9Y2P0 537 aa10.58□□□□□ -0.72
SLC48A1-201ENST00000442218 MUC21A0A0G2JKD1 596 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms