RNA–Protein interactions for RNA: ENST00000441089.1

PTPN4-206, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-206ENST00000441089 HMSDA8MTL9 139 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 CEBPZOSA8MTT3 80 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 E5RGE8 158 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 RBMXL2O75526 392 aaKnown RBP3.67□□□□□ -1.82
PTPN4-206ENST00000441089 IFNA17P01571 189 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 REG1AP05451 166 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 FGF2P09038 288 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 AREGP15514 252 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 MAS1LP35410 378 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 RPL27AP46776 148 aaKnown RBP3.67□□□□□ -1.82
PTPN4-206ENST00000441089 P2RY1P47900 373 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 HSPE1P61604 102 aaKnown RBP3.67□□□□□ -1.82
PTPN4-206ENST00000441089 GNB1P62873 340 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 CX3CL1P78423 397 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 WT1-ASQ06250 92 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 FGL1Q08830 312 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 BSXQ3C1V8 233 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 KHDC1LQ5JSQ8 128 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 C9orf66Q5T8R8 295 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 TMEM14EPQ6UXP3 125 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 CENPVQ7Z7K6 275 aaPredicted RBP3.67□□□□□ -1.82
PTPN4-206ENST00000441089 ZNF546Q86UE3 836 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 MMD2Q8IY49 270 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 OR2C3Q8N628 320 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 TMEM252Q8N6L7 170 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 OR8H1Q8NGG4 311 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 OR1L8Q8NGR8 309 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 OR5B3Q8NH48 314 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 THAP6Q8TBB0 222 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 DTD1Q8TEA8 209 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 SRSF12Q8WXF0 261 aaKnown RBP3.67□□□□□ -1.82
PTPN4-206ENST00000441089 SMIM8Q96KF7 97 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 HYLS1Q96M11 299 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 AQP10Q96PS8 301 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 FAM103A1Q9BTL3 118 aaKnown RBP3.67□□□□□ -1.82
PTPN4-206ENST00000441089 HINT2Q9BX68 163 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 MFFQ9GZY8 342 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 WFDC1Q9HC57 220 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 LYRM2Q9NU23 88 aaPredicted RBP3.67□□□□□ -1.82
PTPN4-206ENST00000441089 PSENENQ9NZ42 101 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 KIAA1456Q9P272 454 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 MOB4Q9Y3A3 225 aa3.67□□□□□ -1.82
PTPN4-206ENST00000441089 PRSS46E5RG02 174 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 INS-IGF2F8WCM5 200 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 L7N2F9 121 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 ATP6V0E1O15342 81 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 FGF16O43320 207 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 TSC22D2O75157 780 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 MED6O75586 246 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 CST7O76096 145 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 HLA-DRB1P01911 266 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 RLN2P04090 185 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 FRMD6-AS1P0C7T7 363 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 METTL15P1P0C7V9 234 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 PET100P0DJ07 73 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 APELAP0DMC3 54 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 RNASE2P10153 161 aaKnown RBP3.66□□□□□ -1.82
PTPN4-206ENST00000441089 RPL12P30050 165 aaKnown RBP3.66□□□□□ -1.82
PTPN4-206ENST00000441089 MYCNOSP40205 109 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 HOXA1P49639 335 aaPredicted RBP3.66□□□□□ -1.82
PTPN4-206ENST00000441089 AP2S1P53680 142 aaPredicted RBP3.66□□□□□ -1.82
PTPN4-206ENST00000441089 MFAP2P55001 183 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 TAS2R30P59541 319 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 BLCAPP62952 87 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 VAMP2P63027 116 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 EWSR1Q01844 656 aaKnown RBP eCLIP3.66□□□□□ -1.82
PTPN4-206ENST00000441089 TMEM267Q0VDI3 215 aaPredicted RBP3.66□□□□□ -1.82
PTPN4-206ENST00000441089 FXYD3Q14802 87 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 PLGLAQ15195 96 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 SPANXN5Q5MJ07 72 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 PVRIGQ6DKI7 326 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 ZNF562Q6V9R5 426 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 TMUB2Q71RG4 321 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 KCNRGQ8N5I3 272 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 SLC24A4Q8NFF2 622 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 ARPC1AQ92747 370 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 RAB24Q969Q5 203 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 RAB40CQ96S21 281 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 P2RX4Q99571 388 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 RASL11BQ9BPW5 248 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 COMMD5Q9GZQ3 224 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 KLK15Q9H2R5 256 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 PLEKHA3Q9HB20 300 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 CYTL1Q9NRR1 136 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 ZFP57Q9NU63 452 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 FKBP11Q9NYL4 201 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 FBXL17Q9UF56 701 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 PITPNC1Q9UKF7 332 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 HSPB11Q9Y547 144 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 WSB1Q9Y6I7 421 aa3.66□□□□□ -1.82
PTPN4-206ENST00000441089 A0A1W2PN81 502 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 G3V318 75 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 SOX15O60248 233 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 CNIH1O95406 144 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 CFDP00746 253 aaPredicted RBP3.65□□□□□ -1.83
PTPN4-206ENST00000441089 PRH1P02810 166 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 OR13C7P0DN81 318 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 CTRB1P17538 263 aa3.65□□□□□ -1.83
PTPN4-206ENST00000441089 PVALBP20472 110 aaPredicted RBP3.65□□□□□ -1.83
PTPN4-206ENST00000441089 NPY1RP25929 384 aa3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms