RNA–Protein interactions for RNA: ENST00000439962.1

EDEM3-203, Transcript of ER degradation enhancing alpha-mannosidase like protein 3, humanhuman

TSL 1 (best)

Gene EDEM3, Length 2,872 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM3-203ENST00000439962 ZNF418Q8TF45 676 aaPredicted RBP3.82□□□□□ -1.8
EDEM3-203ENST00000439962 ZNF714Q96N38 554 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 SRSF8Q9BRL6 282 aaKnown RBP3.82□□□□□ -1.8
EDEM3-203ENST00000439962 SLC45A2Q9UMX9 530 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 PXMP4Q9Y6I8 212 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 SAA2-SAA4A0A096LPE2 208 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 TRBV23-1A0A0A0MS06 115 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 TGIF2-C20orf24A0A0A6YYL0 155 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 IGHV2-70DA0A0C4DH43 119 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 FAM181BA6NEQ2 426 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 SH2D7A6NKC9 451 aaPredicted RBP3.82□□□□□ -1.8
EDEM3-203ENST00000439962 TNFRSF13BO14836 293 aaPredicted RBP3.82□□□□□ -1.8
EDEM3-203ENST00000439962 YIF1AO95070 293 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 IGHV4-59P01825 116 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 SAA2P0DJI9 122 aaPredicted RBP3.82□□□□□ -1.8
EDEM3-203ENST00000439962 MC5RP33032 325 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 LBHQ53QV2 105 aaPredicted RBP3.82□□□□□ -1.8
EDEM3-203ENST00000439962 CT45A1Q5HYN5 189 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 UTF1Q5T230 341 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 OR4A47Q6IF82 309 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 LHFPL4Q7Z7J7 247 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 TMEM219Q86XT9 240 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 OR5AN1Q8NGI8 311 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 OR2T10Q8NGZ9 312 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 OR4F5Q8NH21 305 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 CT45A3Q8NHU0 189 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 ZNF48Q96MX3 618 aaPredicted RBP3.82□□□□□ -1.8
EDEM3-203ENST00000439962 OR4F4Q96R69 305 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 MGST2Q99735 147 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 SLC25A22Q9H936 323 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 GSN-AS1Q9NRJ2 163 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 INSIG2Q9Y5U4 225 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 RFNGQ9Y644 331 aa3.82□□□□□ -1.8
EDEM3-203ENST00000439962 IGHV3-43A0A0B4J1X8 118 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 OR5G3P0C626 314 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 TRGC1P0CF51 173 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 IGHV3-43DP0DP04 118 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 HIST1H1BP16401 226 aaKnown RBP3.81□□□□□ -1.8
EDEM3-203ENST00000439962 IL3RAP26951 378 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 GNG10P50151 68 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 SUB1P53999 127 aaKnown RBP eCLIP3.81□□□□□ -1.8
EDEM3-203ENST00000439962 FGF8P55075 233 aaPredicted RBP3.81□□□□□ -1.8
EDEM3-203ENST00000439962 YPEL3P61236 119 aaPredicted RBP3.81□□□□□ -1.8
EDEM3-203ENST00000439962 SELENOTP62341 195 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 ADIRFQ15847 76 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 ETFRF1Q6IPR1 90 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 RASL11AQ6T310 242 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 MRPL52Q86TS9 123 aaKnown RBP3.81□□□□□ -1.8
EDEM3-203ENST00000439962 LINC01551Q86U37 167 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 LYG1Q8N1E2 194 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 ZNF114Q8NC26 417 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 TMEM167AQ8TBQ9 72 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 RHOVQ96L33 236 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 RNF5Q99942 180 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 PLEKHA3Q9HB20 300 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 TECRQ9NZ01 308 aaKnown RBP3.81□□□□□ -1.8
EDEM3-203ENST00000439962 SIGLEC9Q9Y336 463 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 CENPVL3A0A0U1RRI6 287 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 A0A1B0GV50 99 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 A0A1W2PRE2 83 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 ENSAO43768 121 aaKnown RBP3.81□□□□□ -1.8
EDEM3-203ENST00000439962 PAGE4O60829 102 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 MMP23AO75900 390 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 MT-ND6P03923 174 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 TRGC2P03986 189 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 ESDP10768 282 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 GCHFRP30047 84 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 REG1BP48304 166 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 NDUFA6P56556 154 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 HLA-DRB5Q30154 266 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 TMEM155Q4W5P6 130 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 DMRTA1Q5VZB9 504 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 C3orf56Q8N813 242 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 ZNF383Q8NA42 475 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 OR1L4Q8NGR5 311 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 OR1P1Q8NH06 330 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 ABHD5Q8WTS1 349 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 GATAD1Q8WUU5 269 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 PFDN5Q99471 154 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 CHRDL1Q9BU40 450 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 NIT2Q9NQR4 276 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 FUT9Q9Y231 359 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 OR51B2Q9Y5P1 312 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 DNAJC9-AS1A6NH13 148 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 CORTO00230 105 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 SAA4P35542 130 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 LGALS7P47929 136 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 ZNF134P52741 427 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 LGALS4P56470 323 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 ERHP84090 104 aaKnown RBP3.81□□□□□ -1.8
EDEM3-203ENST00000439962 ARSJQ5FYB0 599 aaPredicted RBP3.81□□□□□ -1.8
EDEM3-203ENST00000439962 TMEM200BQ69YZ2 307 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 ZNF343Q6P1L6 599 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 TCF23Q7RTU1 214 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 THAP8Q8NA92 274 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 STXBP6Q8NFX7 210 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 OR4C13Q8NGP0 309 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 OR4X1Q8NH49 305 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 TMEM158Q8WZ71 300 aa3.81□□□□□ -1.8
EDEM3-203ENST00000439962 FRZBQ92765 325 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms