RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 OR7C2O60412 319 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 NUDT3O95989 172 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 ASPHD1Q5U4P2 390 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 TMEM70Q9BUB7 260 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 ST20Q9HBF5 79 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 DOPEY2Q9Y3R5 2298 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 PCNX1Q96RV3 2341 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 OR2T8A6NH00 312 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 OR4C46A6NHA9 309 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 GPR6P46095 362 aaPredicted RBP6.98□□□□□ -1.29
HPS4-206ENST00000439453 BVES-AS1Q5T3Y7 98 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 CXorf67Q86X51 503 aaPredicted RBP6.98□□□□□ -1.29
HPS4-206ENST00000439453 ITLN2Q8WWU7 325 aaPredicted RBP6.98□□□□□ -1.29
HPS4-206ENST00000439453 PLPPR2Q96GM1 343 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 PSMG3-AS1Q96PY0 264 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 DCTN5Q9BTE1 182 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 SPINT2O43291 252 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 TBC1D28Q2M2D7 210 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 AMMECR1LQ6DCA0 310 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 TRIB1Q96RU8 372 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 B4GALT7Q9UBV7 327 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 METRNQ9UJH8 293 aa6.98□□□□□ -1.29
HPS4-206ENST00000439453 ADH4P08319 380 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 GABRA6Q16445 453 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 GTF2H5Q6ZYL4 71 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 DEFB125Q8N687 156 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 NUP35Q8NFH5 326 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 BCL2L2Q92843 193 aaPredicted RBP6.97□□□□□ -1.29
HPS4-206ENST00000439453 MBD6Q96DN6 1003 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 C15orf65H3BRN8 121 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 SMPD2O60906 423 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 OR2J3O76001 311 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 CELA3BP08861 270 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 TMEM11P17152 192 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 RPL39P5Q59GN2 51 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 ACP7Q6ZNF0 438 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 NANOS1Q8WY41 292 aaKnown RBP6.97□□□□□ -1.29
HPS4-206ENST00000439453 OR2V2Q96R30 315 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 SSBP4Q9BWG4 385 aaPredicted RBP6.97□□□□□ -1.29
HPS4-206ENST00000439453 CSTL1Q9H114 145 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 ZNF355PQ9NSJ1 428 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 MUC21A0A0G2JKD1 596 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 MUC21A0A140T8X8 626 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 A0A1W2PRE2 83 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 C15orf61A6NNL5 157 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 MUC21Q5SSG8 566 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 OR2T6Q8NHC8 308 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 GRAMD2BQ96HH9 432 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 S1PR3Q99500 378 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 VKORC1Q9BQB6 163 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 C12orf49Q9H741 205 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 SH3BGRL2Q9UJC5 107 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 LRBAP50851 2863 aa6.97□□□□□ -1.29
HPS4-206ENST00000439453 hDV102S1A0JD36 115 aa6.96□□□□□ -1.29
HPS4-206ENST00000439453 TAS2R45P59539 299 aa6.96□□□□□ -1.29
HPS4-206ENST00000439453 GUSBP1Q15486 140 aa6.96□□□□□ -1.29
HPS4-206ENST00000439453 FAM120AOSQ5T036 256 aa6.96□□□□□ -1.29
HPS4-206ENST00000439453 SLC25A34Q6PIV7 304 aa6.96□□□□□ -1.29
HPS4-206ENST00000439453 VHLLQ6RSH7 139 aa6.96□□□□□ -1.29
HPS4-206ENST00000439453 C11orf53Q8IXP5 236 aa6.96□□□□□ -1.29
HPS4-206ENST00000439453 SLC25A40Q8TBP6 338 aa6.96□□□□□ -1.29
HPS4-206ENST00000439453 URB1-AS1Q96HZ7 61 aa6.96□□□□□ -1.29
HPS4-206ENST00000439453 GNG12Q9UBI6 72 aa6.96□□□□□ -1.29
HPS4-206ENST00000439453 ICE1Q9Y2F5 2266 aa6.96□□□□□ -1.29
HPS4-206ENST00000439453 TACC2O95359 2948 aa6.96□□□□□ -1.29
HPS4-206ENST00000439453 SH2D7A6NKC9 451 aaPredicted RBP6.96□□□□□ -1.3
HPS4-206ENST00000439453 GATA2P23769 480 aaPredicted RBP6.96□□□□□ -1.3
HPS4-206ENST00000439453 RTL8BQ17RB0 113 aa6.96□□□□□ -1.3
HPS4-206ENST00000439453 OBP2BQ9NPH6 170 aa6.96□□□□□ -1.3
HPS4-206ENST00000439453 C1RLQ9NZP8 487 aa6.96□□□□□ -1.3
HPS4-206ENST00000439453 IQCF6A8MYZ5 107 aa6.96□□□□□ -1.3
HPS4-206ENST00000439453 FNDC10F2Z333 226 aa6.96□□□□□ -1.3
HPS4-206ENST00000439453 CCL21O00585 134 aa6.96□□□□□ -1.3
HPS4-206ENST00000439453 CRXO43186 299 aaPredicted RBP6.96□□□□□ -1.3
HPS4-206ENST00000439453 CAMPP49913 170 aa6.96□□□□□ -1.3
HPS4-206ENST00000439453 HSPE1P61604 102 aaKnown RBP6.96□□□□□ -1.3
HPS4-206ENST00000439453 C12orf54Q6X4T0 127 aa6.96□□□□□ -1.3
HPS4-206ENST00000439453 FAM231DQ6ZW35 169 aa6.96□□□□□ -1.3
HPS4-206ENST00000439453 SETXQ7Z333 2677 aaKnown RBP6.96□□□□□ -1.3
HPS4-206ENST00000439453 LINC00479Q96M42 142 aa6.96□□□□□ -1.3
HPS4-206ENST00000439453 A0A0G2JNJ9 132 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 J3QW42 95 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 PSG9Q00887 426 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 EDDM3AQ14507 147 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 C1orf185Q5T7R7 199 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 SARAFQ96BY9 339 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 NUDT11Q96G61 164 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 Q9UFV3 132 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 MBD3L4A6NDZ8 208 aaPredicted RBP6.95□□□□□ -1.3
HPS4-206ENST00000439453 MBD3L3A6NE82 208 aaPredicted RBP6.95□□□□□ -1.3
HPS4-206ENST00000439453 MBD3L5A6NJ08 208 aaPredicted RBP6.95□□□□□ -1.3
HPS4-206ENST00000439453 SYS1-DBNDD2H3BUS1 97 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 IGHV3-13P01766 116 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 IGHV3-7P01780 117 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 KIR2DS2P43631 304 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 TRAT1Q6PIZ9 186 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 LINC00173Q6ZV60 143 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 MOB3BQ86TA1 216 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 C9orf106Q8NAJ2 232 aa6.95□□□□□ -1.3
HPS4-206ENST00000439453 MBD3L2Q8NHZ7 208 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms