RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 ACY3Q96HD9 319 aa13.58□□□□□ -0.24
HMGN1-207ENST00000436324 DNASE2O00115 360 aaPredicted RBP13.57□□□□□ -0.24
HMGN1-207ENST00000436324 SFT2D2O95562 160 aa13.57□□□□□ -0.24
HMGN1-207ENST00000436324 SLC25A4P12235 298 aa13.57□□□□□ -0.24
HMGN1-207ENST00000436324 OR10J1P30954 320 aa13.57□□□□□ -0.24
HMGN1-207ENST00000436324 PAFAH1B2P68402 229 aa13.57□□□□□ -0.24
HMGN1-207ENST00000436324 NOXA1Q86UR1 476 aa13.57□□□□□ -0.24
HMGN1-207ENST00000436324 CENPSQ8N2Z9 138 aa13.57□□□□□ -0.24
HMGN1-207ENST00000436324 OR1S2Q8NGQ3 325 aa13.57□□□□□ -0.24
HMGN1-207ENST00000436324 DEDD2Q8WXF8 326 aa13.57□□□□□ -0.24
HMGN1-207ENST00000436324 NPIPB3Q92617 1050 aa13.57□□□□□ -0.24
HMGN1-207ENST00000436324 METTL26Q96S19 204 aa13.57□□□□□ -0.24
HMGN1-207ENST00000436324 OVOL2Q9BRP0 275 aa13.57□□□□□ -0.24
HMGN1-207ENST00000436324 IGLC1P0CG04 106 aa13.56□□□□□ -0.24
HMGN1-207ENST00000436324 APOC4P55056 127 aa13.56□□□□□ -0.24
HMGN1-207ENST00000436324 ETFRF1Q6IPR1 90 aa13.56□□□□□ -0.24
HMGN1-207ENST00000436324 Q8WTZ3 238 aa13.56□□□□□ -0.24
HMGN1-207ENST00000436324 MS4A6AQ9H2W1 248 aa13.56□□□□□ -0.24
HMGN1-207ENST00000436324 TMEM231Q9H6L2 316 aa13.56□□□□□ -0.24
HMGN1-207ENST00000436324 U3KQ87 197 aa13.56□□□□□ -0.24
HMGN1-207ENST00000436324 DUXBA0A1W2PPF3 345 aa13.55□□□□□ -0.24
HMGN1-207ENST00000436324 IFNA4P05014 189 aa13.55□□□□□ -0.24
HMGN1-207ENST00000436324 HOXB5P09067 269 aa13.55□□□□□ -0.24
HMGN1-207ENST00000436324 IAPPP10997 89 aa13.55□□□□□ -0.24
HMGN1-207ENST00000436324 RBMS2Q15434 407 aaKnown RBP13.55□□□□□ -0.24
HMGN1-207ENST00000436324 RABAC1Q9UI14 185 aa13.55□□□□□ -0.24
HMGN1-207ENST00000436324 NBEAL2Q6ZNJ1 2754 aa13.54□□□□□ -0.24
HMGN1-207ENST00000436324 PIGBOS1A0A0B4J2F0 54 aa13.54□□□□□ -0.24
HMGN1-207ENST00000436324 A0A1W2PS18 150 aa13.54□□□□□ -0.24
HMGN1-207ENST00000436324 CD5P06127 495 aa13.54□□□□□ -0.24
HMGN1-207ENST00000436324 CRYBB3P26998 211 aa13.54□□□□□ -0.24
HMGN1-207ENST00000436324 CMC4P56277 68 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-207ENST00000436324 DEFB135Q30KP9 77 aa13.54□□□□□ -0.24
HMGN1-207ENST00000436324 STPG3Q8N7X2 389 aa13.54□□□□□ -0.24
HMGN1-207ENST00000436324 LRTM2Q8N967 370 aa13.54□□□□□ -0.24
HMGN1-207ENST00000436324 NARS2Q96I59 477 aaKnown RBP13.54□□□□□ -0.24
HMGN1-207ENST00000436324 SDHCQ99643 169 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-207ENST00000436324 MAP6D1Q9H9H5 199 aa13.54□□□□□ -0.24
HMGN1-207ENST00000436324 PAIP2BQ9ULR5 123 aaKnown RBP13.54□□□□□ -0.24
HMGN1-207ENST00000436324 FLVCR2Q9UPI3 526 aa13.54□□□□□ -0.24
HMGN1-207ENST00000436324 KMT2CQ8NEZ4 4911 aaKnown RBP13.53□□□□□ -0.24
HMGN1-207ENST00000436324 SPRY2O43597 315 aa13.53□□□□□ -0.24
HMGN1-207ENST00000436324 PITX3O75364 302 aa13.53□□□□□ -0.24
HMGN1-207ENST00000436324 P2RY1P47900 373 aa13.53□□□□□ -0.24
HMGN1-207ENST00000436324 YPEL3P61236 119 aaPredicted RBP13.53□□□□□ -0.24
HMGN1-207ENST00000436324 FAM24BQ8N5W8 94 aa13.53□□□□□ -0.24
HMGN1-207ENST00000436324 STXBP6Q8NFX7 210 aa13.53□□□□□ -0.24
HMGN1-207ENST00000436324 MAGT1Q9H0U3 335 aa13.53□□□□□ -0.24
HMGN1-207ENST00000436324 DNAH7Q8WXX0 4024 aa13.53□□□□□ -0.24
HMGN1-207ENST00000436324 NAP1L6A6NFF2 107 aa13.52□□□□□ -0.25
HMGN1-207ENST00000436324 IL4P05112 153 aa13.52□□□□□ -0.25
HMGN1-207ENST00000436324 DEFB131AP59861 70 aa13.52□□□□□ -0.25
HMGN1-207ENST00000436324 GGNBP1Q5YKI7 109 aa13.52□□□□□ -0.25
HMGN1-207ENST00000436324 LEMD1Q68G75 181 aa13.52□□□□□ -0.25
HMGN1-207ENST00000436324 TMED3Q9Y3Q3 217 aa13.52□□□□□ -0.25
HMGN1-207ENST00000436324 KIR2DL5BA0A0G2JN68 375 aa13.51□□□□□ -0.25
HMGN1-207ENST00000436324 KIR2DL5BA0A0G2JPC4 375 aa13.51□□□□□ -0.25
HMGN1-207ENST00000436324 UBE2CO00762 179 aa13.51□□□□□ -0.25
HMGN1-207ENST00000436324 NDUFB6O95139 128 aa13.51□□□□□ -0.25
HMGN1-207ENST00000436324 HNRNPCP07910 306 aaKnown RBP eCLIP13.51□□□□□ -0.255e-6■■■□□ 18.1
HMGN1-207ENST00000436324 RD3LP0DJH9 198 aa13.51□□□□□ -0.25
HMGN1-207ENST00000436324 SLC25A6P12236 298 aa13.51□□□□□ -0.25
HMGN1-207ENST00000436324 Q6ZWC4 215 aa13.51□□□□□ -0.25
HMGN1-207ENST00000436324 KIR2DL5AQ8N109 375 aa13.51□□□□□ -0.25
HMGN1-207ENST00000436324 KIR2DL5BQ8NHK3 375 aa13.51□□□□□ -0.25
HMGN1-207ENST00000436324 GRAMD2BQ96HH9 432 aa13.51□□□□□ -0.25
HMGN1-207ENST00000436324 NDUFA13Q9P0J0 144 aa13.51□□□□□ -0.25
HMGN1-207ENST00000436324 C9orf170A2RU37 121 aa13.5□□□□□ -0.25
HMGN1-207ENST00000436324 CENPXA8MT69 81 aa13.5□□□□□ -0.25
HMGN1-207ENST00000436324 WRBO00258 174 aa13.5□□□□□ -0.25
HMGN1-207ENST00000436324 TOMM40O96008 361 aa13.5□□□□□ -0.25
HMGN1-207ENST00000436324 UBE2MP61081 183 aaKnown RBP13.5□□□□□ -0.25
HMGN1-207ENST00000436324 USF2Q15853 346 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-207ENST00000436324 SLC35E1Q96K37 410 aa13.5□□□□□ -0.25
HMGN1-207ENST00000436324 U3KQE9 123 aa13.5□□□□□ -0.25
HMGN1-207ENST00000436324 MED6O75586 246 aa13.49□□□□□ -0.25
HMGN1-207ENST00000436324 ADAP1O75689 374 aa13.49□□□□□ -0.25
HMGN1-207ENST00000436324 PSG1P11464 419 aa13.49□□□□□ -0.25
HMGN1-207ENST00000436324 IL7P13232 177 aa13.49□□□□□ -0.25
HMGN1-207ENST00000436324 ANXA7P20073 488 aaKnown RBP13.49□□□□□ -0.25
HMGN1-207ENST00000436324 GPX4P36969 197 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-207ENST00000436324 ATP5IP56385 69 aaPredicted RBP13.49□□□□□ -0.25
HMGN1-207ENST00000436324 RAB11AP62491 216 aa13.49□□□□□ -0.25
HMGN1-207ENST00000436324 GAMTQ14353 236 aa13.49□□□□□ -0.25
HMGN1-207ENST00000436324 OR51G1Q8NGK1 321 aa13.49□□□□□ -0.25
HMGN1-207ENST00000436324 IL17DQ8TAD2 202 aa13.49□□□□□ -0.25
HMGN1-207ENST00000436324 RNF183Q96D59 192 aa13.49□□□□□ -0.25
HMGN1-207ENST00000436324 CSTL1Q9H114 145 aa13.49□□□□□ -0.25
HMGN1-207ENST00000436324 TP53TG1Q9Y2A0 90 aa13.49□□□□□ -0.25
HMGN1-207ENST00000436324 TRAV2A0A0B4J234 112 aa13.48□□□□□ -0.25
HMGN1-207ENST00000436324 A0A0J9YWU9 116 aa13.48□□□□□ -0.25
HMGN1-207ENST00000436324 ZFP92A6NM28 416 aa13.48□□□□□ -0.25
HMGN1-207ENST00000436324 MPTX1A8MV57 137 aa13.48□□□□□ -0.25
HMGN1-207ENST00000436324 FAM90A26D6RGX4 464 aa13.48□□□□□ -0.25
HMGN1-207ENST00000436324 K7EQG2 157 aa13.48□□□□□ -0.25
HMGN1-207ENST00000436324 SYNGR2O43760 224 aa13.48□□□□□ -0.25
HMGN1-207ENST00000436324 OR4E1P0C645 316 aa13.48□□□□□ -0.25
HMGN1-207ENST00000436324 BTCP35070 178 aa13.48□□□□□ -0.25
HMGN1-207ENST00000436324 C16orf54Q6UWD8 224 aa13.48□□□□□ -0.25
HMGN1-207ENST00000436324 PBDC1Q9BVG4 233 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 592.9 ms