RNA–Protein interactions for RNA: ENST00000434233.2

LINC00339-204, long intergenic non-protein coding RNA 339, humanhuman

TSL 1 (best)

Gene LINC00339, Length 929 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-204ENST00000434233 OR11H1Q8NG94 326 aa9.49□□□□□ -0.89
LINC00339-204ENST00000434233 OR1N2Q8NGR9 330 aa9.49□□□□□ -0.89
LINC00339-204ENST00000434233 DPF1Q92782 380 aa9.49□□□□□ -0.89
LINC00339-204ENST00000434233 ACY3Q96HD9 319 aa9.49□□□□□ -0.89
LINC00339-204ENST00000434233 TMEM147Q9BVK8 224 aa9.49□□□□□ -0.89
LINC00339-204ENST00000434233 UQCC1Q9NVA1 299 aa9.49□□□□□ -0.89
LINC00339-204ENST00000434233 IGKV1D-37A0A075B6S9 117 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 IGHV4OR15-8A0A075B7B6 117 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 A0A087WW49 117 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 SMCO3A2RU48 225 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 LINC01619G3V211 115 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 BMPR1BO00238 502 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 TAAR5O14804 337 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 TRBV12-3P01733 135 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 IGLC1P0CG04 106 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 OR10J1P30954 320 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 ADMP35318 185 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 MYCNOSP40205 109 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 AP2S1P53680 142 aaPredicted RBP9.48□□□□□ -0.89
LINC00339-204ENST00000434233 YPEL3P61236 119 aaPredicted RBP9.48□□□□□ -0.89
LINC00339-204ENST00000434233 AKR1C1Q04828 323 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 ZFP69Q49AA0 526 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 TEPPQ6URK8 271 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 GPHB5Q86YW7 130 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 KCNRGQ8N5I3 272 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 TRGV9Q99603 122 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 ATP5SQ99766 215 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 CHRDL1Q9BU40 450 aa9.48□□□□□ -0.89
LINC00339-204ENST00000434233 PPP5D1E7EU14 171 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 CCL24O00175 119 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 IGKV1-17P01599 117 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 CXCL2P19875 107 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 ZP3P21754 424 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 EIF2B2P49770 351 aaKnown RBP9.47□□□□□ -0.89
LINC00339-204ENST00000434233 RELQ04864 619 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-204ENST00000434233 ZNF616Q08AN1 781 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 CLINT1Q14677 625 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 LGALSLQ3ZCW2 172 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-204ENST00000434233 TIGITQ495A1 244 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 OR4F17Q8NGA8 305 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 RAX2Q96IS3 184 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 OR4F4Q96R69 305 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 PARD6GQ9BYG4 376 aaPredicted RBP9.47□□□□□ -0.89
LINC00339-204ENST00000434233 SMIM3Q9BZL3 60 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 WFDC1Q9HC57 220 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 FBXL17Q9UF56 701 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 WDR83OSQ9Y284 106 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 LSM4Q9Y4Z0 139 aaKnown RBP9.47□□□□□ -0.89
LINC00339-204ENST00000434233 FBN1P35555 2871 aaKnown RBP9.47□□□□□ -0.89
LINC00339-204ENST00000434233 ATRQ13535 2644 aa9.47□□□□□ -0.89
LINC00339-204ENST00000434233 IGKV1OR2-108A0A075B7D4 117 aa9.46□□□□□ -0.9
LINC00339-204ENST00000434233 ZFP92A6NM28 416 aa9.46□□□□□ -0.9
LINC00339-204ENST00000434233 MPDU1O75352 247 aa9.46□□□□□ -0.9
LINC00339-204ENST00000434233 OR2C1O95371 312 aa9.46□□□□□ -0.9
LINC00339-204ENST00000434233 IFNA5P01569 189 aa9.46□□□□□ -0.9
LINC00339-204ENST00000434233 FABP1P07148 127 aa9.46□□□□□ -0.9
LINC00339-204ENST00000434233 RAB31Q13636 194 aa9.46□□□□□ -0.9
LINC00339-204ENST00000434233 FHL3Q13643 280 aa9.46□□□□□ -0.9
LINC00339-204ENST00000434233 RPEL1Q2QD12 228 aa9.46□□□□□ -0.9
LINC00339-204ENST00000434233 DEFB136Q30KP8 78 aa9.46□□□□□ -0.9
LINC00339-204ENST00000434233 FAM106AQ4KMX7 169 aa9.46□□□□□ -0.9
LINC00339-204ENST00000434233 BTNL8Q6UX41 500 aa9.46□□□□□ -0.9
LINC00339-204ENST00000434233 ZNF600Q6ZNG1 722 aa9.46□□□□□ -0.9
LINC00339-204ENST00000434233 Q8WTZ3 238 aa9.46□□□□□ -0.9
LINC00339-204ENST00000434233 WDR61Q9GZS3 305 aaKnown RBP9.46□□□□□ -0.9
LINC00339-204ENST00000434233 NDUFA4O00483 81 aa9.45□□□□□ -0.9
LINC00339-204ENST00000434233 TOMM40O96008 361 aa9.45□□□□□ -0.9
LINC00339-204ENST00000434233 CFDP00746 253 aaPredicted RBP9.45□□□□□ -0.9
LINC00339-204ENST00000434233 HOXD3P31249 432 aaPredicted RBP9.45□□□□□ -0.9
LINC00339-204ENST00000434233 SELENOTP62341 195 aa9.45□□□□□ -0.9
LINC00339-204ENST00000434233 KLF5Q13887 457 aaPredicted RBP9.45□□□□□ -0.9
LINC00339-204ENST00000434233 ZNF266Q14584 549 aa9.45□□□□□ -0.9
LINC00339-204ENST00000434233 CYP2G1PQ6ZSU1 146 aa9.45□□□□□ -0.9
LINC00339-204ENST00000434233 TMUB2Q71RG4 321 aa9.45□□□□□ -0.9
LINC00339-204ENST00000434233 SCGB1C1Q8TD33 95 aa9.45□□□□□ -0.9
LINC00339-204ENST00000434233 ARPC5LQ9BPX5 153 aa9.45□□□□□ -0.9
LINC00339-204ENST00000434233 BORCS7-ASMTA0A0B4J1R7 106 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 UBE2L5PA0A1B0GUS4 154 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 M0QZ24 198 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 LGALS9O00182 355 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 AGPAT2O15120 278 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 JTBO76095 146 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 RD3LP0DJH9 198 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 PSG1P11464 419 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 FGF7P21781 194 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 CAMLGP49069 296 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 ZNF90Q03938 601 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 SPATA3Q8NHX4 192 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 PPP1R14BQ96C90 147 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 ZNF414Q96IQ9 312 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 DUX3Q96PT4 197 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 MGST2Q99735 147 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 ARL6Q9H0F7 186 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 CYTL1Q9NRR1 136 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 SLC45A2Q9UMX9 530 aa9.44□□□□□ -0.9
LINC00339-204ENST00000434233 KANTRA0A1W2PQU2 76 aa9.43□□□□□ -0.9
LINC00339-204ENST00000434233 WI2-2373I1.2A0A1W2PRP0 233 aa9.43□□□□□ -0.9
LINC00339-204ENST00000434233 C17orf112F2Z3M2 114 aa9.43□□□□□ -0.9
LINC00339-204ENST00000434233 RPL29P47914 159 aaKnown RBP9.43□□□□□ -0.9
LINC00339-204ENST00000434233 SLURP1P55000 103 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms