RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 H7C1C5 153 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 J3QRK9 145 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 CLPSP04118 112 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 CSN2P05814 226 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 MGST1P10620 155 aaKnown RBP1.16□□□□□ -2.22
PTPN4-205ENST00000433888 NFYBP25208 207 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 SERPINB1P30740 379 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 G6PCP35575 357 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 LCN6P62502 163 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 ZNF345Q14585 488 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 MSMO1Q15800 293 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 NNATQ16517 81 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 LTC4SQ16873 150 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 LYRM7Q5U5X0 104 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 Q6ZQT0 140 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 AAED1Q7RTV5 226 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 TRAPPC6BQ86SZ2 158 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 OR4E2Q8NGC2 313 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 OR8B3Q8NGG8 313 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 OR10K1Q8NGX5 313 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 ZHX1-C8orf76Q96EF9 292 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 ZNF625Q96I27 306 aaPredicted RBP1.16□□□□□ -2.22
PTPN4-205ENST00000433888 HSPB9Q9BQS6 159 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 DOHHQ9BU89 302 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 PARVBQ9HBI1 364 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 CUL9Q8IWT3 2517 aa1.16□□□□□ -2.22
PTPN4-205ENST00000433888 MYO9BQ13459 2157 aa1.15□□□□□ -2.22
PTPN4-205ENST00000433888 RTEL1-TNFRSF6BF6WH68 1400 aa1.15□□□□□ -2.22
PTPN4-205ENST00000433888 KDM5BQ9UGL1 1544 aa1.15□□□□□ -2.22
PTPN4-205ENST00000433888 IGLV3-9A0A075B6K5 115 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 TMEM256-PLSCR3K7ERE1 68 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 K7ERJ3 54 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 M0R378 163 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 GPR31O00270 319 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 OVOL1O14753 267 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 IFNA7P01567 189 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 HTR1AP08908 422 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 CXCL1P09341 107 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 IDO1P14902 403 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 SRP14P37108 136 aaKnown RBP1.15□□□□□ -2.23
PTPN4-205ENST00000433888 EIF5AP63241 154 aaKnown RBP1.15□□□□□ -2.23
PTPN4-205ENST00000433888 RHOGP84095 191 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 DR1Q01658 176 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 POU6F1Q14863 301 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 RRN3P1Q2M238 152 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 DCUN1D2Q6PH85 259 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 ANGPTL5Q86XS5 388 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 DYNAPQ8N1N2 210 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 TMEM86AQ8N2M4 240 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 C11orf40Q8WZ69 217 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 SLAMF6Q96DU3 332 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 C2orf50Q96LR7 162 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 CARD19Q96LW7 228 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 LYSMD1Q96S90 227 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 CST9LQ9H4G1 147 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 CKLFQ9UBR5 152 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 SLC35A3Q9Y2D2 325 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 TONSLQ96HA7 1378 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 SCAF11Q99590 1463 aaKnown RBP1.15□□□□□ -2.23
PTPN4-205ENST00000433888 N4BP2Q86UW6 1770 aaPredicted RBP1.15□□□□□ -2.23
PTPN4-205ENST00000433888 NUP210LQ5VU65 1888 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 PCDH15Q96QU1 1955 aa1.15□□□□□ -2.23
PTPN4-205ENST00000433888 OBSL1O75147 1896 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 BAHCC1Q9P281 2608 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 NEO1Q92859 1461 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 EIF3AQ14152 1382 aaKnown RBP1.14□□□□□ -2.23
PTPN4-205ENST00000433888 TRBV19A0A075B6N1 114 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 RIIAD1A6NNX1 92 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 SDCBPO00560 298 aaPredicted RBP1.14□□□□□ -2.23
PTPN4-205ENST00000433888 IFNA21P01568 189 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 CRPP02741 224 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 C1QCP02747 245 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 CTSDP07339 412 aaPredicted RBP1.14□□□□□ -2.23
PTPN4-205ENST00000433888 RPSAP08865 295 aaKnown RBP1.14□□□□□ -2.23
PTPN4-205ENST00000433888 ASAH2BP0C7U1 165 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 RNASE4P34096 147 aaKnown RBP1.14□□□□□ -2.23
PTPN4-205ENST00000433888 FUSP35637 526 aaKnown RBP eCLIP1.14□□□□□ -2.23
PTPN4-205ENST00000433888 FXYD2P54710 66 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 TMBIM6P55061 237 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 TCTAP57738 103 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 ZNF846Q147U1 533 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 SMIM15Q7Z3B0 74 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 GRINAQ7Z429 371 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 DHFR2Q86XF0 187 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 PDZD9Q8IXQ8 264 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 C3orf56Q8N813 242 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 C15orf53Q8NAA6 179 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 ST6GALNAC3Q8NDV1 305 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 RMND5BQ96G75 393 aaPredicted RBP1.14□□□□□ -2.23
PTPN4-205ENST00000433888 Q96M85 177 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 GPER1Q99527 375 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 HIST1H2BLQ99880 126 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 SLC50A1Q9BRV3 221 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 PRADC1Q9BSG0 188 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 BIN3Q9NQY0 253 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 ACER3Q9NUN7 267 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 TOPBP1Q92547 1522 aa1.14□□□□□ -2.23
PTPN4-205ENST00000433888 A0A1B0GV72 72 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 DUXBA0A1W2PPF3 345 aa1.13□□□□□ -2.23
PTPN4-205ENST00000433888 MAP1LC3B2A6NCE7 125 aa1.13□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms