RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 SYNJ2BPP57105 145 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 FAM222AQ5U5X8 452 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 ZNF322Q6U7Q0 402 aaPredicted RBP4.37□□□□□ -1.71
PTPN4-203ENST00000430976 ZIC4Q8N9L1 334 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 CACNA1IQ9P0X4 2223 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 ATG2AQ2TAZ0 1938 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 PPLO60437 1756 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 CASZ1Q86V15 1759 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 TIMM17BO60830 172 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 GYPBP06028 91 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 TWIST1Q15672 202 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 MIC13Q5XKP0 118 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 BCL6BQ8N143 479 aaPredicted RBP4.37□□□□□ -1.71
PTPN4-203ENST00000430976 LINC00311Q8N616 119 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 DRAM1Q8N682 238 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 MRPL32Q9BYC8 188 aaKnown RBP4.37□□□□□ -1.71
PTPN4-203ENST00000430976 SHROOM3Q8TF72 1996 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 SCN2AQ99250 2005 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 COL3A1P02461 1466 aaPredicted RBP4.37□□□□□ -1.71
PTPN4-203ENST00000430976 MYOM1P52179 1685 aa4.37□□□□□ -1.71
PTPN4-203ENST00000430976 UBE2L6O14933 153 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 SS18L1O75177 396 aaPredicted RBP4.36□□□□□ -1.71
PTPN4-203ENST00000430976 RPS18P62269 152 aaKnown RBP4.36□□□□□ -1.71
PTPN4-203ENST00000430976 CEND1Q8N111 149 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 FAM57AQ8TBR7 257 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 GEMIN6Q8WXD5 167 aaKnown RBP4.36□□□□□ -1.71
PTPN4-203ENST00000430976 TMEM243Q9BU79 118 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 ZFAND3Q9H8U3 227 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 TMEM242Q9NWH2 141 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 H0YIZ8 118 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 CD8AP01732 235 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 SNRPGP62308 76 aaKnown RBP4.36□□□□□ -1.71
PTPN4-203ENST00000430976 FER1L6Q2WGJ9 1857 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 C1QL2Q7Z5L3 287 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 ZNF441Q8N8Z8 693 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 POP5Q969H6 163 aaKnown RBP4.36□□□□□ -1.71
PTPN4-203ENST00000430976 LSM10Q969L4 123 aaKnown RBP4.36□□□□□ -1.71
PTPN4-203ENST00000430976 MGST2Q99735 147 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 GLIPR2Q9H4G4 154 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 RBM12B-AS1Q9P1G2 102 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 TICRRQ7Z2Z1 1910 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 TRPM2O94759 1503 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 PITX3O75364 302 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 ATP5G1P05496 136 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 EFEMP1Q12805 493 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 C12orf74Q32Q52 190 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 TMEM75Q8N9X5 138 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 RPS4Y2Q8TD47 263 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 A0A1B0GUL6 1792 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 RGPD1P0DJD0 1748 aa4.36□□□□□ -1.71
PTPN4-203ENST00000430976 TRPM3Q9HCF6 1732 aaPredicted RBP4.36□□□□□ -1.71
PTPN4-203ENST00000430976 ASAH2BP0C7U1 165 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 TMEM187Q14656 261 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 STPG1Q5TH74 334 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 FAM90A2PQ658T7 463 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 TMEM99Q8N816 258 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 NABP2Q9BQ15 211 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 LIME1Q9H400 295 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 ICE1Q9Y2F5 2266 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 PRR32B1ATL7 298 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 C4orf51C9J302 202 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 FAM72CH0Y354 149 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 LEPROTL1O95214 131 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 IGKCP01834 107 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 SS18Q15532 418 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 FAM72AQ5TYM5 149 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 FAM72DQ6L9T8 149 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 FAM72BQ86X60 149 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 C18orf32Q8TCD1 76 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 RNF166Q96A37 237 aaPredicted RBP4.35□□□□□ -1.71
PTPN4-203ENST00000430976 AGMATQ9BSE5 352 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 THSD7AQ9UPZ6 1657 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 TULP4Q9NRJ4 1543 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 RGPD8O14715 1765 aaPredicted RBP4.35□□□□□ -1.71
PTPN4-203ENST00000430976 DLG5Q8TDM6 1919 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 SMIM26A0A096LP01 95 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 IGKV1D-16P01601 117 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 PLGLB1Q02325 96 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 ADIGQ0VDE8 80 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 OR2A5Q96R48 311 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 R3HDMLQ9H3Y0 253 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 SLC25A22Q9H936 323 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 KLK13Q9UKR3 277 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 MCM3APO60318 1980 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 Q1RN00 199 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 FAM78AQ5JUQ0 283 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 ZNF645Q8N7E2 425 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 AQP3Q92482 292 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 RNF126Q9BV68 326 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 GNB4Q9HAV0 340 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 HCSTQ9UBK5 93 aa4.35□□□□□ -1.71
PTPN4-203ENST00000430976 ZNF706Q9Y5V0 76 aaPredicted RBP4.35□□□□□ -1.71
PTPN4-203ENST00000430976 A0A1B0GVT2 93 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 SRRM4A7MD48 611 aaKnown RBP4.34□□□□□ -1.71
PTPN4-203ENST00000430976 F2Z2F3 143 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 C15orf65H3BRN8 121 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 SYS1-DBNDD2H3BUS1 97 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 K7ESM1 405 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 ZIC3O60481 467 aa4.34□□□□□ -1.71
PTPN4-203ENST00000430976 SRSF10O75494 262 aaKnown RBP4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms